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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:1601013..1604220 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO01G05720 vs. NCBI_GenBank
Match: EWM22790.1 (hypothetical protein Naga_100349g5 [Nannochloropsis gaditana]) HSP 1 Score: 77.8 bits (190), Expect = 1.500e-10 Identity = 128/369 (34.69%), Postives = 159/369 (43.09%), Query Frame = 0
Query: 50 PPAPLVFMLRLAALLLCVDTLLIISSSSPGTVFLLRGLNCVIGAVLCFRAATRLETSHQALESQQXXXXXXXLAAMLAAPKSLSFSISPTRSRTRPFLFAMMEGQDRA-GSPPGAGRHHGNSSPSPPRCHGPSASLGNAGDLEGKKGTEGKEDRREEVEEEALDSDMDCGGSG--AWGQFNSGEEGGREQQAGSFGDAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLTLLLCLSAVLLLVDAGWIFWVASTNTTTTYPRTDPSFPPAGGPTPAPPSGSSSLRQHPRQSSSPNGRNSSNVVYGALLYVIGLLCVFASCASASAARRLWTYGSLL-MEGERMRESDDEEGEEVLERARER 415
PPAPL+F+LRL+ LLLC+ LLIISSS+PG L++GL C+ GA+L +AA LE H LE Q A+ + PK +SF SP RS TR + + QD A G HH N+S H AG G+ E D G WG + E + + G XXXXXXXXXXXXXXXXX +LT L LSAVLL VDA W+F +A T S PP+ G ++ LL VIG+LC+ AS A+ A R+ YG L EGE EG+E AR R
Sbjct: 70 PPAPLIFVLRLSTLLLCMAALLIISSSTPGITVLIQGLICIFGAILSCQAAAYLERIHSGLEQQHDEEIS---VALRSGPKRISFVTSPPRSTTRLPVTRITFPQDLAHAEENGEENHHQNTS-----LH------HMAGRGRGRXXXXXXXXXXXXXEVVVPQGDHGVAGQHGCGWGHYQDYAEDREKGRGGGAAWDQGGEDPVLPLPAPXXXXXXXXXXXXXXXXXHNRLSRDKRLTFLHSLSAVLLFVDALWVFSLAGTAF---------SRPPSFXXXXXXXXXXXXXXXXXXXXXGEEG-----ILRVVLLCVIGILCLVASGAAVGATLRVRFYGGLRGCEGEVA-----VEGKEAGNAARHR 405
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05720 ID=NO01G05720|Name=NO01G05720|organism=Nannochloropsis oceanica|type=gene|length=3208bp
CTTGAATGGGCGTCGCGGTGGGCGTAGCATGACCTGACTTTTTTCTTTTG
ACTGCATATCCTGAGAGGGCTCTCTATGGCACGTGCCGAAGTAGGCCGAC
ACTTTACTGTGCTGAGCATCACACCCCCACAGACAGGGCGCTCATATCTT
GTGCCCTGGGCCATTTCGTGGCGTATGTGGCTCTTGCACATTTATGTCTG
TCCTCGATGTAGATGGACATGACTTACAATTGCATTGCGAAGATGGATGG
AAGAAGAAAGAAGATCGCGCGCCGCCCTCGTCTCAACCTCCCCCTCATGC
CTTTGGGCTGTTCGTGCATTTCCCTCCCCTCTCTTTCTCTCCGTGACCCG
