NO01G05600, NO01G05600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05600 vs. NCBI_GenBank
Match: XP_004251550.1 (PREDICTED: protein transport protein SFT2 [Solanum lycopersicum]) HSP 1 Score: 108.2 bits (269), Expect = 3.700e-20 Identity = 76/213 (35.68%), Postives = 110/213 (51.64%), Query Frame = 0 Query: 28 DWYAQYAQRQQAGANDDVEMGLLGNVERFFHGHGMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 DW A YA Q G++ D+ L V A+D+VSG ++ PG A + V + G L F L GV F +AF + LP +V P KFA+C TIG +GSF L GPK L + ERLPFTA +IGS++ T+Y S+++ SY+L +L +V+Q+ A +Y++++ PGG AG+R L + C Sbjct: 27 DWNA-YASTQDEGSSSDLGFDLEAAVR---------TANDKVSGTFNVVTKGVK----NLPGSFQSATSNVPS----GKSLMYFGLFLAAGVFFIFIAFTMFLPVMVLMPQKFAICFTIGCAFIIGSFFALKGPKNQLTHMTSKERLPFTALFIGSMVGTIYVSMVLHSYILSVLFSVIQVLALSYYVISYFPGGSAGMRFLSSTLTSSIFRC 221
BLAST of NO01G05600 vs. NCBI_GenBank
Match: PHT73284.1 (hypothetical protein T459_24069 [Capsicum annuum]) HSP 1 Score: 107.8 bits (268), Expect = 4.900e-20 Identity = 73/213 (34.27%), Postives = 109/213 (51.17%), Query Frame = 0 Query: 28 DWYAQYAQRQQAGANDDVEMGLLGNVERFFHGHGMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 DW A A + G++ D+ L V A+D+VSG ++ G PG A + V + G L F L GV F +AF + LP +V P KFA+C TIG +GSF L GPK L + ERLPFT +IGS++ T+Y S+++ SY+L +L +V+Q+ A +Y++++ PGG AG++ L + C Sbjct: 27 DWNAYAADQDNQGSSSDLGFDLEAAVR---------TANDKVSGTFNVVSKGVK----GLPGSFQSATSNVPS----GKSLMYFGLFLAAGVFFIFIAFTMFLPVMVLMPQKFAICFTIGCAFIIGSFFALKGPKNQLTHMTSKERLPFTGVFIGSMVGTVYVSMVLHSYILSVLFSVIQVFALSYYVISYFPGGSAGMKFLSSTLTSSILRC 222
BLAST of NO01G05600 vs. NCBI_GenBank
Match: PHU07908.1 (hypothetical protein BC332_24397 [Capsicum chinense]) HSP 1 Score: 107.8 bits (268), Expect = 4.900e-20 Identity = 73/213 (34.27%), Postives = 109/213 (51.17%), Query Frame = 0 Query: 28 DWYAQYAQRQQAGANDDVEMGLLGNVERFFHGHGMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 DW A A + G++ D+ L V A+D+VSG ++ G PG A + V + G L F L GV F +AF + LP +V P KFA+C TIG +GSF L GPK L + ERLPFT +IGS++ T+Y S+++ SY+L +L +V+Q+ A +Y++++ PGG AG++ L + C Sbjct: 27 DWNAYAADQDNQGSSSDLGFDLEAAVR---------TANDKVSGTFNVVSKGVK----GLPGSFQSATSNVPS----GRSLMYFGLFLAAGVFFIFIAFTMFLPVMVLMPQKFAICFTIGCAFIIGSFFALKGPKNQLTHMTSKERLPFTGVFIGSMVGTVYVSMVLHSYILSVLFSVIQVFALSYYVISYFPGGSAGMKFLSSTLTSSILRC 222
BLAST of NO01G05600 vs. NCBI_GenBank
