NO02G00220, NO02G00220 (gene) Nannochloropsis oceanica

Overview
NameNO02G00220
Unique NameNO02G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2479
Alignment locationchr2:83375..85853 -

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger (CCCH-type/C3HC4-type RING finger) family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:83375..85853 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH
IPR001841Znf_RING
Homology
BLAST of NO02G00220 vs. NCBI_GenBank
Match: CBJ26758.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 303.9 bits (777), Expect = 7.900e-79
Identity = 143/237 (60.34%), Postives = 186/237 (78.48%), Query Frame = 0
Query:  115 YASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRD-LGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKK 351
            + SS +A P   AGGAT+ +EIDT+ DRD RA+LE  I++     EE      + +Y G AGY+N++ K+EAQIGGNK+TGTQGPIRAP++LRAT  FDY+PDICKDYKETGFCGFGD CKF+HDR+DYKSG+ +EQE+E ++K++++R+ LGEWA  E+EEE    YL++ DDDLPFAC +CR+GF DP+VT CGHYFC  CA +H+KT+P C ACG++T GVFN A KL EK++K
Sbjct:  123 FDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRL----NEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEREALGEWAEEENEEE----YLVESDDDLPFACLICRQGFVDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRK 351          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: XP_009839504.1 (hypothetical protein H257_13622 [Aphanomyces astaci] >ETV70841.1 hypothetical protein H257_13622 [Aphanomyces astaci])

HSP 1 Score: 248.1 bits (632), Expect = 5.200e-62
Identity = 127/243 (52.26%), Postives = 164/243 (67.49%), Query Frame = 0
Query:  127 AGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQ----RDLGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKKDEAKRKAVEEKDGQR 366
            AG ATY S+IDTE D+D RA+LE  IK+  +  +    L G KIY+GQAGY+NY  K EA IG NKYTGTQGPIRA ++ R+   FDY PDICKDYKETGFCG+GD CKFMHDR DYKSG+++++EW+ ++++K+Q    R+  +  G ED +  DD YLIK +DD  FAC +CR  F + V T+CGH+FC  CAL+ +K    C  C  +T GVFN A  L EK      K + +EE +  R
Sbjct:   75 AGDATYESQIDTEQDKDARAILEKNIKLNADGND----LSG-KIYQGQAGYKNYATKKEASIGMNKYTGTQGPIRAQTWARSICRFDYAPDICKDYKETGFCGYGDNCKFMHDRGDYKSGWQIDKEWDEKERKKKQALQGREPKDGLG-EDGDSDDDKYLIKSEDDEQFACTICRNPFTNAVETICGHFFCEKCALKRYKKSSLCFNCKRQTNGVFNVAKSLREK-----EKERVLEEMNSAR 306          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: OQR93101.1 (hypothetical protein THRCLA_08555 [Thraustotheca clavata])

HSP 1 Score: 241.9 bits (616), Expect = 3.700e-60
Identity = 126/245 (51.43%), Postives = 161/245 (65.71%), Query Frame = 0
Query:  106 AAKTSVLHTYASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEGDDAYLIKED-DDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMK 350
            AA+        S+  A     AG ATY  +IDTE DRD RALLE  IK+  E+ E          Y+G+AGY+NYV K E+Q+G NKYTGTQGPIRA ++ R+   FDY PD+CKDYKETGFCGFGD CKFMHDR DYKSG+++E+EWE +Q+RKR++ L E      +   D+ Y+IK D +D  FAC +CR+ F   V T+CGH+FC  CAL+ +K    C  C ++T GVFN A KL E+ K
Sbjct:   53 AAEVMDSRLQTSTRQAVRQTYAGDATYELQIDTEKDRDARALLEKNIKMNTEDNE-----ASGTFYQGKAGYKNYVTKKESQVGMNKYTGTQGPIRAQTWARSICRFDYAPDVCKDYKETGFCGFGDSCKFMHDRGDYKSGWQIEKEWE-EQERKRKQALAEGREFNSDGSDDEKYVIKSDEEDGQFACTICRQPFTRAVETLCGHFFCEDCALKRYKKTSLCFNCQKQTNGVFNVAKKLREQEK 291          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: OQR91129.1 (hypothetical protein ACHHYP_04965 [Achlya hypogyna])

