NO01G05660, NO01G05660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_091347779.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerobranca gottschalkii] >SES62832.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Anaerobranca gottschalkii DSM 13577]) HSP 1 Score: 164.1 bits (414), Expect = 9.100e-37 Identity = 99/244 (40.57%), Postives = 146/244 (59.84%), Query Frame = 0 Query: 8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQ 252 +PG S ++V I+RL N+HGI+V+ PLP+H+ ++ + I P KDVDG HS N G L+ +G F +P T LG + L+ C I + G V+V+GRS +VG P+A L L R ATVTIAHS+ T+DL A+ ++ADV++ AVGRP++I D +K+ A+V++VG V E +VGDVD + +V +TP P GVGP+T+ ML+++T+ SA R+ Sbjct: 69 LPGNTSEKEVLELIERLNNDDNIHGILVQLPLPKHIDEWK--VLDRINPQKDVDGFHSINVGNLS--------IGRDAF------VPCTPLGVIVMLEHCNIDL-TGKHVVVVGRSNIVGKPMAQLALQRHATVTIAHSR--TKDLGAITRQADVLIVAVGRPKMITKDMVKEGAIVIDVGINRV--ESGLVGDVDFDSVKEVAAQITPV-----------PGGVGPMTIAMLMHNTVLSAERR 280
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_054258185.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Propionispora sp. 2/2-37] >CUH93970.1 Bifunctional protein FolD [Propionispora sp. 2/2-37]) HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36 Identity = 96/246 (39.02%), Postives = 143/246 (58.13%), Query Frame = 0 Query: 6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQ 252 I +P E++ I RL + NVHGI+V+ PLP+H+K + +I +I P KDVDG H NAG+LA GL +P T G ++ L++ I ++ G R +VIGRS +VG P+ LLL R ATVT+ HS+ T++L + +EAD++V A+G+P+ + P+ +K AV+L+VG V E K +VGDVD + V +TP P GVG LT+ ML+++T+ +A Q Sbjct: 68 IRLPEAVGKEELLAVIARLNQDVNVHGILVQLPLPQHIKQYETEIVNSIDPLKDVDGFHPVNAGKLAIGEEGL--------------VPCTPNGCIRLLELADIPVE-GKRAVVIGRSNIVGKPMFHLLLARHATVTVCHSR--TQNLAEVTREADILVAAIGKPKFVTPEMVKPGAVILDVGINRVGERK-IVGDVDFEAVQDVAGAITPV-----------PGGVGVLTIAMLMHNTVRAAQLQ 284
BLAST of NO01G05660 vs. NCBI_GenBank
Match: OGW62222.1 (bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase [Nitrospirae bacterium RIFCSPHIGHO2_01_FULL_66_17]) HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36 Identity = 103/242 (42.56%), Postives = 139/242 (57.44%), Query Frame = 0 Query: 8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLD-IWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249 +P T S DV IDRL R +HGI+V+ PLP KP R + I + P KDVDG+H N G+L +GE RF +P T G M LD K+ I+ G +V+GRS LVG P+A+LLL R ATVTI HSKTP DL +C+ AD++V AVG+ R I + +K+ AVV++VG P+ K +VGDVD + +TP P GVGP+T+ ML+ +T+ +A Sbjct: 69 LPATTSQVDVLALIDRLNRDPAIHGILVQLPLP---KPLRSEPILYAVSPDKDVDGLHPVNVGKL--------MMGEPRF------VPCTPAGIMAMLDYYKLPIE-GKTAVVVGRSNLVGKPVAMLLLHRHATVTICHSKTP--DLAEVCRRADILVAAVGKARFIRGEMVKEGAVVIDVGINRQPDGK-LVGDVDFEAVAAKASWITPV-----------PGGVGPMTIAMLMQNTMLAA 278
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_091752288.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Propionispora vibrioides] >SEP47243.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Propionispora vibrioides]) HSP 1 Score: 162.9 bits (411), Expect = 2.000e-36 Identity = 97/243 (39.92%), Postives = 142/243 (58.44%), Query Frame = 0 Query: 6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249 I +P S E++ I L + VHGI+V+ PLPEH+KP+ +I I+P KDVDG H N G+LA L +P T G ++ L++ + IK G R +V+GRS +VG P+ LLL R ATVT+ HS+ T+DL A+ +EAD++V A+G+P+ + D +K AVV++VG V ++K +VGDVD + +V +TP P GVG LT+ MLLY+T+ +A Sbjct: 68 IRLPEQVSKEELLTVIAGLNQDPAVHGILVQLPLPEHIKPYESEILEAIQPVKDVDGFHPVNVGKLATGQEEL--------------VPCTPHGCIRLLELADLPIK-GKRAVVLGRSNIVGKPMFHLLLARHATVTVCHSR--TQDLAAITREADILVAAIGKPKFVTGDMVKPGAVVIDVGINRVGDKK-IVGDVDFDAVKEVASAITPV-----------PGGVGVLTIAMLLYNTVKAA 281
