NO01G05740, NO01G05740 (gene) Nannochloropsis oceanica

Overview
NameNO01G05740
Unique NameNO01G05740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1347
Alignment locationchr1:1606907..1608253 +

Link to JBrowse

Properties
Property NameValue
Descriptionco-factor for nitrate, reductase and xanthine dehydrogenase 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1606907..1608253 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008641ubiquitin-like modifier activating enzyme activity
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR035985Ubiquitin-activating_enz
IPR000594ThiF_NAD_FAD-bd
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_009120036.1 (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Brassica rapa])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            ++ + I RYSRQLLLPSFGV+GQ NLL SSVLV+GAGGLGS  LLYLA  GVGRLGI+D D VE +N+HRQVIHTEA  G  K  SAA + R++NS +++  Y E +   N   +L  ++++VDA+DNP +RY+++D C L                           LVSGAALG+EGQ+TV++++
Sbjct:   66 MSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNHK 229
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_013613058.1 (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Brassica oleracea var. oleracea])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            ++ + I RYSRQLLLPSFGV+GQ NLL SSVLV+GAGGLGS  LLYLA  GVGRLGI+D D VE +N+HRQVIHTEA  G  K  SAA + R++NS +++  Y E +   N   +L  ++++VDA+DNP +RY+++D C L                           LVSGAALG+EGQ+TV++++
Sbjct:   66 MSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNHK 229
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_013666953.1 (adenylyltransferase and sulfurtransferase MOCS3-like [Brassica napus])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            ++ + I RYSRQLLLPSFGV+GQ NLL SSVLV+GAGGLGS  LLYLA  GVGRLGI+D D VE +N+HRQVIHTEA  G  K  SAA + R++NS +++  Y E +   N   +L  ++++VDA+DNP +RY+++D C L                           LVSGAALG+EGQ+TV++++
Sbjct:   66 MSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNHK 229
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_018457194.1 (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Raphanus sativus])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            ++ + I RYSRQLLLPSFGV+GQ NLL SSVLV+GAGGLGS  LLYLA  GVGRLGI+D D VE +N+HRQVIHTEA  G  K  SAA + R++NS +++  Y E +   N   +L  ++++VDA+DNP +RY+++D C L                           LVSGAALG+EGQ+TV++++
Sbjct:   64 MSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNHK 227
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_020209176.1 (adenylyltransferase and sulfurtransferase MOCS3 [Cajanus cajan])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/186 (50.00%), Postives = 122/186 (65.59%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            LT + I RYSR L+LPSFGVQGQ NLL SS+LVVGAGGLG+  LLY+A +GVGRLGIVD D VE +N+HRQVIHTEA  G  K  SAA + R++NS ++V  ++E +   N   +L  +++++DA+DN  TRY+++D C                             LVSGAALGLEGQ+TV++Y
Sbjct:   61 LTQDMIHRYSRHLMLPSFGVQGQANLLKSSILVVGAGGLGAPALLYIAASGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVESAAAACRSINSTIQVVEHQEALRTSNALEILSKYDIIIDATDNAPTRYMISDCC-----------------------VVLGKPLVSGAALGLEGQLTVYNY 223
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_010675744.1 (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 171.4 bits (433), Expect = 4.600e-39
Identity = 95/187 (50.80%), Postives = 119/187 (63.64%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            L S+ I RYSR LLLPSFGVQGQ NLL SS+LVVGAGGLGS  LLYLA  GVGR+GIVD D VE +N+HRQVIHTE+  G  K  SAA + RA+NS +E+  Y E +   N   +   ++ ++DA+DN  +RY++ND C                             LVSGAALGLEGQ+TV++Y+
Sbjct:   66 LPSDAIYRYSRHLLLPSFGVQGQSNLLKSSMLVVGAGGLGSPALLYLAACGVGRIGIVDHDVVELNNMHRQVIHTESYIGKSKVESAAAACRAINSTIEIVEYREALRTSNALEIFSKYDYIIDATDNVPSRYMINDCC-----------------------VVLKKPLVSGAALGLEGQLTVYNYK 229
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_018824599.1 (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Juglans regia])