HSP 1 Score: 240.7 bits (613), Expect = 8.200e-60
Identity = 125/247 (50.61%), Postives = 166/247 (67.21%), Query Frame = 0
Query:  116 ASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKKDEAKRKAVEEKD 363
            AS+  A     AG ATY  +IDTE DRD RALLE  IK+   +  EA G+     Y+G+AGY+NYV K E+Q G NKYTGTQGPIRA ++ R+   FDY PD+CKDYKETGFCGFGD CKFMHDR DYKSG+++++EW+ +++RK+Q+ L        +   D+ YLIK D+D  FAC +CR+ F + V T+CGH+FC +CAL+  K    C  C ++T GVFN A    +K+++ E  R A E+ D
Sbjct:   63 ASTRQAVRQTYAGDATYELQIDTEKDRDARALLEKNIKM-NADGNEASGV----FYQGKAGYKNYVTKKESQAGMNKYTGTQGPIRAQTWARSICRFDYAPDVCKDYKETGFCGFGDSCKFMHDRGDYKSGWQIDKEWD-EKERKKQQALAAGLSYNSDGSDDEKYLIKSDEDEQFACTICRQPFTNAVETLCGHFFCEACALKRFKKSSLCFNCQKQTNGVFNIA----KKLREAEQARLAEEQAD 299          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: CCA23479.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA26695.1 conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 238.8 bits (608), Expect = 3.100e-59
Identity = 118/244 (48.36%), Postives = 164/244 (67.21%), Query Frame = 0
Query:  117 SSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKKDEAKRKAVEE 361
            S     P   AG ATY ++IDTE DRD RA+LE  I + +     ++     K+Y+GQA Y+NY+ K+E+QIG NKYTGTQGPIRA ++ R+   FDY+PD+CKDYKETGFCGFGD CKF+HDR DYK G+++E+E++ +Q  +RQR L    G   +E  ++ YL+ +D D  FAC +CR+ F+D V T+CGH FC  CAL+H +    C  CG++T G FN A   +E  KK++ K+ + E+
Sbjct:   61 SERQVVPHVYAGDATYETQIDTEKDRDARAVLEKNILLNK---SGSIDDTSGKLYKGQAAYKNYIAKSESQIGMNKYTGTQGPIRAQTWARSICRFDYQPDVCKDYKETGFCGFGDTCKFLHDRGDYKGGWQIEKEYKEKQMAQRQRTL---QGKTLDEVDENEYLVSDDADEQFACTICRQPFQDAVKTICGHIFCEKCALKHFRKTSRCFNCGKQTNGAFNVA---WEIRKKEDKKKNSAED 295          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: XP_012209261.1 (hypothetical protein SPRG_14175 [Saprolegnia parasitica CBS 223.65] >KDO20027.1 hypothetical protein SPRG_14175 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 238.0 bits (606), Expect = 5.300e-59
Identity = 129/260 (49.62%), Postives = 171/260 (65.77%), Query Frame = 0
Query:  106 AAKTSVLHTYASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEG--DDAYLIKEDDDL-PFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKKDEAKRKAVEEKD 363
            AA+       AS+  A     AG ATY S+IDTE DRD RALLE  IK+  +  +    + G   Y+G+AGY+NYV K E+Q G NKYTGTQGPIRA ++ R+   FDY PD+CKDYKETGFCGFGD CKFMHDR DYKSG+++++EW+ ++++K+Q      AG E   +G  DD Y+IK DDD   FAC +CR+ F   V T+CGH+FC +CAL+ +K    C  C ++T GVFN A KL E+ +K   + +A +  D
Sbjct:   53 AAEIMDARLQASTREAVRQTYAGDATYESQIDTEKDRDARALLEKNIKLNADGND----ISG-TFYQGKAGYKNYVTKKESQAGMNKYTGTQGPIRAQTWARSICRFDYAPDVCKDYKETGFCGFGDSCKFMHDRGDYKSGWQIDKEWDEKERKKKQ---ALAAGLEYNSDGSDDDKYVIKSDDDEGQFACTICRQPFTKAVETLCGHFFCEACALKRYKKTSLCFNCKKQTNGVFNIAKKLREE-EKARLEEEAADHND 303          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: XP_009034140.1 (hypothetical protein AURANDRAFT_4131, partial [Aureococcus anophagefferens] >EGB11081.1 hypothetical protein AURANDRAFT_4131, partial [Aureococcus anophagefferens])

