NO01G05880, NO01G05880 (gene) Nannochloropsis oceanica

Overview
NameNO01G05880
Unique NameNO01G05880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4839
Alignment locationchr1:1653181..1658019 +

Link to JBrowse

Properties
Property NameValue
DescriptionGtp cyclohydrolase ii
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1653181..1658019 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036144RibA-like_sf
IPR032677GTP_cyclohydro_II
IPR022163GTP_CH_N
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO01G05880 vs. NCBI_GenBank
Match: EWM22810.1 (gtp cyclohydrolase ii [Nannochloropsis gaditana])

HSP 1 Score: 590.1 bits (1520), Expect = 6.200e-165
Identity = 278/301 (92.36%), Postives = 290/301 (96.35%), Query Frame = 0
Query:    1 MQGISTLGKRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            M GISTLGKRRSS+DE+TIPEPDLAK ECYTLTTHDQQFGSDPIPM WGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVA G LDPYYKP+FENTTPVAKIGPFPQWW+HHKIVAMDPFGHVTQEAF AYLRKGFDIRPTIAVTKAHIELSEI +AM+LGRL  DG VLTK+GQVNVTKAAIEP WYLPAVAERFSV+EAKLRETLFVETNMMYPELITRPD+KVFLPPIGGSTVYIFGDPEKIPDE+VPLTARVHDECNGSDVFGSDICTCRPYLIHAIEEC++TAVEGGTG
Sbjct:   24 MHGISTLGKRRSSIDESTIPEPDLAKPECYTLTTHDQQFGSDPIPMKWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVAAGALDPYYKPRFENTTPVAKIGPFPQWWAHHKIVAMDPFGHVTQEAFSAYLRKGFDIRPTIAVTKAHIELSEISQAMKLGRLHADGNVLTKDGQVNVTKAAIEPVWYLPAVAERFSVSEAKLRETLFVETNMMYPELITRPDIKVFLPPIGGSTVYIFGDPEKIPDENVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECVRTAVEGGTG 324          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: XP_005854470.1 (gtp cyclohydrolase ii [Nannochloropsis gaditana CCMP526] >EKU21887.1 gtp cyclohydrolase ii [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 491.5 bits (1264), Expect = 3.000e-135
Identity = 251/364 (68.96%), Postives = 261/364 (71.70%), Query Frame = 0
Query:    1 MQGISTLGKRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMK---------------------------------------------------------------VFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            M GISTLGKRRSS+DE+TIPEPDLAK ECYTLTTHDQQFGSDPIPM WGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVA G LDPYYKP+FENTTPVAKIGPFPQWW+HHKIVAMDPFGHVTQ                               AM+LGRL  DG VLTK+GQVNVTKAAIEP WYLPAVAERFSV+EAKLRETLFVETNMMYPELITRPD+K                                                               VFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEEC++TAVEGGTG
Sbjct:    1 MHGISTLGKRRSSIDESTIPEPDLAKPECYTLTTHDQQFGSDPIPMKWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVAAGALDPYYKPRFENTTPVAKIGPFPQWWAHHKIVAMDPFGHVTQ-------------------------------AMKLGRLHADGNVLTKDGQVNVTKAAIEPVWYLPAVAERFSVSEAKLRETLFVETNMMYPELITRPDIKVTPSYELLEMLWHPSPTALSTLRSLLCRSYPFFPPSHRIFASIRLHSLRHSSTLPSLPLPLHQVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECVRTAVEGGTG 333          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: EJK71165.1 (hypothetical protein THAOC_07418 [Thalassiosira oceanica])

