NO01G05660, NO01G05660 (gene) Nannochloropsis oceanica

Overview
NameNO01G05660
Unique NameNO01G05660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3485
Alignment locationchr1:1575058..1579726 +

Link to JBrowse

Properties
Property NameValue
DescriptionBifunctional protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1575058..1579726 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00081244-alpha-hydroxytetrahydrobiopterin dehydratase activity
GO:0004488methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006729tetrahydrobiopterin biosynthetic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036428PCD_sf
IPR036291NAD(P)-bd_dom_sf
IPR020631THF_DH/CycHdrlase_NAD-bd_dom
IPR020630THF_DH/CycHdrlase_cat_dom
IPR001533Trans/pterin_deHydtase
IPR000672THF_DH/CycHdrlase
Homology
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_091347779.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerobranca gottschalkii] >SES62832.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Anaerobranca gottschalkii DSM 13577])

HSP 1 Score: 164.1 bits (414), Expect = 9.100e-37
Identity = 99/244 (40.57%), Postives = 146/244 (59.84%), Query Frame = 0
Query:    8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQ 252
            +PG  S ++V   I+RL    N+HGI+V+ PLP+H+  ++  +   I P KDVDG HS N G L+        +G   F      +P T LG +  L+ C I +  G  V+V+GRS +VG P+A L L R ATVTIAHS+  T+DL A+ ++ADV++ AVGRP++I  D +K+ A+V++VG   V  E  +VGDVD   + +V   +TP            P GVGP+T+ ML+++T+ SA R+
Sbjct:   69 LPGNTSEKEVLELIERLNNDDNIHGILVQLPLPKHIDEWK--VLDRINPQKDVDGFHSINVGNLS--------IGRDAF------VPCTPLGVIVMLEHCNIDL-TGKHVVVVGRSNIVGKPMAQLALQRHATVTIAHSR--TKDLGAITRQADVLIVAVGRPKMITKDMVKEGAIVIDVGINRV--ESGLVGDVDFDSVKEVAAQITPV-----------PGGVGPMTIAMLMHNTVLSAERR 280          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_054258185.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Propionispora sp. 2/2-37] >CUH93970.1 Bifunctional protein FolD [Propionispora sp. 2/2-37])

HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36
Identity = 96/246 (39.02%), Postives = 143/246 (58.13%), Query Frame = 0
Query:    6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQ 252
            I +P     E++   I RL +  NVHGI+V+ PLP+H+K +  +I  +I P KDVDG H  NAG+LA    GL              +P T  G ++ L++  I ++ G R +VIGRS +VG P+  LLL R ATVT+ HS+  T++L  + +EAD++V A+G+P+ + P+ +K  AV+L+VG   V E K +VGDVD   +  V   +TP            P GVG LT+ ML+++T+ +A  Q
Sbjct:   68 IRLPEAVGKEELLAVIARLNQDVNVHGILVQLPLPQHIKQYETEIVNSIDPLKDVDGFHPVNAGKLAIGEEGL--------------VPCTPNGCIRLLELADIPVE-GKRAVVIGRSNIVGKPMFHLLLARHATVTVCHSR--TQNLAEVTREADILVAAIGKPKFVTPEMVKPGAVILDVGINRVGERK-IVGDVDFEAVQDVAGAITPV-----------PGGVGVLTIAMLMHNTVRAAQLQ 284          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: OGW62222.1 (bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase [Nitrospirae bacterium RIFCSPHIGHO2_01_FULL_66_17])