Match: XP_021885683.1 (Got1/Sft2-like family-domain-containing protein [Lobosporangium transversale] >ORZ27980.1 Got1/Sft2-like family-domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 107.1 bits (266), Expect = 8.300e-20 Identity = 64/168 (38.10%), Postives = 100/168 (59.52%), Query Frame = 0 Query: 63 GDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVE--TTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRV 229 G +QVSG+ P +GG E L++ R+ GF + GV +++AFFVGLP ++ +P+KFA T+GS+ M SF++L GP H ++L+ ERLPFT AY+GS+IF LY+SL++ SY+L I+ TV++I A ++Y ++ P +R+ Sbjct: 46 GGVRNQVSGYV--------------PVSLGGTPQQEEDWLGLSWFQRMAGFAICVAGGVACFMIAFFVGLPLLLLKPSKFATSFTLGSILLMCSFALLKGPATHFKALISRERLPFTGAYVGSMIFVLYSSLVLNSYILTIIGTVIEILALLYYFTSYSPFSSGSIRL 199
BLAST of NO01G05600 vs. NCBI_GenBank
Match: XP_015059756.1 (PREDICTED: protein transport protein SFT2-like [Solanum pennellii]) HSP 1 Score: 106.3 bits (264), Expect = 1.400e-19 Identity = 76/213 (35.68%), Postives = 109/213 (51.17%), Query Frame = 0 Query: 28 DWYAQYAQRQQAGANDDVEMGLLGNVERFFHGHGMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 DW A YA Q G++ D+ L V A+D+VSG ++ PG A + V + G L F L GV F +AF + LP +V P KFA+C TIG +GSF L GPK L + ERLPFTA IGS++ T+Y S+++ SY+L +L +V+Q+ A +Y++++ PGG AG+R L + C Sbjct: 27 DWNA-YASTQDEGSSSDLGFDLEAAVR---------TANDKVSGTFNVVTKGVK----NLPGSFQSATSNVPS----GKSLMYFGLFLAAGVFFIFIAFTMFLPVMVLMPQKFAICFTIGCAFIIGSFFALKGPKNQLTHMTSKERLPFTALSIGSMVGTIYVSMVLHSYILSVLFSVIQVLALSYYVISYFPGGSAGMRFLSSTLTSSIFRC 221
BLAST of NO01G05600 vs. NCBI_GenBank
Match: OAQ23196.1 (SFT2-domain-containing protein [Mortierella elongata AG-77]) HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19 Identity = 69/178 (38.76%), Postives = 107/178 (60.11%), Query Frame = 0 Query: 61 GMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVE--TTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKG 237 G G A ++ S + G + + G + G GGA+ E L + R+ GF + G+ +++AFFVGLP +V +P+KFA T+GS+ M SF++L GP AHL++L ERLPFT AY+GS+IF L++SL + +Y L I+ TV++I A ++Y ++ P +R LG + G Sbjct: 33 GSGSAFNRASDWFGGVRSQVSGYVPISMG--GGAQPQEEDWLGLTWFQRMAGFAICVAGGLACFMIAFFVGLPLLVIKPSKFATSFTLGSILFMASFALLKGPVAHLKALFSRERLPFTGAYLGSMIFVLFSSLYLNNYFLTIIGTVIEIFALLYYFTSYSPFSGGSIR-LGSRMASG 207
BLAST of NO01G05600 vs. NCBI_GenBank
Match: XP_019194703.1 (PREDICTED: protein transport protein SFT2-like [Ipomoea nil]) HSP 1 Score: 105.5 bits (262), Expect = 2.400e-19 Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 0 Query: 28 DWYAQYAQRQQAGANDDVEMGLLGNVERFFHGHGMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 DW A A A DD LG F + A+D V+G G +R PG A +TV + G L F L GV F +AF + LP +V P KFA+C TIG +GSF L GPK L +L ERLPFTA +IGS++ T+Y S+++ SY+L +L +VVQ+ A +Y +++ PGG G++ L + C Sbjct: 27 DWNA------YAAAKDDEASSSLG----FDLEAAVRTANDTVTGTFGVVSKGVR----DLPGNFQSATSTVPS----GKALMYFGLFLSAGVFFIFIAFTMFLPVMVIMPQKFAICFTIGCAFIIGSFFALKGPKNQLSHMLSKERLPFTAVFIGSMVGTVYVSMVMHSYILCVLFSVVQVLALAYYAISYFPGGSTGMKFLSSTLASSILRC 221
BLAST of NO01G05600 vs. NCBI_GenBank