HSP 1 Score: 409.5 bits (1051), Expect = 1.500e-110
Identity = 186/293 (63.48%), Postives = 223/293 (76.11%), Query Frame = 0
Query:    9 KRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            K+R S++E +IP P+  K +   LT+H   FG DPIP++WG  DP VRGP++ T RH SQRNAIGAHSGSYC+Y  LAVA G L+P Y P  + T+PV  IGP   W+   KI ++DPFGH+T + + +YL KGFDIRPTIA+TKAHI+L E  EA++ GRL PDGKVL   GQ  V+KAAIEP WYLP +A RF  TE  LR+++F  TN MYPELITRPD+K+FLPPIGG T+YI+GDP+ IPDE + LT RVHDECNGSDVFGSDICTCRPYL HAIEECIKTA  GG G
Sbjct:   11 KKRKSIEEDSIPTPEFTKLDHINLTSHSGTFGVDPIPVSWGHPDPLVRGPVICTVRHSSQRNAIGAHSGSYCVYTGLAVAAGKLNPEYVPNLKLTSPVFDIGPHSSWYDPKKIASIDPFGHLTTDVYSSYLNKGFDIRPTIAITKAHIDLPETREAVQSGRLKPDGKVLLPSGQSIVSKAAIEPVWYLPEIARRFGCTETTLRQSIFQMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIKTAQRGGAG 303          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: XP_002289799.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93336.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 401.7 bits (1031), Expect = 3.100e-108
Identity = 189/293 (64.51%), Postives = 220/293 (75.09%), Query Frame = 0
Query:    9 KRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            K+R+  D+  IP P++   +   LT+H   FG DP+P++WG  DP VRGP++ T RH SQRNAIGAHSGSYCIY  LAVA G L+P Y P  + T+PV KIGP   W    KI ++DPFG VT E FGAYL KGFDIRPTIAVTKAHI+L E  EA+  GRL PDGK+L   GQ  V+KAAIEP WYLP +A RF  TE  LR+++F  TN MYPELITRPD+K+FLPPIGG T+YI+GDP+ IPDE + LT RVHDECNGSDVFGSDICTCRPYL HAIEECIKTA  GG G
Sbjct:   10 KQRTEQDD-GIPVPEITSVDYVNLTSHTDSFGVDPLPISWGHPDPLVRGPVICTVRHSSQRNAIGAHSGSYCIYTGLAVAAGKLNPDYVPNLKLTSPVFKIGPHKSWSDPKKISSIDPFGAVTTEVFGAYLDKGFDIRPTIAVTKAHIDLPETREAIAKGRLVPDGKILLPTGQSIVSKAAIEPVWYLPEIARRFGCTETVLRQSIFRMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIKTAQRGGCG 301          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: OEU18585.1 (hypothetical protein FRACYDRAFT_207039 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 396.7 bits (1018), Expect = 1.000e-106
Identity = 183/283 (64.66%), Postives = 211/283 (74.56%), Query Frame = 0
Query:   19 IPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            IPEP+    +   LTTH   FGSDPIP++W   DP +RGP++ T RH +QRNAIGAH GSYCIY  LAVA G LDP Y P    T+PV KIGP+P W    KI A+DPFGH+T  A+  YL KG+DIRPTIAVTKAHI+L E  EA+  GRL  DGK+L   GQ   +KAAIEP WYLP +A RF  TE+ LR ++F  TN MYPELITRPD+K+FLPPIGG T+YI+GDPE IPDE + LT RVHDECNGSDVFGSDICTCRPYL HAIEECI+TA  GG G
Sbjct:   51 IPEPEFTTVDHIPLTTHTDSFGSDPIPVSWSHPDPLIRGPVICTVRHSAQRNAIGAHQGSYCIYTGLAVAAGKLDPDYVPDLRLTSPVFKIGPYPSWSDPKKISALDPFGHLTTTAYKDYLDKGWDIRPTIAVTKAHIDLPECREAVATGRLKADGKILLPSGQSICSKAAIEPVWYLPEIARRFQTTESNLRRSIFRMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPETIPDEDIELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIRTAQNGGCG 333          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: XP_002176616.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51079.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 393.7 bits (1010), Expect = 8.500e-106
Identity = 188/315 (59.68%), Postives = 223/315 (70.79%), Query Frame = 0
Query:    9 KRRSS--MDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTI--------------------AVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            K RSS   +E  IP P++ +A+  TLT+H   FG DPIP++WG  DP VRGP++ T RH +QRNAIGAH GSYC+Y  LAVA G LDP Y P    T+PV +IGP+P W    KI A+DPFGH+T +A+G +L KG+DIRPTI                    AVTKAHI+L E  EA+  GRL PDGK+L   GQ  V KAAIEP WYLP +A RF  TE  LR+++F  TN MYPELITRPD+K+FLPPIGG T+YI+GDP  IPDE + LT RVHDECNGSDVFGSDICTCRPYL HAIEECI+TA +GG G
Sbjct:   35 KPRSSERKEEDGIPLPEVTQADLITLTSHPDAFGVDPIPISWGHPDPAVRGPVICTVRHSAQRNAIGAHQGSYCVYTGLAVAAGKLDPSYVPNLSLTSPVFQIGPYPSWSDPKKISALDPFGHLTTDAYGDWLEKGWDIRPTITWKDLLIVPHEMALNVFNFQAVTKAHIDLPECREAIATGRLVPDGKILLSSGQSIVAKAAIEPVWYLPELARRFQTTETNLRQSIFRMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPATIPDEDIELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIRTAQKGGCG 349          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: XP_024579271.1 (gtp cyclohydrolase ii [Plasmopara halstedii] >CEG42902.1 gtp cyclohydrolase ii [Plasmopara halstedii])