HSP 1 Score: 163.3 bits (412), Expect = 1.500e-36
Identity = 103/242 (42.56%), Postives = 139/242 (57.44%), Query Frame = 0
Query:    8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLD-IWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249
            +P T S  DV   IDRL R   +HGI+V+ PLP   KP R + I   + P KDVDG+H  N G+L         +GE RF      +P T  G M  LD  K+ I+ G   +V+GRS LVG P+A+LLL R ATVTI HSKTP  DL  +C+ AD++V AVG+ R I  + +K+ AVV++VG    P+ K +VGDVD   +      +TP            P GVGP+T+ ML+ +T+ +A
Sbjct:   69 LPATTSQVDVLALIDRLNRDPAIHGILVQLPLP---KPLRSEPILYAVSPDKDVDGLHPVNVGKL--------MMGEPRF------VPCTPAGIMAMLDYYKLPIE-GKTAVVVGRSNLVGKPVAMLLLHRHATVTICHSKTP--DLAEVCRRADILVAAVGKARFIRGEMVKEGAVVIDVGINRQPDGK-LVGDVDFEAVAAKASWITPV-----------PGGVGPMTIAMLMQNTMLAA 278          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_091752288.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Propionispora vibrioides] >SEP47243.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Propionispora vibrioides])

HSP 1 Score: 162.9 bits (411), Expect = 2.000e-36
Identity = 97/243 (39.92%), Postives = 142/243 (58.44%), Query Frame = 0
Query:    6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249
            I +P   S E++   I  L +   VHGI+V+ PLPEH+KP+  +I   I+P KDVDG H  N G+LA     L              +P T  G ++ L++  + IK G R +V+GRS +VG P+  LLL R ATVT+ HS+  T+DL A+ +EAD++V A+G+P+ +  D +K  AVV++VG   V ++K +VGDVD   + +V   +TP            P GVG LT+ MLLY+T+ +A
Sbjct:   68 IRLPEQVSKEELLTVIAGLNQDPAVHGILVQLPLPEHIKPYESEILEAIQPVKDVDGFHPVNVGKLATGQEEL--------------VPCTPHGCIRLLELADLPIK-GKRAVVLGRSNIVGKPMFHLLLARHATVTVCHSR--TQDLAAITREADILVAAIGKPKFVTGDMVKPGAVVIDVGINRVGDKK-IVGDVDFDAVKEVASAITPV-----------PGGVGVLTIAMLLYNTVKAA 281          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_072905786.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerobranca californiensis] >SHJ66852.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Anaerobranca californiensis DSM 14826])

HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36
Identity = 97/244 (39.75%), Postives = 145/244 (59.43%), Query Frame = 0
Query:    8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQ 252
            + G  S ++V   +++L    N+HGI+V+ PLP+H+  ++  +   I P KDVDG HS N G L         +G   F      +P T LG +  L+ C + +  G  V+V+GRS +VG P+A L L R ATVTIAHS+  T+DL A+ ++ADV++ AVGRP++I  D +K+ AVV++VG   V  E  +VGDVD  G+ +V   +TP            P GVGP+T+ ML+++T+ SA R+
Sbjct:   69 LDGNTSEKEVLDLLEKLNNDSNIHGILVQLPLPKHIDEWK--VLDAIDPQKDVDGFHSINVGNLC--------IGRDAF------VPCTPLGVIVMLEHCNVDL-TGKHVVVVGRSNIVGKPMAQLALQRHATVTIAHSR--TKDLAAITRQADVLIVAVGRPKMITKDMVKEGAVVIDVGINRV--ESGLVGDVDFDGVKEVASQITPV-----------PGGVGPMTIAMLMHNTVLSAERR 280          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_080325358.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerovibrio lipolyticus] >SHI46816.1 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [Anaerovibrio lipolyticus DSM 3074])

HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36
Identity = 94/243 (38.68%), Postives = 142/243 (58.44%), Query Frame = 0
Query:    6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249
            + MP T + E++  EI+RL     +HGI+V+ PLP+ L+P+  ++   I P KDVDG H  N GRL      L              +P T  G ++ L++ +I ++ GA+ +VIGRS +VG P+  LLLG++ATVT+ HS+  T +LK + KEAD+VV AVG+PR +  D IK  A V++VG   +  +K +VGDVD   + ++   +TP            P GVG LT+ ML+ +T+ +A
Sbjct:   68 VEMPETTTHEELLAEINRLNNDPKIHGILVQLPLPKALQPYESEVLEAINPLKDVDGFHPVNVGRLVTGQKAL--------------VPCTPHGCIRMLELAEIPME-GAKAVVIGRSNIVGKPMLHLLLGKNATVTVCHSR--TRNLKDVVKEADIVVAAVGKPRFVTADMIKPGATVIDVGINRIVPKK-LVGDVDFDAVKELAGAITPV-----------PGGVGLLTIAMLMQNTVDAA 281          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_027396244.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerovibrio lipolyticus])

