NO01G05390, NO01G05390 (gene) Nannochloropsis oceanica

Overview
NameNO01G05390
Unique NameNO01G05390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1428
Alignment locationchr1:1457951..1459378 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1457951..1459378 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032719WbsX
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_051173185.1 (hypothetical protein [Thermodesulfobacterium hveragerdense])

HSP 1 Score: 123.6 bits (309), Expect = 1.600e-24
Identity = 111/389 (28.53%), Postives = 179/389 (46.02%), Query Frame = 0
Query:   91 AEVHRHI--QPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPLK-NL---LGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLENFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTG------------TEIRLLKTVGDSITQENGF-DGIELVMDSKEGMYPYFSGYYLHANYKSAKAKEFMNTSTRPKHIDYKAYVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERLL 461
            +E  +H+  +  A Y PQF+PIPEN++ + +G+T+ TN+  A    P+ L   + NL   LGFYDL +  EV  RQI++AK +G+AGF  Y YWFS         + ++ +D FF+  + +F+    + NE WT+   +        +   +T E     + ++  Y  H NY KI  RPV+ +   H++               + RL + +  ++   N + D  ++  D+     P F    L    K  +    +N   +    DY   V   L K K    +   I +   ++DNT R       RQ +         T     S  L+K++L   +KK  +   P  ++  INAWNEW E   +EP  + G+AYL+A  E +L
Sbjct:  251 SETRKHLPFKLIAFYLPQFHPIPENDLWWGKGFTEWTNVTKAM---PNFLGHYQPNLPIDLGFYDL-RVPEVRKRQIEMAKKYGIAGFCFYVYWFSGK------RLLEKPVDAFFEDEVLDFNFCISWANENWTRR--WDGKANEVLMPQIHTYETDCRFIHDMAKYLAHKNYLKIEGRPVILVQRAHDLADPVRTAEYWKSFCIKQRLGEPILVAVHCFNFYEDPNQIGFDAALEFPPLFRKPTLE---KINQHALLLNPDFQGAIFDYNQAVEVSLNKPK---PDYRYIRTALVSWDNTPR-------RQDQ--------ATIFAFSSPYLYKKWLSFLIKKTFEAKFPEERLVFINAWNEWAEGNHLEPDRKHGYAYLQATAEAIL 606          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_052347757.1 (glycosyl hydrolase [Imhoffiella purpurea] >EXJ16678.1 hypothetical protein D779_3992 [Imhoffiella purpurea])

HSP 1 Score: 123.2 bits (308), Expect = 2.100e-24
Identity = 110/387 (28.42%), Postives = 178/387 (45.99%), Query Frame = 0
Query:  101 AIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTP-LKNLLGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLENFSLFFVYC--NEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELV-MDSKEGMYPYFSGYYLHANYKSAKAKEFMNTSTRPKHIDYKAYVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDV-----------GNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQ-IFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERLLLTPLPDSALSN 472
            A Y PQF+PIPEN+  + +G+T+ TN+V  + + P    P L   LGFYDL +  EV+ RQ+ +AK +G+ GFA Y+YWF+   +  + +          D +     L F  C  NE+W++   +        IA  ++ E+  A + +  +Y R P Y ++R RP+L ++ P E+  + +   +       Q NG   + L    S E   P        A Y    A EF   ++ P  I  +         E++  D    I   +T +    R YA    R F  V           G  A+F+    G S + ++E+L+  ++    + D +S+ +  +NAWNEW E   +EP    G+AYL+A ++ L  T    +A  N
Sbjct:   86 AFYLPQFHPIPENDAWWGKGFTEWTNVVRGRPQFPGHYQPHLPGELGFYDL-RVPEVMARQVALAKLYGIGGFAFYHYWFNGRRLLERPL---------EDYLRSGLDLPFCICWANESWSRR--WDGRANEILIAQEHSPEDDIAFIASAASYLRDPRYIRVRGRPLLLVYRP-ELLPSPVETARR-WRHWCQNNGVGDLYLAYTQSFESADP--------ARYGFDAAIEFPPNNSHPVAITKRI--------ERRNRDFKGMIYD-WTVYPEQSRHYAPCRYRLFRGVNPSWDNEARRPGCGAIFL----GSSPSGYREWLENAIRDTLDRFDDMSERLVFVNAWNEWAEGAHLEPDQRYGYAYLQATRDALEGTGTSQTAQIN 437          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_073330313.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium carnipullorum] >SHL64149.1 Glycosyltransferase WbsX [Chryseobacterium carnipullorum])