HSP 1 Score: 171.4 bits (433), Expect = 4.600e-39
Identity = 97/186 (52.15%), Postives = 119/186 (63.98%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            LT E I RYSR LLLPSFGVQ Q NLL SSVLVVGAGGLGS  LLYLA  GVGRLGIVD D VE +N+HRQ+IHTEA  G  K  SAA + R++NS V++  + E +   N  G+   ++V+VDA+DN  +RY+++D C                             LVSGAALGLEGQ+TV++Y
Sbjct:   67 LTPEMIHRYSRHLLLPSFGVQAQSNLLKSSVLVVGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQIIHTEAFIGQPKVKSAAAACRSVNSTVQIVEHHEALRTSNALGIFSKYDVIVDATDNAPSRYMISDCC-----------------------VVLGKPLVSGAALGLEGQLTVYNY 229
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_014502670.1 (adenylyltransferase and sulfurtransferase MOCS3 [Vigna radiata var. radiata])

HSP 1 Score: 171.0 bits (432), Expect = 6.100e-39
Identity = 95/187 (50.80%), Postives = 121/187 (64.71%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            LT + I RYSR L+LPSFGV+GQ NLL SS+LVVGAGGLG+  LLY A AGVGRLGIVD D VE +N+HRQVIHTEA  G  K  SAA +  ++NS +EV  +EE +   N   +L  ++++VDA+DN  TRYL++D C                             LVSGAALG+EGQ+TV++Y+
Sbjct:   57 LTQDMIHRYSRHLMLPSFGVEGQANLLKSSILVVGAGGLGAPALLYFAAAGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACLSVNSTIEVVEHEEALRTSNALEILSKYDIIVDATDNAPTRYLISDCC-----------------------VVLGKPLVSGAALGMEGQLTVYNYK 220
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_021758989.1 (adenylyltransferase and sulfurtransferase MOCS3-like [Chenopodium quinoa])

HSP 1 Score: 171.0 bits (432), Expect = 6.100e-39
Identity = 94/187 (50.27%), Postives = 119/187 (63.64%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            L S+ I RYSR LLLPSFGVQGQ NLL SSVLVVGAGGLGS  LLYLA  GVGR+GIVD D VE +N+HRQVIHTEA  G  K  SAA + R++NS +E+  Y E +   N   +   +++++DA+DN  +RY++ND C                             LVSGAALG EGQ+T+++Y+
Sbjct:   67 LPSDAIYRYSRHLLLPSFGVQGQSNLLKSSVLVVGAGGLGSPALLYLAACGVGRIGIVDHDVVELNNMHRQVIHTEAYIGKSKVESAAAACRSINSTIEIVEYREALRISNALEIFSKYDLIIDATDNVPSRYMINDCC-----------------------IVLKKPLVSGAALGFEGQLTIYNYK 230
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_021905835.1 (adenylyltransferase and sulfurtransferase MOCS3 [Carica papaya])