Match: KZT05222.1 (SFT2-domain-containing protein [Laetiporus sulphureus 93-53]) HSP 1 Score: 104.4 bits (259), Expect = 5.400e-19 Identity = 77/199 (38.69%), Postives = 106/199 (53.27%), Query Frame = 0 Query: 42 NDDVEMGLLGNVERFFHGHGMGDAHDQVSGF-AGRFITSIRGDGEGNPGLVGGAKATVET---TLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKG 237 ++ E N+ +F G GDA +G GRF G G L + E L+ RL GF G LL + + +AFF LP + RPAKFAL ++GS+ M FSVL+GP HL+ L+ ERLPF+ AYI SL TLY SL SY+ ++ ++Q+ A V Y+LA+ PGG LR G + ++G Sbjct: 2 SNSTEQSFRSNLAQFRWAQGNGDATQDAAGTPPGRFSRFYNAIGGGYIPLRSTERTNDEEAYFALSRWERLLGFGGCLLGAAVCFFVAFFT-LPLLALRPAKFALAFSLGSLLVMFGFSVLIGPINHLKHLVSKERLPFSIAYISSLAITLYFSLGAHSYVGSLIGAIIQVVALVSYVLAYFPGGVTTLRFGGQMALRG 199
BLAST of NO01G05600 vs. NCBI_GenBank
Match: XP_006352003.1 (PREDICTED: protein transport protein SFT2-like [Solanum tuberosum]) HSP 1 Score: 104.0 bits (258), Expect = 7.000e-19 Identity = 75/213 (35.21%), Postives = 108/213 (50.70%), Query Frame = 0 Query: 28 DWYAQYAQRQQAGANDDVEMGLLGNVERFFHGHGMGDAHDQVSGFAGRFITSIRGDGEGNPGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 DW A YA Q G++ D+ L V A+D+ SG +R PG A + V + G L F L GV F +AF + LP +V P KFA+C TIG +GSF L GPK L + ERLPFTA +IGS++ T+Y S+++ SY+L +L +V+Q+ A +Y++++ PGG G+R L + C Sbjct: 27 DWNA-YAATQDEGSSSDLGFDLEAAVR---------TANDKFSGTFNVVTKGVR----DLPGSFQFATSNVPS----GKSLMYFGLFLAAGVFFIFIAFTMFLPVMVLMPQKFAICFTIGCAFIIGSFFALKGPKNQLTHMTSKERLPFTALFIGSMVGTIYVSMVLHSYILSVLFSVIQVLALSYYVISYFPGGSVGMRFLSSTLTSSIFRC 221
BLAST of NO01G05600 vs. NCBI_GenBank
Match: XP_009390596.1 (PREDICTED: protein transport protein SFT2 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 103.2 bits (256), Expect = 1.200e-18 Identity = 62/153 (40.52%), Postives = 89/153 (58.17%), Query Frame = 0 Query: 88 PGLVGGAKATVETTLNYGARLRGFVGLLLLGVLFYLLAFFVGLPAIVFRPAKFALCATIGSVCTMGSFSVLVGPKAHLQSLLVWERLPFTAAYIGSLIFTLYASLIVRSYLLVILSTVVQIGAFVWYLLAFLPGGPAGLRVLGGIIVKGFTGC 241 PG+ A ++V + G L F LL GV F ++AF + LP +V P KFALC T+G +GSF L GPK L + ERLPFT +IGS++ T+Y S+++ SY+L +L +V+Q+ A +Y +++ PGG GLR L I C Sbjct: 79 PGIFQSATSSVPS----GKSLMYFGLLLASGVFFIVVAFTMFLPVMVLMPQKFALCFTLGCALIIGSFFALKGPKNQLAHMFSMERLPFTLVFIGSMVGTIYVSMVLHSYILSVLFSVIQVVALSYYSVSYFPGGSTGLRFLSSSITSSILKC 227 The following BLAST results are available for this feature:
BLAST of NO01G05600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05600 ID=NO01G05600|Name=NO01G05600|organism=Nannochloropsis oceanica|type=gene|length=1016bpback to top protein sequence of NO01G05600.1 >NO01G05600.1-protein ID=NO01G05600.1-protein|Name=NO01G05600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=254bpback to top Synonyms
Publications
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