NO01G05740, NO01G05740 (gene) Nannochloropsis oceanica

Overview
NameNO01G05740
Unique NameNO01G05740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1347
Alignment locationchr1:1606907..1608253 +

Link to JBrowse

Properties
Property NameValue
Descriptionco-factor for nitrate, reductase and xanthine dehydrogenase 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1606907..1608253 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008641ubiquitin-like modifier activating enzyme activity
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR035985Ubiquitin-activating_enz
IPR000594ThiF_NAD_FAD-bd
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
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BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_007142325.1 (hypothetical protein PHAVU_008G270700g [Phaseolus vulgaris] >ESW14319.1 hypothetical protein PHAVU_008G270700g [Phaseolus vulgaris])

HSP 1 Score: 176.4 bits (446), Expect = 1.400e-40
Identity = 98/186 (52.69%), Postives = 121/186 (65.05%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            LT + I RYSR L+LPSFGVQGQ NLL SS+LVVGAGGLG+  LLY A +GVGRLGIVD D VE +N+HRQVIHTEA  G  K  SAA + R++NS +EV  YEE +   N   +L  ++++VDA+DN  TRYL++D C                             LVSGAALGLEGQ+TV++Y
Sbjct:   55 LTQDMIHRYSRHLMLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACRSINSTIEVVEYEEALRTSNALEILSKYDIIVDATDNAPTRYLISDCC-----------------------VVLGKPLVSGAALGLEGQLTVYNY 217
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BLAST of NO01G05740 vs. NCBI_GenBank
Match: CDP07189.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 176.0 bits (445), Expect = 1.900e-40
Identity = 99/186 (53.23%), Postives = 122/186 (65.59%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            L S+ I RYSRQLLLP+FGVQGQ NLL SSVLV+GAGGLGS  LLYLA  G GR+GIVD D VE +NLHRQ+IHTEA  G  K  SAA + RA+NS VE+  ++E     N  G+++ +++VVDA+DN  +RYL+ND C                             LVSGAALGLEGQ+TV++Y
Sbjct:   79 LASDMIYRYSRQLLLPAFGVQGQANLLKSSVLVIGAGGLGSPALLYLAACGFGRIGIVDHDVVELNNLHRQIIHTEAYIGRPKVESAAAACRAINSTVEIVEHKEAFRATNALGIVRKYDIVVDATDNVPSRYLINDCC-----------------------VVLGKPLVSGAALGLEGQLTVYNY 241
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BLAST of NO01G05740 vs. NCBI_GenBank
Match: CBJ30195.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 175.6 bits (444), Expect = 2.500e-40
Identity = 101/206 (49.03%), Postives = 126/206 (61.17%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE-----------PLGQEAGR 297
            +T+  I RYSR LL+P+ GV+GQRNLL  + LV+GAGGL SAVL YLAGAGVG + I+DFD +E SNLHRQV++ E + G  KA  AA +VR +NS +     EE +  DN    L G ++VVDASDNPRTRYL+NDAC L                         + LVSG+ALG+EGQV+VF +            PL  EAGR
Sbjct:    1 MTAAEIARYSRHLLVPAIGVEGQRNLLDKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLYREGQAGQSKAKCAAATVRDINSSIRCTAIEEALTHDNAMDTLAGVDLVVDASDNPRTRYLVNDACVLS-----------------------GTPLVSGSALGMEGQVSVFHHRGGPCYRCVFPAPLAAEAGR 183
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BLAST of NO01G05740 vs. NCBI_GenBank
Match: KHN38254.1 (Adenylyltransferase and sulfurtransferase MOCS3 [Glycine soja] >KRH73791.1 hypothetical protein GLYMA_02G293600 [Glycine max])

HSP 1 Score: 172.9 bits (437), Expect = 1.600e-39
Identity = 95/186 (51.08%), Postives = 121/186 (65.05%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            LT + I RYSR L+LPSFGVQGQ NLL SS+LVVGAGGLG+  LLY A +GVGRLG++D D VE +N+HRQVIHTEA  G  K  SAA + R++NS ++V  +EE +   N   LL  ++++VDA+DN  TRYL++D C                             LVSGAALGLEGQ+TV++Y
Sbjct:   46 LTQDMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGRLGVIDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACRSINSTIQVVEHEEALRTSNALELLSKYDIIVDATDNAPTRYLISDCC-----------------------VVLGKPLVSGAALGLEGQLTVYNY 208
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BLAST of NO01G05740 vs. NCBI_GenBank
Match: KZS03699.1 (Adenylyltransferase and sulfurtransferase MOCS3 [Daphnia magna])