HSP 1 Score: 123.2 bits (308), Expect = 2.100e-24
Identity = 106/393 (26.97%), Postives = 180/393 (45.80%), Query Frame = 0
Query:   95 RHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPL-KNLLGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLE----NFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSKE---------GMYPYFSGYYL-----HANYKS-AKAKEFMNTSTRP----KHIDYKAYVREFLPKEKKLGD------NASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQE 458
            +HI+  A Y PQ++PIPEN+  + +G+T+ TN+  AK        P+    LG+YDL +  EV  +Q ++A+ +G+ GF  Y+YWF +          +++++R  + VLE    +F   F + NE W+  V  G            T+E++ A+   L+ +F+   Y K+ N+PV  ++    +       L+   D + +ENGFDG+ L+  +K          G     S  +L     H N K    AK++     +     K +D+K  V +       + D      +  T   + +N+DNT R     G+R      N      +   ++V   K+      K YSQK        ++ +WNEW E  ++EP  + G+ YLEA ++
Sbjct:    2 KHIKTLAFYLPQYHPIPENDEWWGKGFTEWTNVGKAKPLFEGHEQPICPGDLGYYDL-RVPEVREQQAQMARDYGVHGFIYYHYWFGNG---------KQLLERIANEVLESGKPDFPFCFCWANETWS-GVWHGLENKILAEQVYPTDEDLIAHFNYLLPFFKDKRYIKVDNKPVFVVYDAININEKSPEYLEKFTD-LAKENGFDGLYLIASNKTEDDHGYKELGYQAKISNAFLRAWRPHMNQKPYISAKQYYTNRLKGILGLKTVDFKKPV-DIQNAPDVINDLHFDETDVDTFPCLISNWDNTPR----SGNRGIILGNNSPALFEKQVEKAVNFLKD------KNYSQK------FLVVKSWNEWAEGNILEPDRKNGYGYLEALKK 365          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_066221099.1 (methyltransferase domain-containing protein [Arcobacter cryaerophilus])

HSP 1 Score: 122.9 bits (307), Expect = 2.700e-24
Identity = 109/397 (27.46%), Postives = 178/397 (44.84%), Query Frame = 0
Query:   88 KHFAEVHRHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLL------TPLKNLLGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLENFSLFFVYC----NEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHH----PHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSKEGMY-PYFSGYYLHANYKSAKA--------KEFMNTSTRPKHIDYKAYVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLD--VQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERL 460
            K   +++  ++P A Y PQF+P PEN+  + +G+T+ TN+  AK   P+ +       P+ N  GFYDL +  EV+  Q ++AK++G+ GF  YYYWF+   +  K           F+ +L++  +   +C    NE WT+   +        IA  +++ + K  ++N+  YF  P Y ++ N+PVL ++     P+    T I   + +      + GF+GI LV     G+  P   G+     +    A        K  +N        DY   V E   KE+    N     ++  ++DNT R   H             +F       S+ L+K++L    +   Y+Q      +   INAWNEW E   +EP  + G+ YLEA  E L
Sbjct:  250 KEQKKINSLLKPIAFYLPQFHPFPENDEWWGKGFTEWTNVTKAK---PNFIGHYQPHLPIHN--GFYDL-RIPEVMIEQARLAKNYGIYGFNFYYYWFNGKVLMQKP----------FEILLQHKEIDINFCITWANENWTR--TWDASENEVLIAQRHSDIDSKEFIRNIFQYFEDPRYIRVNNKPVLIIYRCDIIPNIFETTLIWREEVI------KAGFEGIHLVCAQTYGIKDPEPYGFDAAIEFPPHNALSIENKIHKTLLNQEFTGSIFDYAKVVEEQCIKER---PNYKCYETLMLSWDNTARKQNHSN-----------IF----SNFSLDLYKDWLSNIAEHTFYNQNIPNEEKFVFINAWNEWAEGTHLEPDIKYGYGYLEATYEVL 604          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: SIQ71295.1 (Glycosyltransferase WbsX [Chryseobacterium sp. RU33C])

HSP 1 Score: 122.9 bits (307), Expect = 2.700e-24
Identity = 100/400 (25.00%), Postives = 179/400 (44.75%), Query Frame = 0
Query:   95 RHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLENFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLV-------TYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSK---------------------EGMYPYF--SGYYLHANYKSAKAKEFM--NTSTRPKHI--DYKAYVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERL 460
            + I+P A Y PQ++P+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  +V  +Q +IAK +G+ GF  Y+YWF      ++  + + + +    +   +F   F + NE W+     G   G   +A     E V  N Q+L+        +F+   Y K+ N+P+  ++HP  +   +   +    + + ++NGFD + ++  +K                     +   PY     Y  H  Y   +  E +      +PK +  D KA V +     + +  N +T   V  N+DNT R             G + + +T T   S  LF++ ++  +     K+D   ++ +I +WNEW E  ++EP  + GF YL   ++ L
Sbjct:    3 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVAKAKPLFEGHDQPIYPADLGYYDL-RVPQVREQQAQIAKDYGVHGFIYYHYWF-----GNRKQLLERIANDVLTSKKPDFPFCFCWANETWS-----GIWHG---LAEKILAEQVYPNEQDLIDHFNYLLPFFKDERYIKVDNKPLFIVYHPEHLNEGDPYYISKFRE-LAKKNGFDDLYVMASNKLRDDIDLKSMGYDGKISNAFQKAWVPYIKKGEYISHYQYYKNRITELLGFKKKIKPKVLTQDAKAVVNDL----QFVESNVATYPCVLPNWDNTPR------------SGYRGVVLTDT---SPELFEKQIEKAIDYLEDKNDYPEKLLIIKSWNEWAEGNILEPDRKYGFGYLNTLKKIL 368          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_076596039.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium sp. RU33C])