HSP 1 Score: 162.2 bits (409), Expect = 3.500e-36
Identity = 95/243 (39.09%), Postives = 142/243 (58.44%), Query Frame = 0
Query:    6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249
            + MP T + E++  EI+RL     +HGI+V+ PLP+ L+P+  ++   I P KDVDG H  N GRL      L              +P T  G ++ L++ +I ++ GA+ +VIGRS +VG P+  LLLG++ATVTI HS+  T++L  + KEAD+VV AVG+PR +  D IK  A V++VG   +  +K +VGDVD   + +V   +TP            P GVG LT+ ML+ +T+ +A
Sbjct:   68 VEMPETTTREELLAEINRLNNDPKIHGILVQLPLPKALQPYESEVLEAINPLKDVDGFHPVNVGRLVTGQKAL--------------VPCTPHGCIRMLELAEIPME-GAKAVVIGRSNIVGKPMLHLLLGKNATVTICHSR--TKNLAEVVKEADIVVAAVGKPRFVTADMIKPGATVIDVGINRIAPKK-LVGDVDFDAVKEVAGAITPV-----------PGGVGLLTIAMLMQNTVDAA 281          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_039212217.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaerovibrio lipolyticus] >KHM46323.1 5,10-methylene-tetrahydrofolate cyclohydrolase [Anaerovibrio lipolyticus])

HSP 1 Score: 161.0 bits (406), Expect = 7.700e-36
Identity = 94/243 (38.68%), Postives = 142/243 (58.44%), Query Frame = 0
Query:    6 IVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249
            + MP T + E++  EI+RL     +HGI+V+ PLP+ L+P+  ++   I P KDVDG H  N GRL      L              +P T  G ++ L++ +I ++ GA+ +VIGRS +VG P+  LLLG++ATVTI HS+  T++L  + KEAD+VV AVG+P+ +  D IK  A V++VG   +  +K +VGDVD   + +V   +TP            P GVG LT+ ML+ +T+ +A
Sbjct:   68 VEMPETTTREELLSEINRLNNDPKIHGILVQLPLPKALQPYESEVLEAINPLKDVDGFHPVNVGRLVTGQKAL--------------VPCTPHGCIRMLELAEIPME-GAKAVVIGRSNIVGKPMLHLLLGKNATVTICHSR--TKNLAEVVKEADIVVAAVGKPKFVTADMIKPGATVIDVGINRIAPKK-LVGDVDFDAVKEVAGAITPV-----------PGGVGLLTIAMLMQNTVDAA 281          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: KDQ60820.1 (hypothetical protein JAAARDRAFT_124343 [Jaapia argillacea MUCL 33604])

HSP 1 Score: 160.2 bits (404), Expect = 1.300e-35
Identity = 98/278 (35.25%), Postives = 150/278 (53.96%), Query Frame = 0
Query:    1 MDVTHIVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHL-KPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEE-----KAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQGRAAKHREKNKASIGVQPTTP 273
            M   HI +P  AS E+V  E+ +L    +V GI+V+ PL +H+       +   ++P KDVDG H+ N G L+       R  E  F       P T  G ++ L+   + I  GA  +V+GRS +VG P+A +L  RDATVT  HS+  T++L+A+ K AD++V A+G+ + ++  WIK  AVV++VGT ++P+      + +VGDVD      V   +TP            P GVGP+T+ ML+Y+TL +A RQ   A+  +     + +Q   P
Sbjct:   69 MKFKHITLPAEASVEEVVAEVSKLNEDESVSGILVQLPLGDHVGAAGERTVTEVVQPQKDVDGFHAYNIGHLS------SRACEPLF------TPCTPTGVIRLLESTGVTI-AGANAVVLGRSDIVGSPVAAMLRNRDATVTQCHSR--TKNLEAVIKNADILVSAIGKAQFVQGSWIKPGAVVIDVGTNYIPDATKKTGQRLVGDVDYASASAVASHITPV-----------PGGVGPMTVAMLMYNTLRAAERQWEEARSIKIKPLKLNIQEKVP 320          
BLAST of NO01G05660 vs. NCBI_GenBank
Match: WP_018703379.1 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Anaeromusa acidaminophila])