HSP 1 Score: 172.9 bits (437), Expect = 1.600e-39
Identity = 91/186 (48.92%), Postives = 125/186 (67.20%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDY 288
            LT + ++RYSRQL+LP  GV+GQ+ L +SSVL++GAGGLG    +YLA AG+G LG+VD+D VE SNLHRQ++H EA  G  KA S A++VR+LNS+V V V++ ++   N  G++ G++V +D SDNP TRYL+NDAC L       GR                  L+SG+AL  EGQ+TV++Y
Sbjct:   51 LTKDEVSRYSRQLILPQVGVEGQKQLANSSVLILGAGGLGCPAAIYLAAAGIGHLGVVDYDVVELSNLHRQIMHREASVGVSKAASLAQAVRSLNSRVRVTVHDVQLDGSNAMGIVSGYDVALDCSDNPATRYLINDACVL------SGR-----------------PLISGSALRWEGQLTVYNY 213
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_017428132.1 (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Vigna angularis] >KOM46546.1 hypothetical protein LR48_Vigan07g025000 [Vigna angularis] >BAT80682.1 hypothetical protein VIGAN_03027900 [Vigna angularis var. angularis])

HSP 1 Score: 172.6 bits (436), Expect = 2.100e-39
Identity = 96/187 (51.34%), Postives = 122/187 (65.24%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            LT + I RYSR L+LPSFGV+GQ NLL SS+LVVGAGGLG+  LLY A AGVGRLGIVD D VE +N+HRQVIHTEA  G  K  SAA +  ++NS +EV  +EE +   N   +L  ++++VDA+DN  TRYL++D C L                           LVSGAALG+EGQ+TV++Y+
Sbjct:   57 LTQDMIHRYSRHLMLPSFGVEGQANLLKSSILVVGAGGLGAPALLYFAAAGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACLSVNSTIEVVEHEEALRTSNALEILSKYDIIVDATDNAPTRYLISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNYK 220
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: KNA10176.1 (hypothetical protein SOVF_146840 [Spinacia oleracea])

HSP 1 Score: 172.2 bits (435), Expect = 2.700e-39
Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            L S+ I RYSR LLLPSFGVQGQ NLL SSVLVVGAGGLGS  LLYLA  GVGR+GIVD D VE +N+HRQVIHTEA  G  K  SAA + R++NS +E+  Y E +   N   +   +++++DA+DN  +RY++ND C                             LVSGAA+GLEGQ+T+++Y+
Sbjct:   65 LPSDAIYRYSRHLLLPSFGVQGQSNLLKSSVLVVGAGGLGSPALLYLAACGVGRIGIVDHDVVELNNMHRQVIHTEAYIGKSKVESAAAACRSINSTIEIVEYREALRTSNALEIFSKFDLIIDATDNAPSRYMINDCC-----------------------VVLKKPLVSGAAVGLEGQLTIYNYQ 228
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_021849058.1 (adenylyltransferase and sulfurtransferase MOCS3 [Spinacia oleracea])

HSP 1 Score: 172.2 bits (435), Expect = 2.700e-39
Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            L S+ I RYSR LLLPSFGVQGQ NLL SSVLVVGAGGLGS  LLYLA  GVGR+GIVD D VE +N+HRQVIHTEA  G  K  SAA + R++NS +E+  Y E +   N   +   +++++DA+DN  +RY++ND C                             LVSGAA+GLEGQ+T+++Y+
Sbjct:   65 LPSDAIYRYSRHLLLPSFGVQGQSNLLKSSVLVVGAGGLGSPALLYLAACGVGRIGIVDHDVVELNNMHRQVIHTEAYIGKSKVESAAAACRSINSTIEIVEYREALRTSNALEIFSKFDLIIDATDNAPSRYMINDCC-----------------------VVLKKPLVSGAAVGLEGQLTIYNYQ 228
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_013666954.1 (adenylyltransferase and sulfurtransferase MOCS3 [Brassica napus] >XP_022565940.1 adenylyltransferase and sulfurtransferase MOCS3 [Brassica napus] >CDY19912.1 BnaC09g31780D [Brassica napus])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            ++ + I RYSRQLLLPSFGV+GQ NLL SSVLV+GAGGLGS  LLYLA  GVGRLGI+D D VE +N+HRQVIHTEA  G  K  SAA + R++NS +++  Y E +   N   +L  ++++VDA+DNP +RY+++D C L                           LVSGAALG+EGQ+TV++++
Sbjct:   66 MSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNHK 229
[Close]
BLAST of NO01G05740 vs. NCBI_GenBank
Match: XP_013666829.1 (adenylyltransferase and sulfurtransferase MOCS3 [Brassica napus] >CDY17304.1 BnaA10g09380D [Brassica napus])