HSP 1 Score: 390.6 bits (1002), Expect = 7.200e-105
Identity = 187/307 (60.91%), Postives = 224/307 (72.96%), Query Frame = 0
Query:    1 MQGISTLGKRRSSMDETTIPEPDLAKAE------CYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            M+ +STLGKR+ S+D   + + D  K E        +LT+H +QFG +PI + WG ++P+VRGPI+ T RH   RNAIGAH GSYCIY+ LAVA+G +    KP    TTP AKIGP P W    KIV +DPFG    EAF  Y + G+DIRPTIAVTKAH++  EIHEA+RLGRL PDGKVLTK  Q+ +TKAAI+P WYLP VA+RF+ TEA LR+ +F ETN MYPEL+TR D+K+FLPPIGG T+YIFG  E I D S  L  RVHDECNGSDVFGSDICTCRPYL H IE C++TA EGGTG
Sbjct:    1 MKKVSTLGKRKKSIDADNVKKID-KKDEFDPNQFYVSLTSHAEQFGVEPIRVRWGHKEPDVRGPIIGTNRHHKYRNAIGAHGGSYCIYRGLAVASGAIVKNAKPDLSETTPAAKIGPHPSWADPEKIVTIDPFGACVVEAFPEYYQNGYDIRPTIAVTKAHMDFPEIHEAVRLGRLKPDGKVLTKSSQLVITKAAIDPVWYLPGVAKRFNTTEANLRQQIFQETNGMYPELVTRNDLKIFLPPIGGLTIYIFGSVEAISDPSKKLAVRVHDECNGSDVFGSDICTCRPYLSHGIEVCVQTAQEGGTG 306          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: XP_009038912.1 (hypothetical protein AURANDRAFT_72017 [Aureococcus anophagefferens] >EGB06333.1 hypothetical protein AURANDRAFT_72017 [Aureococcus anophagefferens])

HSP 1 Score: 387.5 bits (994), Expect = 6.100e-104
Identity = 190/300 (63.33%), Postives = 217/300 (72.33%), Query Frame = 0
Query:    5 STLGKRRSSMDETTIPEPDLAKAECYT---LTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            + LG  R       IP+    ++   T   LTTHD  FG  P  +AWGE+    RGP++ATTRH  QRNAIGAH+G Y IY+ALAVA+G LD    PK   TTP AKIGP   W +  +IV MDP+GH   E FG +L KG+D+RPTIA+TKAH+EL E  EA+R GRL PDG +L + G   VTKAAIEP WYLP VAERF V+E  LR+ LF ETN MYPELI+R D+KVFLPPIGG TVYI+GD EKIPDESV LT RVHDECNGSDVFGSDICTCRPYL HAIEECIKTA  GGTG
Sbjct:  538 AVLGDMRGDAPPADIPDAMQCESLDETATQLTTHDGTFGPQPCHLAWGEKSSVARGPVLATTRHTFQRNAIGAHAGGYSIYRALAVASGGLDQAAMPKLGLTTPAAKIGPHLSWKNPKRIVTMDPWGHAISEGFGPWLNKGYDVRPTIAITKAHVELPECKEALRSGRLVPDGDILEESGTSVVTKAAIEPVWYLPGVAERFGVSERVLRDALFAETNSMYPELISRDDLKVFLPPIGGMTVYIWGDVEKIPDESVELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIKTAQRGGTG 837          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: GAX20608.1 (hypothetical protein FisN_3Hh541 [Fistulifera solaris])