HSP 1 Score: 236.5 bits (602), Expect = 1.600e-58
Identity = 122/239 (51.05%), Postives = 163/239 (68.20%), Query Frame = 0
Query:  115 YASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEK-IYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRD----LGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPT-CPACGEKTGGVFNFAVKLFEK 348
            +ASS   AP    GGA    + DT+ D+D RALL    ++Q     EA     E  +Y+GQAGY++YV  NEAQIG NKYTGT+GPIRAPS++R T  FDY+PD+CKDYK+TGFCG+GD CKFMHDR DYK+G++LE E++ Q++R ++R+    LGE   S+DE E +   +    ++LPFAC LCR  F+DP++T CGHY+C+SCA  H +   T CP C ++T G+ N A KL  K
Sbjct:   13 FASSRDVAPVEHRGGAFAHQDFDTDKDQDARALLRRKFELQ-----EAGATNDETGLYQGQAGYKSYVKLNEAQIGANKYTGTKGPIRAPSFVRNTCRFDYQPDVCKDYKDTGFCGYGDSCKFMHDRGDYKTGWQLEAEYQRQKERDKEREMLGKLGE-PDSDDEREANKFRVGAGAEELPFACHLCRGPFKDPMMTTCGHYYCASCASSHFREKNTRCPICEKQTYGMLNAAPKLRAK 245          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: CCI50606.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 235.3 bits (599), Expect = 3.500e-58
Identity = 117/244 (47.95%), Postives = 162/244 (66.39%), Query Frame = 0
Query:  117 SSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKKDEAKRKAVEE 361
            S     P   AG ATY ++IDTE DRD RA++E  I + +     ++     K+Y+GQA Y+NY+ K+E+QIG NKYTGTQGPIRA ++ R+   FDY+PD+CKDYKETGFCGFGD CKF+HDR DYK G+++E+E+  +Q  +RQR +    G + +E  ++ YLI +DDD  FAC +CR+ F++ V T+CGH FC  CAL+  +    C  CG++T G FN A    E  +K+E K K  E+
Sbjct:   61 SERQVVPHVYAGDATYETQIDTEKDRDARAVMEKNISLNK---AGSIDDTSGKLYKGQAAYKNYIAKSESQIGMNKYTGTQGPIRAQTWARSICRFDYQPDVCKDYKETGFCGFGDTCKFLHDRGDYKGGWQIEKEYNEKQMTQRQRII---QGKKIDEVDENEYLISDDDDEQFACTICRQPFQNAVKTICGHIFCEKCALKQFRKTSRCFNCGKQTNGAFNVA---SEHRQKEEKKTKIAED 295          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: XP_024579139.1 (hypothetical protein, variant 1 [Plasmopara halstedii] >CEG42770.1 hypothetical protein, variant 1 [Plasmopara halstedii])

HSP 1 Score: 231.9 bits (590), Expect = 3.800e-57
Identity = 122/252 (48.41%), Postives = 169/252 (67.06%), Query Frame = 0
Query:  103 TXXAAKTSVLHTYASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKKDEAK 355
            T    KT ++    S     P   AG ATY ++I+TE DRD RA++E +IK  ++   +A      K+YRGQA Y+ YV K E+Q+G NKYTGTQGPIRA ++ RA + FDY+PDICKDYKETGFCG+GD CKF+HDRSDYK G+++E+E+  +Q++KRQ+ L +  G + +E+ +D  + K + +  FAC +CR  FR+ V T CGHYFC +CAL++ K    C  C ++T GVFN A KL  K ++  AK
Sbjct:  148 TKNVVKTQLIE---SEREVVPLKYAGDATYENQIETEKDRDARAVMERSIKANQDGSADA---DSGKVYRGQAAYKTYVTKMESQVGMNKYTGTQGPIRAQTWARAISRFDYQPDICKDYKETGFCGYGDSCKFLHDRSDYKGGWQIEKEF-MEQEKKRQKRLQD--GRDPDEQSEDEKITKNNVE-QFACTICRGPFRNAVKTCCGHYFCETCALRNFKKTSRCFNCKKQTNGVFNAAEKLRAKEREQCAK 389          
BLAST of NO02G00220 vs. NCBI_GenBank
Match: GAX93208.1 (Hypothetical protein PINS_001095, partial [Pythium insidiosum])