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_072905786.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerobranca californiensis] >SHJ66852.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Anaerobranca californiensis DSM 14826]) HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36 Identity = 97/244 (39.75%), Postives = 145/244 (59.43%), Query Frame = 0 Query: 8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQ 252 + G S ++V +++L N+HGI+V+ PLP+H+ ++ + I P KDVDG HS N G L +G F +P T LG + L+ C + + G V+V+GRS +VG P+A L L R ATVTIAHS+ T+DL A+ ++ADV++ AVGRP++I D +K+ AVV++VG V E +VGDVD G+ +V +TP P GVGP+T+ ML+++T+ SA R+ Sbjct: 69 LDGNTSEKEVLDLLEKLNNDSNIHGILVQLPLPKHIDEWK--VLDAIDPQKDVDGFHSINVGNLC--------IGRDAF------VPCTPLGVIVMLEHCNVDL-TGKHVVVVGRSNIVGKPMAQLALQRHATVTIAHSR--TKDLAAITRQADVLIVAVGRPKMITKDMVKEGAVVIDVGINRV--ESGLVGDVDFDGVKEVASQITPV-----------PGGVGPMTIAMLMHNTVLSAERR 280
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_080325358.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerovibrio lipolyticus] >SHI46816.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Anaerovibrio lipolyticus DSM 3074]) HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36 Identity = 94/243 (38.68%), Postives = 142/243 (58.44%), Query Frame = 0 Query: 6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249 + MP T + E++ EI+RL +HGI+V+ PLP+ L+P+ ++ I P KDVDG H N GRL L +P T G ++ L++ +I ++ GA+ +VIGRS +VG P+ LLLG++ATVT+ HS+ T +LK + KEAD+VV AVG+PR + D IK A V++VG + +K +VGDVD + ++ +TP P GVG LT+ ML+ +T+ +A Sbjct: 68 VEMPETTTHEELLAEINRLNNDPKIHGILVQLPLPKALQPYESEVLEAINPLKDVDGFHPVNVGRLVTGQKAL--------------VPCTPHGCIRMLELAEIPME-GAKAVVIGRSNIVGKPMLHLLLGKNATVTVCHSR--TRNLKDVVKEADIVVAAVGKPRFVTADMIKPGATVIDVGINRIVPKK-LVGDVDFDAVKELAGAITPV-----------PGGVGLLTIAMLMQNTVDAA 281
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_027396244.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerovibrio lipolyticus]) HSP 1 Score: 162.2 bits (409), Expect = 3.500e-36 Identity = 95/243 (39.09%), Postives = 142/243 (58.44%), Query Frame = 0 Query: 6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249 + MP T + E++ EI+RL +HGI+V+ PLP+ L+P+ ++ I P KDVDG H N GRL L +P T G ++ L++ +I ++ GA+ +VIGRS +VG P+ LLLG++ATVTI HS+ T++L + KEAD+VV AVG+PR + D IK A V++VG + +K +VGDVD + +V +TP P GVG LT+ ML+ +T+ +A Sbjct: 68 VEMPETTTREELLAEINRLNNDPKIHGILVQLPLPKALQPYESEVLEAINPLKDVDGFHPVNVGRLVTGQKAL--------------VPCTPHGCIRMLELAEIPME-GAKAVVIGRSNIVGKPMLHLLLGKNATVTICHSR--TKNLAEVVKEADIVVAAVGKPRFVTADMIKPGATVIDVGINRIAPKK-LVGDVDFDAVKEVAGAITPV-----------PGGVGLLTIAMLMQNTVDAA 281