HSP 1 Score: 386.7 bits (992), Expect = 1.000e-103
Identity = 179/292 (61.30%), Postives = 208/292 (71.23%), Query Frame = 0
Query:   10 RRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            R    ++  IP PD   ++   LT+H   FG DP+P++WG  DP VRGP++ T  H SQRNAIGAH GSYCIY  LAVA   LDP Y P    T+PV  IGP P W    KI ++DPFGH+  + +G +L KG+DIRPTIAVTKAHI+L E  E +  GRL PDGK+L   GQ  V KAAIEP WYLP +A RF  TE  LR ++F  TN MYPELITRPD+K+FLPPIGG T+YI+GDP  IPDE + LT RVHDECNGSDVFGSDICTCRPYL HAIEECIKTA  GG G
Sbjct:   36 RTEHHEQDGIPIPDFHDSDHIQLTSHPDAFGVDPVPISWGHPDPRVRGPVICTVTHSSQRNAIGAHQGSYCIYTGLAVAANKLDPNYVPDLSLTSPVFPIGPHPAWSDPKKIGSIDPFGHIVTQCYGDWLEKGWDIRPTIAVTKAHIDLPECREGVASGRLIPDGKILLSSGQSVVAKAAIEPVWYLPEIARRFQTTETHLRHSIFRMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPATIPDEDIELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIKTAQRGGCG 327          
BLAST of NO01G05880 vs. NCBI_GenBank
Match: GAX10334.1 (hypothetical protein FisN_3Lh541 [Fistulifera solaris])