HSP 1 Score: 171.0 bits (432), Expect = 6.100e-39
Identity = 94/186 (50.54%), Postives = 122/186 (65.59%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            L+++ I RYSR LLLPSFGVQGQ NLL SS+LVVGAGGLGS  LLYLA  GVG+LGIVD D VE +N+HRQVIHTE   G  K  SAA + R++NS +++  Y+E +   N   +L  +++VVDA+DN  +RY+++D C L                           LVSGAALG+EGQ+TV++Y
Sbjct:   68 LSADQIYRYSRHLLLPSFGVQGQSNLLKSSILVVGAGGLGSPALLYLAACGVGKLGIVDHDVVELNNMHRQVIHTEEYIGHPKVKSAAAACRSINSTIQIVEYKEALRTSNALEILSKYDIVVDATDNAPSRYMISDCCVL-----------------------LRKPLVSGAALGMEGQLTVYNY 230
The following BLAST results are available for this feature:
BLAST of NO01G05740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009120036.13.600e-3949.73PREDICTED: adenylyltransferase and sulfurtransfera... [more]
XP_013613058.13.600e-3949.73PREDICTED: adenylyltransferase and sulfurtransfera... [more]
XP_013666953.13.600e-3949.73adenylyltransferase and sulfurtransferase MOCS3-li... [more]
XP_018457194.13.600e-3949.73PREDICTED: adenylyltransferase and sulfurtransfera... [more]
XP_020209176.13.600e-3950.00adenylyltransferase and sulfurtransferase MOCS3 [C... [more]
XP_010675744.14.600e-3950.80PREDICTED: adenylyltransferase and sulfurtransfera... [more]
XP_018824599.14.600e-3952.15PREDICTED: adenylyltransferase and sulfurtransfera... [more]
XP_014502670.16.100e-3950.80adenylyltransferase and sulfurtransferase MOCS3 [V... [more]
XP_021758989.16.100e-3950.27adenylyltransferase and sulfurtransferase MOCS3-li... [more]
XP_021905835.16.100e-3950.54adenylyltransferase and sulfurtransferase MOCS3 [C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006457NSK006457Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05740.1NO01G05740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551358gene_607Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101359g1gene7655Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05740.1NO01G05740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05740 ID=NO01G05740|Name=NO01G05740|organism=Nannochloropsis oceanica|type=gene|length=1347bp
ATGCCTGAGTTAGTCACTGTGAGAGgtagggtgtgaggtacgaaggcagg
cgaagagacaccacagatcacagacacgttcgtcatctccatcaagccgt
gggccaggaggtcgacatctccttgttgcactatatgacgcttcccacac
ccacaacccacagAGACCACTGGCTGTGGACAAAGAGGGAGAAATATGAC
AGCTACTGGAGGCCAAGCTGCCCGAACGGCAGAGCTCGAGgtgagtttaa
ggatgttggcctcgtaccctccctccctcccaaacggacttgcctcccct
ccctcactctgctccctctccgccttgacagCAGAATCCCCCCCCAGCAC
TGTCCTATGAAGCGCTCCTCGAGGAAAATTTACGTCTCAAGGAACAGCTC
CAGCAGCTGCAGCAACAACATCAACGACAACAATCGCAGCAGCAGCAGCA
GCAGCAGCGAAAAAAAACTCCATCTACTCCCCTTTCCTGTTCCTCCTCCG
TCCCTCTCCCCCCTCTCCCGCCTGTCCACCAGCTCACTTCTGAACACATC
ACCCGCTACTCTCGGCAGCTGCTCCTCCCATCCTTTGGCGTGCAAGGGCA
GCGAAACCTTTTGTCGTCCTCTGTGCTTGTCGTCGGTGCCGgtatgtgtc
tccctttcctcctccctcccctttcagctctgccctccctctcttcatgc
attctcttaccgcgatgatatcaactatctattcatactgtttctcttgc
cctccttcttccctctgtcgacaagGCGGGCTGGGCTCGGCCGTCCTCCT
TTACCTAGCTGGGGCCGGCGTAGGCCGTTTGGGAATTGTCGACTTCGATG
GGGTCGAACGCAGCAATCTCCACCGACAGGTCATCCACACCGAGGCAAGG
GAGGGCGGGAGGAAAGCCTGGTCTGCCGCAGAAAGTGTCCGGGCCCTGAA
TAGCCAGGTGGAGGTGTGTGTGTATGAGGAGGAGGTGGGATGGGACAACG
TGGAGGGGCTGCTGCAAGGGTGGGAGGTTGTGGTGGACGCTAGCGATAAT
CCCCGTACGAGATATTTACTCAATGATGCCTGTTGGCTGGGCCAGGGGGA
GGGTGAGGGAGGGAGGGAGGAAGGGAAGGAGGGAAGGAGGAGGAGGGGGA
GGAGGGGGAGGCCGTCGGCGCTGGTGTCCGGGGCAGCTCTGGGCTTGGAG
GGACAGGTGACAGTCTTTGACTACGAGCCGTTGGGGCAAGAAGCAGGACG
TGGGAAAGGTGGAAGAGGAGGAAGGGGGGGGGGGGAGGAGAAGGGGAAGG
AGGAGGAGGACGCAGGGGAGGAGGAGGACAGGGAGAACAGAAGTTGA
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protein sequence of NO01G05740.1

>NO01G05740.1-protein ID=NO01G05740.1-protein|Name=NO01G05740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MPELVTVRETTGCGQRGRNMTATGGQAARTAELEQNPPPALSYEALLEEN
LRLKEQLQQLQQQHQRQQSQQQQQQQRKKTPSTPLSCSSSVPLPPLPPVH
QLTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAG
AGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVE
VCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGG
REEGKEGRRRRGRRGRPSALVSGAALGLEGQVTVFDYEPLGQEAGRGKGG
RGGRGGGEEKGKEEEDAGEEEDRENRS*
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Synonyms
Publications