HSP 1 Score: 159.8 bits (403), Expect = 1.700e-35
Identity = 98/241 (40.66%), Postives = 140/241 (58.09%), Query Frame = 0
Query:    8 MPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASA 249
            +PGTAS E++   I+ L +   VHGI+V+ PLP+ L+    ++   I P KDVDG H  NAGRLA        +G+         +P T  G ++ L+M  + I+ G   +VIGRS +VG P+A LLL R+ATVTI HS+  T+DL AM ++AD++V AVG+   +  D +K  AVV++VG   +P  K + GDVD   + QV   +TP            P GVG LT+ MLL +T+ +A
Sbjct:   70 LPGTASKEELLAVIELLNQDKTVHGILVQLPLPKALRAVEQEVLLAIDPAKDVDGFHPLNAGRLA--------VGDEHL------VPCTPAGCVKMLEMAGVEIQ-GKHAVVIGRSNIVGKPMAQLLLARNATVTICHSR--TKDLAAMARQADILVAAVGKTHFVTADMVKSGAVVIDVGINRLPNGK-LAGDVDFEKVQQVAGAITPV-----------PGGVGLLTIAMLLANTVKAA 281          
The following BLAST results are available for this feature:
BLAST of NO01G05660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_091347779.19.100e-3740.57bifunctional methylenetetrahydrofolate dehydrogena... [more]
WP_054258185.11.500e-3639.02bifunctional methylenetetrahydrofolate dehydrogena... [more]
OGW62222.11.500e-3642.56bifunctional 5,10-methylene-tetrahydrofolate dehyd... [more]
WP_091752288.12.000e-3639.92bifunctional methylenetetrahydrofolate dehydrogena... [more]
WP_072905786.12.600e-3639.75bifunctional methylenetetrahydrofolate dehydrogena... [more]
WP_080325358.12.600e-3638.68bifunctional methylenetetrahydrofolate dehydrogena... [more]
WP_027396244.13.500e-3639.09bifunctional methylenetetrahydrofolate dehydrogena... [more]
WP_039212217.17.700e-3638.68bifunctional methylenetetrahydrofolate dehydrogena... [more]
KDQ60820.11.300e-3535.25hypothetical protein JAAARDRAFT_124343 [Jaapia arg... [more]
WP_018703379.11.700e-3540.66bifunctional methylenetetrahydrofolate dehydrogena... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05660.1NO01G05660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05660.2NO01G05660.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577889gene_597Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101401g1gene7665Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05660.1NO01G05660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05660.2NO01G05660.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05660 ID=NO01G05660|Name=NO01G05660|organism=Nannochloropsis oceanica|type=gene|length=3485bp
GGGAGGGAGGGATGGAAGGAGTTATAGAGACGGACGGTTGACGGAAGGCG
CTACATCCAAATGATCGGAAGGGCAAATCAAGTGACTGGCTGCATCCATG
CAACTCTGACCCCCTCCATTTCTCCCCCTCTCCCTCTCTCCACGCCCGCG
ATGACAGACGAGCTCTCTTTGCGTCCGGGCCTGGGGAAGCCTCGTGGTTC
GACAAGGTCAAGGGGGCCAAGGAGgtgagggagggagggagggagggagg
gagggagggaggaaaggggtgttggacggagacaaggagtaggtaggtct
tgttggtgcacgaggagaaagggcgcgtgctgcgcgtgctggcagtttcg
atccttccgccttcccatgctcagcctgctgtgtcatacccaccgctccc
atcctccctcccctcctccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctctttcctccagGTCGGCAT
GGACGTGACCCACATCGTCATGCCCGGTACGGCCTCCTTCGAGGACGTGC
GTGGGGAGATCGATCGCTTGGCACGGCTGTGGAATGTGCACGGCATAATG
GTGGAGCAGCCCCTCCCCGAGCACCTGAAACCCTTCCGCCTCGACATCTG