HSP 1 Score: 386.3 bits (991), Expect = 1.400e-103
Identity = 179/292 (61.30%), Postives = 208/292 (71.23%), Query Frame = 0
Query:   10 RRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGEEDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKFENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIAVTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVAERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPEKIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGTG 302
            R    ++  IP PD   ++   LT+H   FG DP+P++WG  DP VRGP++ T  H SQRNAIGAH GSYCIY  LAVA   LDP Y P    T+PV  IGP P W    KI ++DPFGH+  + +G +L KG+DIRPTIAVTKAHI+L E  E +  GRL PDGK+L   GQ  V KAAIEP WYLP +A RF  TE  LR ++F  TN MYPELITRPD+K+FLPPIGG T+YI+GDP  IPDE + LT RVHDECNGSDVFGSDICTCRPYL HAIEECIKTA  GG G
Sbjct:   40 RTEHHEQDGIPIPDFHDSDHIQLTSHPDAFGVDPVPISWGHPDPRVRGPVICTVTHSSQRNAIGAHQGSYCIYTGLAVAANKLDPNYVPDLSLTSPVFPIGPHPAWSDPKKIGSIDPFGHIVTQCYGDWLEKGWDIRPTIAVTKAHIDLPECREGVASGRLIPDGKILLPSGQSVVAKAAIEPVWYLPEIARRFQTTETHLRHSIFRMTNGMYPELITRPDIKIFLPPIGGLTIYIWGDPATIPDEDIELTCRVHDECNGSDVFGSDICTCRPYLTHAIEECIKTAQRGGCG 331          
The following BLAST results are available for this feature:
BLAST of NO01G05880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22810.16.200e-16592.36gtp cyclohydrolase ii [Nannochloropsis gaditana][more]
XP_005854470.13.000e-13568.96gtp cyclohydrolase ii [Nannochloropsis gaditana CC... [more]
EJK71165.11.500e-11063.48hypothetical protein THAOC_07418 [Thalassiosira oc... [more]
XP_002289799.13.100e-10864.51predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU18585.11.000e-10664.66hypothetical protein FRACYDRAFT_207039 [Fragilario... [more]
XP_002176616.18.500e-10659.68predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_024579271.17.200e-10560.91gtp cyclohydrolase ii [Plasmopara halstedii] >CEG4... [more]
XP_009038912.16.100e-10463.33hypothetical protein AURANDRAFT_72017 [Aureococcus... [more]
GAX20608.11.000e-10361.30hypothetical protein FisN_3Hh541 [Fistulifera sola... [more]
GAX10334.11.400e-10361.30hypothetical protein FisN_3Lh541 [Fistulifera sola... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR008ncniR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006438NSK006438Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614866gene_11736Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100250g5gene7635Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05880.1NO01G05880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05880.2NO01G05880.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05880.3NO01G05880.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05880.4NO01G05880.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05880.1NO01G05880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05880.2NO01G05880.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05880.3NO01G05880.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05880.4NO01G05880.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05880 ID=NO01G05880|Name=NO01G05880|organism=Nannochloropsis oceanica|type=gene|length=4839bp
CAGGCAGGAAAGAGACAAACGACAAGAATACAGCACAACACGAAGGCATC
AACCAAGCCAGCAAAAACCCGTCGCAGCGTCGAACCACCCAAAGGACCAT
GCAAGGCATCTCCACTCTCGGCAAGCGCCGGAGCTCCATGGATGgtgcgt
aagggctgtagaagagagggtggctcggagggagtatggagaattgagga
tttggtcgttagaggcctcatgttatggggtgtcttgattctcctataaa
attgtagggccccacccatctcgaagcgcctcctatgccgcttatccttc
ggataatctctaccttcagccgcttccctgttttatgttgccctttccct
cttacttttcttcccttccatgttgacccattaaccctcagAGACGACCA
TCCCGGAGCCCGACTTGGCCAAGGCCGAGTGCTACACCCTCACCACGCAC
GATCAGCAGTTTGGATCCGATCCCATCCCCATGGCGgtacgtgataagga
attacggaagaggagggaagtccatgagggatcgatgagccttgaatgtg
atgtgacgtgagcattccccgtctctttcatttaagatgcagcagtttgt
catcatcgtcaacggccatctcaaccccttagattcatctccctttttct
catcctctctcctctcaatcggtctcacagTGGGGCGAGGAAGACCCCGA
GGTCCGAGGCCCCATCGTGGCCACCACCCGCCACCAGAGCCAGgtagggg
tggagggaggaaatgaagaatggagagcaaaggcggacctggcgtgcggg
aaagcctgggcgttattcttattctcgtattcgcggggtgattgttgtca
cattcctccccacacccacacgcacagCGGAATGCCATAGGTGCCCACTC
AGGCTCGTACTGCATCTACAAGgtcaggagccattccccccccctcctcc