HSP 1 Score: 171.8 bits (434), Expect = 3.600e-39
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 0 
Query:  102 LTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAGAGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVEVCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGGREEGXXXXXXXXXXXXPSALVSGAALGLEGQVTVFDYE 289
            ++ + I RYSRQLLLPSFGV+GQ NLL SSVLV+GAGGLGS  LLYLA  GVGRLGI+D D VE +N+HRQVIHTEA  G  K  SAA + R++NS +++  Y E +   N   +L  ++++VDA+DNP +RY+++D C L                           LVSGAALG+EGQ+TV++++
Sbjct:   66 MSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVL-----------------------LGKPLVSGAALGMEGQLTVYNHK 229
The following BLAST results are available for this feature:
BLAST of NO01G05740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_007142325.11.400e-4052.69hypothetical protein PHAVU_008G270700g [Phaseolus ... [more]
CDP07189.11.900e-4053.23unnamed protein product [Coffea canephora][more]
CBJ30195.12.500e-4049.03conserved unknown protein [Ectocarpus siliculosus][more]
KHN38254.11.600e-3951.08Adenylyltransferase and sulfurtransferase MOCS3 [G... [more]
KZS03699.11.600e-3948.92Adenylyltransferase and sulfurtransferase MOCS3 [D... [more]
XP_017428132.12.100e-3951.34PREDICTED: adenylyltransferase and sulfurtransfera... [more]
KNA10176.12.700e-3950.27hypothetical protein SOVF_146840 [Spinacia olerace... [more]
XP_021849058.12.700e-3950.27adenylyltransferase and sulfurtransferase MOCS3 [S... [more]
XP_013666954.13.600e-3949.73adenylyltransferase and sulfurtransferase MOCS3 [B... [more]
XP_013666829.13.600e-3949.73adenylyltransferase and sulfurtransferase MOCS3 [B... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006457NSK006457Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05740.1NO01G05740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551358gene_607Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101359g1gene7655Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05740.1NO01G05740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05740 ID=NO01G05740|Name=NO01G05740|organism=Nannochloropsis oceanica|type=gene|length=1347bp
ATGCCTGAGTTAGTCACTGTGAGAGgtagggtgtgaggtacgaaggcagg
cgaagagacaccacagatcacagacacgttcgtcatctccatcaagccgt
gggccaggaggtcgacatctccttgttgcactatatgacgcttcccacac
ccacaacccacagAGACCACTGGCTGTGGACAAAGAGGGAGAAATATGAC
AGCTACTGGAGGCCAAGCTGCCCGAACGGCAGAGCTCGAGgtgagtttaa
ggatgttggcctcgtaccctccctccctcccaaacggacttgcctcccct
ccctcactctgctccctctccgccttgacagCAGAATCCCCCCCCAGCAC
TGTCCTATGAAGCGCTCCTCGAGGAAAATTTACGTCTCAAGGAACAGCTC
CAGCAGCTGCAGCAACAACATCAACGACAACAATCGCAGCAGCAGCAGCA
GCAGCAGCGAAAAAAAACTCCATCTACTCCCCTTTCCTGTTCCTCCTCCG
TCCCTCTCCCCCCTCTCCCGCCTGTCCACCAGCTCACTTCTGAACACATC
ACCCGCTACTCTCGGCAGCTGCTCCTCCCATCCTTTGGCGTGCAAGGGCA
GCGAAACCTTTTGTCGTCCTCTGTGCTTGTCGTCGGTGCCGgtatgtgtc
tccctttcctcctccctcccctttcagctctgccctccctctcttcatgc
attctcttaccgcgatgatatcaactatctattcatactgtttctcttgc
cctccttcttccctctgtcgacaagGCGGGCTGGGCTCGGCCGTCCTCCT
TTACCTAGCTGGGGCCGGCGTAGGCCGTTTGGGAATTGTCGACTTCGATG
GGGTCGAACGCAGCAATCTCCACCGACAGGTCATCCACACCGAGGCAAGG
GAGGGCGGGAGGAAAGCCTGGTCTGCCGCAGAAAGTGTCCGGGCCCTGAA
TAGCCAGGTGGAGGTGTGTGTGTATGAGGAGGAGGTGGGATGGGACAACG
TGGAGGGGCTGCTGCAAGGGTGGGAGGTTGTGGTGGACGCTAGCGATAAT
CCCCGTACGAGATATTTACTCAATGATGCCTGTTGGCTGGGCCAGGGGGA
GGGTGAGGGAGGGAGGGAGGAAGGGAAGGAGGGAAGGAGGAGGAGGGGGA
GGAGGGGGAGGCCGTCGGCGCTGGTGTCCGGGGCAGCTCTGGGCTTGGAG
GGACAGGTGACAGTCTTTGACTACGAGCCGTTGGGGCAAGAAGCAGGACG
TGGGAAAGGTGGAAGAGGAGGAAGGGGGGGGGGGGAGGAGAAGGGGAAGG
AGGAGGAGGACGCAGGGGAGGAGGAGGACAGGGAGAACAGAAGTTGA
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protein sequence of NO01G05740.1

>NO01G05740.1-protein ID=NO01G05740.1-protein|Name=NO01G05740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MPELVTVRETTGCGQRGRNMTATGGQAARTAELEQNPPPALSYEALLEEN
LRLKEQLQQLQQQHQRQQSQQQQQQQRKKTPSTPLSCSSSVPLPPLPPVH
QLTSEHITRYSRQLLLPSFGVQGQRNLLSSSVLVVGAGGLGSAVLLYLAG
AGVGRLGIVDFDGVERSNLHRQVIHTEAREGGRKAWSAAESVRALNSQVE
VCVYEEEVGWDNVEGLLQGWEVVVDASDNPRTRYLLNDACWLGQGEGEGG
REEGKEGRRRRGRRGRPSALVSGAALGLEGQVTVFDYEPLGQEAGRGKGG
RGGRGGGEEKGKEEEDAGEEEDRENRS*
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Synonyms
Publications