HSP 1 Score: 222.6 bits (566), Expect = 2.300e-54
Identity = 121/258 (46.90%), Postives = 154/258 (59.69%), Query Frame = 0
Query:   98 SKAGATXXAAKTSVLHTYASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSE-----------DEEEGDDAYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKL 345
            S AGA       +      S     P   AG ATY S+IDTE DRD RA+ E  +KV  +   +A      K+YRGQA Y+NY+ KNEAQIG NKYTGTQGPIRA ++ R+   FDY+PDICKDYKETGFCG+GD CKF+HDR DYKSG+++E+E+E +++RKRQ+ L +   +                              FAC +CRE FR+ V T+CGH+FC  CAL+H K    C  C ++T GVF  A KL
Sbjct:  329 STAGAARAKNVLAAAQQIDSERQLVPQKYAGDATYESQIDTEKDRDARAIAERNLKVNEDGTADA---ESGKVYRGQAAYKNYIKKNEAQIGMNKYTGTQGPIRAQTWARSICRFDYQPDICKDYKETGFCGYGDSCKFLHDRGDYKSGWQIEREYE-EKERKRQQRLKQGLDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFACTICREPFRNAVETLCGHFFCEQCALRHFKKSSRCFNCRKQTNGVFQAAEKL 582          
The following BLAST results are available for this feature:
BLAST of NO02G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ26758.17.900e-7960.34conserved unknown protein [Ectocarpus siliculosus][more]
XP_009839504.15.200e-6252.26hypothetical protein H257_13622 [Aphanomyces astac... [more]
OQR93101.13.700e-6051.43hypothetical protein THRCLA_08555 [Thraustotheca c... [more]
OQR91129.18.200e-6050.61hypothetical protein ACHHYP_04965 [Achlya hypogyna... [more]
CCA23479.13.100e-5948.36conserved hypothetical protein [Albugo laibachii N... [more]
XP_012209261.15.300e-5949.62hypothetical protein SPRG_14175 [Saprolegnia paras... [more]
XP_009034140.11.600e-5851.05hypothetical protein AURANDRAFT_4131, partial [Aur... [more]
CCI50606.13.500e-5847.95unnamed protein product [Albugo candida][more]
XP_024579139.13.800e-5748.41hypothetical protein, variant 1 [Plasmopara halste... [more]
GAX93208.12.300e-5446.90Hypothetical protein PINS_001095, partial [Pythium... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006597NSK006597Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00220.2NO02G00220.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G00220.1NO02G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|322175gene_10181Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101463g3gene25Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00220.2NO02G00220.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G00220.1NO02G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00220 ID=NO02G00220|Name=NO02G00220|organism=Nannochloropsis oceanica|type=gene|length=2479bp
CAGGCCATACGCACGCAGGCATGGCCGACAGCACAGGTGATGGCGGCGGC
GGAGAGGGGGGCAAGCCAGgtgagtcctaggtgaaaatcaagtccgtcgt
gtgtgctgcggctcgaatcacttcctccctccctcctccctctttccgtt
cccctcccttcctagTGTGCGTCTTCAAGAAACCCGTTTTCAAGAAGAAG
GGAGGAGCAGCAAAACAACAAAACAAACGGGCGCGAAAGCAGGCCAGCGA
CTCGGGCTCCGGCAGgtagggtagagatgaaggaaagaagggaggacagg
cgggcttgtctcagtacaagccttctcgcacactctcacacacgcatccc
ctacgcccttatactccccagCTCGGGCGACGACGAGGAAGAATCTGTTC
TATTAAGAAAGCAGCAAGCTAAAGGATCAAAAGCGGGGGCCACAGCCACC
GCCGCCAAGACTAGCGTCCTCCACACCTACGCCTCCTCGGGGAGTGCTGC
TCCTGCTCCTGTGGCTGGGGGCGCCACCTACACCAGTGAAATTGACACGG
AGCACGACAGAGACAACAGAGCGTTGTTAGAAATGGCCATTAAGGTCCAG
AGGGAGGAGGAGGAGGAAGCGGTCGGACTGGGGGGGGAGAAGATCTATAG
AGGACAGgtgaggagggcatcgagaaggaagggagggagggaggaaggga
gggagttgcctgaaattccacctcatctcagtcatccatgttctgatcgt
tctcaccttcttccttcctttcctttattcagGCGGGGTACCGAAATTAC
GTGCCTAAGAACGAGGCGCAGATTGGTGGGAATAAGTACACGGGGACGCA
Ggtgagagaggggaaaagggagggagggggccgaggaggtggatagacag
gggccgaacggctcaaaaggggagttgttaagggcccttcgttgtttgtg
ggctcaccctgcaaatggagcttccctgttctgcctttattgcctctttc
attctttgcgcacacccaccagaggctctgcccaccacaacttgacctca
ccactcacactcctccctccctctctccctccctccctccctccctccct
ccctctcccccatcccagGGCCCCATCCGTGCCCCCTCCTACTTGCGTGC
GACGGCCGTCTTCGACTACAAGCCCGACATCTGCAAGGACTACAAGGAAA
CGGGCTTCTGCGGCTTCGGgtacctccctccctccctccctccctccctc
cctccctcccttcaaccttcctttgattgctcctgacaccttcgccctcc
ctccctccctccctcttgcccgccctccctccctccctccctcagCGACG
GCTGCAAATTCATGCACGACCGAAGCGACTACAAGAGTGGGTATGAGCTG
GAGCAAGAGTGGGAAACGCAGCAGAAGAGGAAGCGACAACGgtaatgagg
aagggagggagggagggagcaaggagagatgaaggtctgtctgtcacgtc
acacttggaaactttgtcggaaacgttatcatccatcccctccctccctc
cctccttccctccctcccttcctccctcccccagCGACCTCGGGGAGTGG
GCCGGGTCAGAGGATGAGGAGGAGGGCGATGATGCCTACCTGATCAAGGA
GGATGACGACCTTCCTTTCGCTTGCTTCTTGTGCCGCGAGGgtgaggaag
gaagggaaagagggagggatggagggagggcggaagggagggagggggga
agatggcaaatatcagtttacaaacatgctattatttttgtcacacgctt
ttccgccgtccttccctccctccctccctccccccctcagGCTTCCGCGA
TCCGGTAGTGACGGTGTGTGGGCATTACTTCTGCTCATCATGCGCCCTCC
AACACCACAAGACGGACCCCACCTGCCCGGCCTGTGGGGAGAAGACAGgt
aggttagggcgaacggtgaagcgagcaagcaacctcgccctcctctcttc
cttccctccatccctctctccctcgattgatcgatctcttactcgtaggt
gggtcctggacggaatgaagcgttgctgagactcacacgaaaaaagtcgt
cgtctgttctgactcctgccctctctccctccttcctttctccctccttc
cctccctccctccttctttccctcctccagGCGGAGTCTTTAATTTTGCG
GTCAAGCTGTTCGAGAAGATGAAGAAGGACGAGGCGAAACGGAAGGCGGT
GGAGGAGAAGGACGGACAGCGGGCTGCTCTCGGGAAGGAGACGGTGGCGA
TCGCGGCCGCGAAGAGGAGGAAAAAGAAGAAGGAGGAGGAGGAGGCGGAG
GGGGTGGAAGGGGAGGGGGAGGGGGAGGAGGAGGAAGGGGGGGAGGAAGG
GGAGGAGGAGCTGGTGATTCAGGAGGAGGACAAAGACACGGTGGTGAAGA
AGAAGAAGGGGACCTGGAGCACCCTGTGA
back to top