ctcccgccctccctccctctcacctcctccttcctccaacagGCCCTCGC
CGTGGCAACCGGCTTGCTTGATCCTTACTACAAGCCCAAGTTCGAGAACA
CTACGCCCGTGGCCAAAATCGGGCCCTTCCCTCAGTGgtaagggaaggag
ggagggagggagggaagcagggacaggctcagaagaaaagaggcttgtac
ttccttcttgtatgcctgtgctcatcgcccttccctctctcccattattt
cttccttactgtgctctccatggctcccgatccagGTGGTCGCACCACAA
AATCGTGGCCATGGACCCTTTCGGGCACGTCACGCAGgtacggggggaaa
gagggagggagggaggaggggggggaaacgataggacggacggacggaac
ggaaagggcgagtgccgatcctttgtccttgacgccattctcacgcttta
tctctctctttccatctcccgtttccatagGAGGCTTTCGGGGCGTACTT
GCGAAAGGGATTCGACATCCGCCCCACAATCGCCGTGACTAAGgtagagg
gggagggaggaagagggaagggaagagggaagtccgaatcatgcgcatgc
ggttgaagccctccctttgatctctgtccttgctgtcgttcgccggcttg
tcctctctttgctctatttgccctctctttcctccctctttcttccctca
tttcccttcccttaaccgtcggccacctcgtccatcgtcccagGCGCACA
TCGAGCTCTCGGAGATCCACGAGgtatgtcggccgcccttccctccttcc
ctccttcccttcctccccccttcctctcactcctctccggcctctttttc
cccagGCCATGCGCCTGGGCCGGCTGGCTCCGGACGGGAAGGTGCTCACC
AAAGAAGGGCAGGTCAACGTGACCAAGgtaacggccagagagggagggag
ggagggagggttgtggaccctcgacctatgcgacgagtggcacgtcattt
cttcgtctactcacctccctcccacactccctcccttccttcctccctcc
ttccctcctaatcctcttcctcctcgcctcccagGCGGCCATCGAGCCCG
CGTGGTACCTGCCGGCCGTGGCGGAGCGTTTCAGTGTAACGGAGGCCAAG
TTGCGGGAAACGCTCTTCGTCGAGACGAATATGATGTATCCCGAGCTCAT
CACACGCCCCGACATGAAGgtagagatggaaggcgccacctggcttttcc
accctccctcccgcccttaacccctccctctctccctccctgttggacct
catcgtacgcgccgatatggaagcatgctcggcggcgacaccttccctcc
ttctctccatcctttccgtcctccacccctccctccacccctccctcctc
acttccccattaacttccctctccccccctcagGTGTTCCTGCCCCCCAT
CGGCGGGAGCACAGTCTACATCTTCGGAGACCCCGAGAAAATCCCCGACG
AGTCCGTCCCTCTCACCGCCCGCGTCCACGACGAGTGCAACGgtacgcgt
ctgtctggcaccacggtcaggcctgcattttctccctccctctctccctc
cctccactgcttcctccaatgcttccatcttcctgtcgggtgctgcctgt
gatccgctacactcccttgatttctccttcatgcgtcctacccctccctc
cctccctccctccctccctccctcctccagGCTCGGACGTATTTGGCTCT
GACATCTGCACATGCCGACCCTACCTGATCCACGCCATCGAGGAGTGCAT
CAAGACGGCCGTGGAGGGGGGCACTGgtagaatggagggggagaggagct
gggacagaaggaagcaagcggggagggagggagggagggaggcaagggcg
gaaaacctcgtctgcgtcatccgtccgccatgcggtatctcttactcata
ctcacatccaccttctgtttcccctttcctccctccctcccccctccctt
tctgctcctgctcctgcttctccgcctgctcctgctcccgctcctgctcc
gcttgctgctgctgctgccgctgctgcagGTGTAATTGTCTACTACCGGA
AGGAGGGGCGGGCTCTGGGCGAGGTAACCAAATACCTCGTCTACAATATG
CGCAAACGCCGAGAAGgtgcgcgggtcctcctttcctctccctccccctc
cctccctccctccctcgcactttttctccttcatgggggccttgagaaat
tggtcgtctttttccaccgacccttcctccctccctccctccctccctcc
tttcctccctccctccctcccttccctcccactggtccagGCGGCGACCG
TGCAGACGAGTACTTCAACTGTACGCAGCACGTGGCCGGCATCACCGATA
CACGCTTCCAGgtacggagggagggagggaggaggaaagggagggagggg
acactgactgagcaggggtcggcgtgttgaaacctcattcccgtcaattg
gtcctcaaccccgtctcccctctcccctttctccctccttccctccctcc
ctcccaccttccctcccacccaccctccctccctccctccctccctccct
ccctccgtgcctccctcccttcccgccccgtctcccctctcccctccctc
cctccgtgcctccctccctctccgccccccccacgcccagGCCCTCATGC
CCGACCCGCTGCACTGGCTGGGCGTGACCCGGATCCACCGCTTCATCTCC
ATGTCCGATATGAAGgtgcgcgcagcaattaatcaaggagggaaggagag
agggaaaggaaaagaggggccagctaacggggtgcctgagggcggcaggt
gcacgcggtggacggcagcagcgggtaattgagggcacggcatttatagt
ccattaccctggttcacttcactccctccatccctccccctcttcctccc
ttccaccctcctcatcccccccccagTACGAGGCCATCACCAAGAGCGGC
ATTACCATCGACGAGCGCGTGCCCATCCCTCCCGAGCTCGTGCCTAAGGA
CGCGGGCGTCGAGATCGCAGCCAAGgtgaggaggagaaaggggagaaagg
gaaggagggagaaacgaaggataaaggacgggggcaggaaaagatacgtg
gagaaataatggcgttgtgcgtagtgcgatcatatatttcatagggacga
gtcgcctcgtctctgcaagtactgctgctgccgttgctgctgcttgctgc
tggtgttaatatggcttccctcccgttgaccggcttttcagcagcttttc
actcatttctccctctctacatccttcattccccccctccctgcttgcat
tctgctgctgccactgctgctgctactgctgccagGTGTTTGCGGGCTAC
GACGGCGGGAGTTCCTACACCGTGCCATCCAAGGAGGACCTGTCCAAGGT
CATGGGCCGCGCCTTCTCCTCCTAGGCAGCCAGCTATAGACGTAGACGCA
TACTCCCACACCTGCACGCGCCATAACGACATTTATGTATACATGTTAAA
AACTGTGGCTTTCGTGGACAGGTGGGAAGTGGCGGGTGGGGGTGAGGTGG
TTTTGGGTGCTTTGGGAGCGGGAACGTAATCTAGCCTAGGTAGTATATCA
AGAAGGGAAGGAATGGGAGGAGTAAGGGTAGAAGAGCAAGAAGCCTGGAA
GGCTTTCAGATGGTTGTGTAGAAAAATTGCATTGAGGTGAGGATGGGTTC
CCGAGGGAGGGGGCAGAGGAGGAGGAAGAAGAGGAGCAGCAGCGAAGGAG
GGAGGAGCATGAGTTGATGGTAATAGACAAGGGTGAAGCACAGAGAGCAG
GTCCGCAAAAAGATTAAGGATAATTGAGTTATAGCAGCA
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protein sequence of NO01G05880.1