GAGGACGATTCGCCCGCACAAGgtccaggaaggagggagggagggaagga
cggagggagggaaggacggagggggggcagggcagtgatatatccatcta
tggatcaaacgttcctcgtcatgggtgaagatccatcacccaccttcccg
tccctccctccctccctccccgcctcagGACGTGGATGGCATGCACTCGG
CCAATGCCGGCCGACTCGCCGACTTTGCGTCCGGCTTGGGGCGTCTGGGA
GAACACCGgtagggagggagggagggagggagggagggagggaggtttgg
ctgtgggtgggtagagtattttggtgtcgttgaaacggaagagacgcagt
atctctccatccacccaactgctgctcctcccgcaagttgactcatccct
ccccttccttccctccctccctccctccctctccagGTTCCCTCTTGAGT
ACAACAACCTCCCCACGACGGCTCTGGGGGCTATGCAGTACCTCGACATG
TGCAAGATCGCCATTAAGCCCGGGGCGCGTGTCCTGGgtgaggagggagg
gagggagggagggagggggaggggatgattcgtgatgatagacacttacc
tctacgccctatggtcactcccggccgtcaacgtctcgttccatacctct
ccctccctccccttctccctccctccttctccagTCATCGGCCGCTCCAA
GCTTGTGGGCCTCCCCCTGGCCCTCCTTTTGCTCGGCAGGGACGCCACCG
TTACCATTGCCCACAGCAAAACCCCAACGGAGGACTTAAAAGCCATGTGC
AAGGAGGCGGATGTGGTGGTGGGCGCCGTGGGCAGACCCCGGCTCATCGA
ACCTGACTGGATCAAGAAAGgcgagtcttttcccctccctcctcccctcc
ctcctcccctccctcttgccctccctcctggctcttcgaaggcactgatt
ggtctccctcctccctccccctcctcctcccccttccttcctcctcagAT
GCCGTGGTGCTGAACGTAGGCACGACTTTCGTGCCGGAGGAGAAGGCCAT
GGTGGGTGACGTGGACAAGAGGGGGATGGGCCAAGTAACGGACCTCCTAA
CGCCCTCGCCGTATGTGGATGCCGgtacagaggacgggagggagggaggg
agggagggagggagggagggatgactgcttattgccggcgacccagctca
tggaccatttgtttcctccttcccttcctccctccctccctccctccctc
cctccctccctccccccctccctccctccctccctccctctgtccctgca
gAGACGGGCGCGGTGGGTCCTAGTGGCGTGGGACCGTTGACGTTGCCCAT
GCTCCTCTACAGCACCCTGGCCAGTGCCTTgtgagcagggagggagggag
ggagggagggaggggaggaagaaggagggaaagaggtttcctttacgctt
aatctctctcgagcccaggcatgcaaaccgtcactcccacccttccgtcc
ctccctccctccctccctccctcccttcctcagGCGACAAGGACGAGCGG
CCAAGCACCGCGAGAAGAACAAAGCGAGCATCGGAGTGCAGCCCACCACC
CCCGTCCTGACCTCCAACGAGCTCCGTGCCGCATTGGAGGGCCCAGGGGG
GTTGAAGGAGAGCGGGTGGACGCTGGGGAGAGACGAGGAAGgtaatgata
gaagagagaggagaacggagtgcgcaggagggagggcaagcacgcgcaga
aggaggacgggtgctctcctctccgaaaaacattaaattgataattttga
ttgtaacgacccctccctcactccatcccgtcctccctcccgccctccct
cccgccctccctcccagGCGGGCACCCTGTGCTGCGCAAGACGTGGCTAT
GCCGGGACTTTAAAGAGGCCACAAATCTGGTCACTGAGATCCGACGCATC
GCCGACCGCGAGAATCACCATCCGgtacgatcgaacgcccctccctccct
ccctccctccctccctccctccctctttccctctctccctccccgcttcc
ctcctcgcatgtgcttcacggattgacaagacccacgagatcccccctcc
ctccctccctccctccctccctccctctagATCCTATCCATCACCCGTCA
CAAGCCAGAGGACGGTTCCATCTGGTGCGACAACGACATGCCTTCCGACC
TGAACGTTGAGTTGTCCTCGGCCGCTGTGCAGgtaggaaagggaaggctg
gagggatggaaggaagtaaaagggcaagggtaggagggataaaataagcg
aaagagaaaggagggatttggtattttcatacgggtttgctggctccccc
tttccatctgatatacctcattctttcctcactcactccctccctccctc
cctccctccctcccttcctccctcccttcctccctctccctgcatctcca
gGACCTGACCCACTTCGACATCACGCAAGCGCGCTCCTTGTCCGCCCTGG
TCTGCGAGGCCCCGGGGGACCGAAAATATCAAGGACGAGACTGAGGCCCG
GTGATGAGGGTGGAGGGATGAAAGAAGGGGAAGAAGGAGAAGGCGAGAAG
GCGAAGGCAAGGGGAGCGCATAGGCTGTCTTTGCTTTTTTCGGGGGTGGG
GGGAGGCACTAACTCATCGTCTTTCAAGTCGGATTTTAGCAATATTTTGG
GTTAGAGGGCTAGCGGGATGGGGTTTTGGAAGGGGAGAGAAGAGAAGAGA
AAAGCGACGGGTGTTGGCATGCATGCATTTAAAGATAAAGCACGAGCTCC
AGCTTGAAAAGAACGATCCATCAAAGCAGTCGATA
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protein sequence of NO01G05660.1