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_039212217.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerovibrio lipolyticus] >KHM46323.1 5,10-methylene-tetrahydrofolate cyclohydrolase [Anaerovibrio lipolyticus]) HSP 1 Score: 161.0 bits (406), Expect = 7.700e-36 Identity = 94/243 (38.68%), Postives = 142/243 (58.44%), Query Frame = 0 Query: 6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249 + MP T + E++ EI+RL +HGI+V+ PLP+ L+P+ ++ I P KDVDG H N GRL L +P T G ++ L++ +I ++ GA+ +VIGRS +VG P+ LLLG++ATVTI HS+ T++L + KEAD+VV AVG+P+ + D IK A V++VG + +K +VGDVD + +V +TP P GVG LT+ ML+ +T+ +A Sbjct: 68 VEMPETTTREELLSEINRLNNDPKIHGILVQLPLPKALQPYESEVLEAINPLKDVDGFHPVNVGRLVTGQKAL--------------VPCTPHGCIRMLELAEIPME-GAKAVVIGRSNIVGKPMLHLLLGKNATVTICHSR--TKNLAEVVKEADIVVAAVGKPKFVTADMIKPGATVIDVGINRIAPKK-LVGDVDFDAVKEVAGAITPV-----------PGGVGLLTIAMLMQNTVDAA 281
BLAST of NO01G05660 vs. NCBI_GenBank
Match: KDQ60820.1 (hypothetical protein JAAARDRAFT_124343 [Jaapia argillacea MUCL 33604]) HSP 1 Score: 160.2 bits (404), Expect = 1.300e-35 Identity = 98/278 (35.25%), Postives = 150/278 (53.96%), Query Frame = 0 Query: 1 MDVTHIVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHL-KPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEE-----KAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQGRAAKHREKNKASIGVQPTTP 273 M HI +P AS E+V E+ +L +V GI+V+ PL +H+ + ++P KDVDG H+ N G L+ R E F P T G ++ L+ + I GA +V+GRS +VG P+A +L RDATVT HS+ T++L+A+ K AD++V A+G+ + ++ WIK AVV++VGT ++P+ + +VGDVD V +TP P GVGP+T+ ML+Y+TL +A RQ A+ + + +Q P Sbjct: 69 MKFKHITLPAEASVEEVVAEVSKLNEDESVSGILVQLPLGDHVGAAGERTVTEVVQPQKDVDGFHAYNIGHLS------SRACEPLF------TPCTPTGVIRLLESTGVTI-AGANAVVLGRSDIVGSPVAAMLRNRDATVTQCHSR--TKNLEAVIKNADILVSAIGKAQFVQGSWIKPGAVVIDVGTNYIPDATKKTGQRLVGDVDYASASAVASHITPV-----------PGGVGPMTVAMLMYNTLRAAERQWEEARSIKIKPLKLNIQEKVP 320
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_018703379.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaeromusa acidaminophila]) HSP 1 Score: 159.8 bits (403), Expect = 1.700e-35 Identity = 98/241 (40.66%), Postives = 140/241 (58.09%), Query Frame = 0 Query: 8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249 +PGTAS E++ I+ L + VHGI+V+ PLP+ L+ ++ I P KDVDG H NAGRLA +G+ +P T G ++ L+M + I+ G +VIGRS +VG P+A LLL R+ATVTI HS+ T+DL AM ++AD++V AVG+ + D +K AVV++VG +P K + GDVD + QV +TP P GVG LT+ MLL +T+ +A Sbjct: 70 LPGTASKEELLAVIELLNQDKTVHGILVQLPLPKALRAVEQEVLLAIDPAKDVDGFHPLNAGRLA--------VGDEHL------VPCTPAGCVKMLEMAGVEIQ-GKHAVVIGRSNIVGKPMAQLLLARNATVTICHSR--TKDLAAMARQADILVAAVGKTHFVTADMVKSGAVVIDVGINRLPNGK-LAGDVDFEKVQQVAGAITPV-----------PGGVGLLTIAMLLANTVKAA 281 The following BLAST results are available for this feature:
BLAST of NO01G05660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05660 ID=NO01G05660|Name=NO01G05660|organism=Nannochloropsis oceanica|type=gene|length=3485bpback to top protein sequence of NO01G05660.1 >NO01G05660.1-protein ID=NO01G05660.1-protein|Name=NO01G05660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bpback to top protein sequence of NO01G05660.2 >NO01G05660.2-protein ID=NO01G05660.2-protein|Name=NO01G05660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=402bpback to top Synonyms
Publications
|