CTCTGAACCAAGACTCTCTACTCATAGATCTGGAATCTTACGAAGGGTTT
GATAGTGGTGCAGCTCAACATGAGAACGAGGTCTCTCCCAATCAGGAACC
ATTTCGTGCCTTTCCCCCTTCGGCACGAAGTTCCGTTGCGCGGAGCGAGA
GCGACAGCAGGCAGCATGCCTGCCATGTCAAGCTGCACTTTGACACCCCC
CAACTACTCACCACGGGACACATTACGCACACTAGGAAGATTCCAGTGTG
AAGAAACGACCATGAATCCTCCCTCATTATACTTACCATGATGCAAATTT
AGAGGAGATGCCTGGGACCTATTTGCTCCATAGTGTTCACTAATTTATCG
TGGACTTCAGAAGCCGCGGCTCACCGAAACGATGAGCCGCCATGACTGTC
CACGAGGTGGTGTCACCCATGTGCGGTACTAGTTACCACACGAGCCTCAC
AATGAACGAACGACACAATCACAGACACAGATACAAACAAAGGCACAGAC
ACAGACACAGATATATACACAGATAGAGATACACACAGATGCAGACAATG
GCATGGGCACACACAAGCATAAACCTACACACTAACACTCAAACACAAAC
ACACACACACTCACTGCACGCGGGCTTTCGTTCACCATCTCAATTCTACA
GTGCAATTGAGGGCAAATTGGTAAGCCGCTGCCACCTGCCAGTATTCAAC
AAGAAAGGAGACCCGAAGCCGCTGTTTTCGCAGGCCATACCGCCTTTGTG
TCGGCCTTACAGATCGCGTTGCGATGGACAAGCATCCCCCGGAAAGGCCT
GCTCCGCCGGAGGTCGCGGCATGCCAGCTTGCTTCGGCGGAACACACCAT
CGGCAATGCGCCCTCCTCTCCTCCTGCCATACATCACGACTACGTTCCCG
GCTCGAAGGACCTGCGTGGCCCCCCTGCGCCGTTAGTGTTTATGCTGCGC
CTCGCTGCACTGCTTTTGTGCGTGGACACCCTGCTCATCATTTCCTCTTC
CTCTCCGGGCACTGTGTTTCTCCTTCGTGGCCTGAACTGCGTCATTGGCG
CCGTCCTCTGCTTCCGTGCCGCCACGCGGCTCGAGACCTCCCACCAGGCC
CTGGAATCACAGCAGCAAGAAGAAGAGGCCAAGGCCCTGGCTGCCATGCT
TGCGGCACCGAAGTCTTTATCATTCAGCATCTCGCCCACTCGGTCTCGCA
CACGTCCTTTTCTGTTTGCGATGATGGAGGGGCAAGACCGTGCGGGATCC
CCCCCCGGGGCAGGCCGACACCACGGTAACAGTAGCCCCTCTCCTCCTCG
ATGCCACGGTCCGTCTGCCAGCCTGGGGAATGCAGGAGATCTCGAGGGAA
AGAAGGGGACAGAAGGGAAAGAGGATAGGCGGGAGGAGGTGGAGGAGGAA
GCCTTGGACTCTGACATGGACTGTGGCGGGAGCGGCGCGTGGGGCCAATT
CAACAGCGGCGAAGAAGGCGGGAGAGAACAGCAGGCTGGCAGTTTTGGCG
ATGCCGTCGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTACTGCTGGAACT
GATGCTGGTGCTGGTGCTGGTGCTGATGCGGGTACTGAAACTCCTGCTAC
CAGTGTGAATTGCAACAAGAAGCTGACGCTCCTCCTCTGCCTCTCCGCCG
TCCTCCTTCTCGTGGACGCGGGGTGGATCTTCTGGGTGGCGTCCACTAAC
ACAACCACCACCTACCCACGCACCGATCCTTCCTTTCCTCCCGCCGGTGG
CCCTACTCCGGCCCCTCCCTCGGGTTCTAGCTCCCTTCGACAACACCCAC
GGCAAAGCAGCAGCCCTAACGGTCGGAACAGCAGCAACGTGGTGTACGGG
GCCCTATTGTATGTAATTGGCCTGCTTTGCGTGTTTGCCAGCTGTGCGTC