>NO01G05660.1-protein ID=NO01G05660.1-protein|Name=NO01G05660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bp
MALGSSATFARAIARRIFLFTPMTHPTTARFAASASGPHFISRSSSTRRG
MFPDLPMEDDSASSSDGPTILDGRELSRRMRAAIKAQVEDFKEEHGYAPH
LAIITVGERPPEEAQRRALFASGPGEASWFDKVKGAKEVGMDVTHIVMPG
TASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDIWRTIRPHKDV
DGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGAMQYLDMCKIA
IKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPTEDLKAMCKEA
DVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVGDVDKRGMGQV
TDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALRQGRAAKHREK
NKASIGVQPTTPVLTSNELRAALEGPGGLKESGWTLGRDEEGGHPVLRKT
WLCRDFKEATNLVTEIRRIADRENHHPILSITRHKPEDGSIWCDNDMPSD
LNVELSSAAVQDLTHFDITQARSLSALVCEAPGDRKYQGRD*
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protein sequence of NO01G05660.2

>NO01G05660.2-protein ID=NO01G05660.2-protein|Name=NO01G05660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MDVTHIVMPGTASFEDVRGEIDRLARLWNVHGIMVEQPLPEHLKPFRLDI
WRTIRPHKDVDGMHSANAGRLADFASGLGRLGEHRFPLEYNNLPTTALGA
MQYLDMCKIAIKPGARVLVIGRSKLVGLPLALLLLGRDATVTIAHSKTPT
EDLKAMCKEADVVVGAVGRPRLIEPDWIKKDAVVLNVGTTFVPEEKAMVG
DVDKRGMGQVTDLLTPSPYVDAETGAVGPSGVGPLTLPMLLYSTLASALR
QGRAAKHREKNKASIGVQPTTPVLTSNELRAALEGPGGLKESGWTLGRDE
EGGHPVLRKTWLCRDFKEATNLVTEIRRIADRENHHPILSITRHKPEDGS
IWCDNDMPSDLNVELSSAAVQDLTHFDITQARSLSALVCEAPGDRKYQGR
D*
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