protein sequence of NO02G00220.2

>NO02G00220.2-protein ID=NO02G00220.2-protein|Name=NO02G00220.2|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MAAAERGASQCASSRNPFSRRREEQQNNKTNGRESRPATRAPAGRVEMKE
RREDRRACLSTSLLAHSHTRIPYALILPSSGDDEEESVLLRKQQAKGSKA
GATATAAKTSVLHTYASSGSAAPAPVAGGATYTSEIDTEHDRDNRALLEM
AIKVQREEEEEAVGLGGEKIYRGQAGYRNYVPKNEAQIGGNKYTGTQGPI
RAPSYLRATAVFDYKPDICKDYKETGFCGFGDGCKFMHDRSDYKSGYELE
QEWETQQKRKRQRDLGEWAGSEDEEEGDDAYLIKEDDDLPFACFLCREGF
RDPVVTVCGHYFCSSCALQHHKTDPTCPACGEKTGGVFNFAVKLFEKMKK
DEAKRKAVEEKDGQRAALGKETVAIAAAKRRKKKKEEEEAEGVEGEGEGE
EEEGGEEGEEELVIQEEDKDTVVKKKKGTWSTL*
back to top

protein sequence of NO02G00220.1

>NO02G00220.1-protein ID=NO02G00220.1-protein|Name=NO02G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MADSTGDGGGGEGGKPVCVFKKPVFKKKGGAAKQQNKRARKQASDSGSGS
SGDDEEESVLLRKQQAKGSKAGATATAAKTSVLHTYASSGSAAPAPVAGG
ATYTSEIDTEHDRDNRALLEMAIKVQREEEEEAVGLGGEKIYRGQAGYRN
YVPKNEAQIGGNKYTGTQGPIRAPSYLRATAVFDYKPDICKDYKETGFCG
FGDGCKFMHDRSDYKSGYELEQEWETQQKRKRQRDLGEWAGSEDEEEGDD
AYLIKEDDDLPFACFLCREGFRDPVVTVCGHYFCSSCALQHHKTDPTCPA
CGEKTGGVFNFAVKLFEKMKKDEAKRKAVEEKDGQRAALGKETVAIAAAK
RRKKKKEEEEAEGVEGEGEGEEEEGGEEGEEELVIQEEDKDTVVKKKKGT
WSTL*
back to top
Synonyms
Publications