TGCAAGCGCGGCAAGGCGATTGTGGACGTACGGGTCGCTGCTGATGGAAG
GGGAGAGAATGAGGGAATCAGACGACGAAGAGGGGGAGGAAGTGTTGGAG
AGAGCAAGGGAGCGAGAGGCAGCCTTGATGCCGCGGTCTGCGTCAAAATG
CGTCTCATTCGAGGGGATAGGGATCCTGGGACAGGGCGAGCAGAAGGAGA
TGGAACAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAA
ATAGTAGGCGCGATGGTGAATGCGGCTGAGGAAGGGGAGGAGGAGGGGAA
GGAGGGGAAGGAAGAGAAGGTGCAGTGCATGGCAATTGAAATTCTGGACT
GTGGAGAGGAGGAGGAGAAGGAGGAGGAGGATGAAGAAGGTGGGGAGGGA
GGGTTAGATGACGACTCTCCCCTCTTTCCCTCCACTCCCTCTTCCTCTGT
CACCCCTAAAAATATAGCCTGCCCTCGTTCTCCCCTCGATTGTTTCTCAG
CAATAGTAGCAGAAGGCGGAGGAAGGGCAAGGTTAGCAGCAGCGGAGCCA
CATGAGAAGCTATTGATTAAAGGAGAAGTGGATGGGCTGCTGCGTCGTTG
TGCTTCCGTCGAGGACCAGAGGCGACTTGCCCTCCTCTTGACCACCACCG
CCGCCGGCGTCGCTGGAGGCATAAGCAGCAGCATCAATAACAGCAGCTGC
TGCAGCAGCAATAAAATTCGTCGTTGCGCCTCTTTTGTGGACTTCAGCAG
CACCGGCAACAGCAGCCACCAGAGGGCGATGGGAAGGCTGGCGAATCCCC
TTGCTGCACAACAGCCAACCGTCATCCGCTCCGCCTCTTCTCCTTCCTGC
GCCCACGATGATAGCAGCAGCAACAGCAGCAACAAAAGCAACAATATCTC
GAAAATGCTGACGCCAGCAGTCGGTCATGTGCCCCGGCTGACGCCGGTAC
GTGTGTGA back to topprotein sequence of NO01G05720.1 >NO01G05720.1-protein ID=NO01G05720.1-protein|Name=NO01G05720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=695bp
MDKHPPERPAPPEVAACQLASAEHTIGNAPSSPPAIHHDYVPGSKDLRGP
PAPLVFMLRLAALLLCVDTLLIISSSSPGTVFLLRGLNCVIGAVLCFRAA
TRLETSHQALESQQQEEEAKALAAMLAAPKSLSFSISPTRSRTRPFLFAM
MEGQDRAGSPPGAGRHHGNSSPSPPRCHGPSASLGNAGDLEGKKGTEGKE
DRREEVEEEALDSDMDCGGSGAWGQFNSGEEGGREQQAGSFGDAVAAAAA
AAAAPTAGTDAGAGAGADAGTETPATSVNCNKKLTLLLCLSAVLLLVDAG
WIFWVASTNTTTTYPRTDPSFPPAGGPTPAPPSGSSSLRQHPRQSSSPNG
RNSSNVVYGALLYVIGLLCVFASCASASAARRLWTYGSLLMEGERMRESD
DEEGEEVLERAREREAALMPRSASKCVSFEGIGILGQGEQKEMEQKEEEE
EEEEEEEEEIVGAMVNAAEEGEEEGKEGKEEKVQCMAIEILDCGEEEEKE
EEDEEGGEGGLDDDSPLFPSTPSSSVTPKNIACPRSPLDCFSAIVAEGGG
RARLAAAEPHEKLLIKGEVDGLLRRCASVEDQRRLALLLTTTAAGVAGGI
SSSINNSSCCSSNKIRRCASFVDFSSTGNSSHQRAMGRLANPLAAQQPTV
IRSASSPSCAHDDSSSNSSNKSNNISKMLTPAVGHVPRLTPVRV* back to top
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