>NO01G05880.1-protein ID=NO01G05880.1-protein|Name=NO01G05880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=441bp
MQGISTLGKRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGE
EDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKF
ENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIA
VTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVA
ERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPE
KIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGT
GVIVYYRKEGRALGEVTKYLVYNMRKRREGGDRADEYFNCTQHVAGITDT
RFQALMPDPLHWLGVTRIHRFISMSDMKYEAITKSGITIDERVPIPPELV
PKDAGVEIAAKVFAGYDGGSSYTVPSKEDLSKVMGRAFSS*
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protein sequence of NO01G05880.2

>NO01G05880.2-protein ID=NO01G05880.2-protein|Name=NO01G05880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MQGISTLGKRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGE
EDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKF
ENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIA
VTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVA
ERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPE
KIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGT
GRMEGERSWDRRKQAGREGGREARAENLVCVIRPPCGISYSYSHPPSVSP
FLPPSPLPFCSCSCFSACSCSRSCSACCCCCRCCRCNCLLPEGGAGSGRG
NQIPRLQYAQTPRRRRPCRRVLQLYAARGRHHRYTLPGPHARPAALAGRD
PDPPLHLHVRYEGARSN*
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protein sequence of NO01G05880.3

>NO01G05880.3-protein ID=NO01G05880.3-protein|Name=NO01G05880.3|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MQGISTLGKRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGE
EDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKF
ENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIA
VTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVA
ERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPE
KIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGT
GRMEGERSWDRRKQAGREGGREARAENLVCVIRPPCGISYSYSHPPSVSP
FLPPSPLPFCSCSCFSACSCSRSCSACCCCCRCCRCNCLLPEGGAGSGRG
NQIPRLQYAQTPRRRRPCRRVLQLYAARGRHHRYTLPGPHARPAALAGRD
PDPPLHLHVRYEVRGHHQERHYHRRARAHPSRARA*
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protein sequence of NO01G05880.4

>NO01G05880.4-protein ID=NO01G05880.4-protein|Name=NO01G05880.4|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MQGISTLGKRRSSMDETTIPEPDLAKAECYTLTTHDQQFGSDPIPMAWGE
EDPEVRGPIVATTRHQSQRNAIGAHSGSYCIYKALAVATGLLDPYYKPKF
ENTTPVAKIGPFPQWWSHHKIVAMDPFGHVTQEAFGAYLRKGFDIRPTIA
VTKAHIELSEIHEAMRLGRLAPDGKVLTKEGQVNVTKAAIEPAWYLPAVA
ERFSVTEAKLRETLFVETNMMYPELITRPDMKVFLPPIGGSTVYIFGDPE
KIPDESVPLTARVHDECNGSDVFGSDICTCRPYLIHAIEECIKTAVEGGT
GRMEGERSWDRRKQAGREGGREARAENLVCVIRPPCGISYSYSHPPSVSP
FLPPSPLPFCSCSCFSACSCSRSCSACCCCCRCCRCNCLLPEGGAGSGRG
NQIPRLQYAQTPRRRRPCRRVLQLYAARGRHHRYTLPGPHARPAALAGRD
PDPPLHLHVRYEGARSN*
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