HSP 1 Score: 122.9 bits (307), Expect = 2.700e-24
Identity = 100/400 (25.00%), Postives = 179/400 (44.75%), Query Frame = 0
Query:   95 RHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLENFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLV-------TYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSK---------------------EGMYPYF--SGYYLHANYKSAKAKEFM--NTSTRPKHI--DYKAYVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERL 460
            + I+P A Y PQ++P+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  +V  +Q +IAK +G+ GF  Y+YWF      ++  + + + +    +   +F   F + NE W+     G   G   +A     E V  N Q+L+        +F+   Y K+ N+P+  ++HP  +   +   +    + + ++NGFD + ++  +K                     +   PY     Y  H  Y   +  E +      +PK +  D KA V +     + +  N +T   V  N+DNT R             G + + +T T   S  LF++ ++  +     K+D   ++ +I +WNEW E  ++EP  + GF YL   ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVAKAKPLFEGHDQPIYPADLGYYDL-RVPQVREQQAQIAKDYGVHGFIYYHYWF-----GNRKQLLERIANDVLTSKKPDFPFCFCWANETWS-----GIWHG---LAEKILAEQVYPNEQDLIDHFNYLLPFFKDERYIKVDNKPLFIVYHPEHLNEGDPYYISKFRE-LAKKNGFDDLYVMASNKLRDDIDLKSMGYDGKISNAFQKAWVPYIKKGEYISHYQYYKNRITELLGFKKKIKPKVLTQDAKAVVNDL----QFVESNVATYPCVLPNWDNTPR------------SGYRGVVLTDT---SPELFEKQIEKAIDYLEDKNDYPEKLLIIKSWNEWAEGNILEPDRKYGFGYLNTLKKIL 367          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_079240160.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium indologenes])

HSP 1 Score: 122.9 bits (307), Expect = 2.700e-24
Identity = 94/393 (23.92%), Postives = 181/393 (46.06%), Query Frame = 0
Query:   95 RHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLE----NFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSKEGMYPYFSGYYLHANYKSAKAKEFMNTSTRPKHIDYKAYVRE-------FLPKEK---KLGD-------------NASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERL 460
            + I+P A Y PQ++P+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  EV  +Q ++AK +G+ GF  Y+YWF            +++++R  + VL+    +F   F + NE W+  +  G             E+++ A+ + L+ +F+   Y K+ N+P+  ++ P+ +   +   +    + + +ENGFDG+ ++  +K      F      +   +A  K ++    + ++I +  Y +        F  KE+   ++ D             N  T   +  N+DNT R             G + + +      S  LF++ ++  ++    K +   Q  ++ +WNEW E  ++EP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVSKAKPLFEGHEQPIFPADLGYYDL-RVPEVREQQAQMAKDYGVHGFIFYHYWFGSG---------KQLLERVANDVLKSGKPDFPFCFCWANETWS-GIWHGLSEKILAEQTYPDEQDLIAHFEYLLPFFKDERYIKVDNKPLFIIYDPNHLNEGDPNYISKFRE-LARENGFDGLYVMASNKLSDAIDFQSMGYDSKISNAFQKAWVPHINKKEYISHSQYYKNRIKGLIGFKKKEQPKVRIQDAQEVVNDLKFEESNVPTYPCILPNWDNTPR------------SGYRGIILA---NNSPELFEKQIEKAVEYLEDKKNYPEQFLIVKSWNEWAEGNILEPDRKNGFGYLNALKKIL 367          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_095382998.1 (lipopolysaccharide biosynthesis protein [Flavobacterium sp. IR1] >PAM94233.1 hypothetical protein B4N84_14285 [Flavobacterium sp. IR1])

HSP 1 Score: 122.9 bits (307), Expect = 2.700e-24
Identity = 113/390 (28.97%), Postives = 175/390 (44.87%), Query Frame = 0
Query:   97 IQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTP-LKNLLGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLENFSLFFVYC--NEAWTKNVAFGTHRGGYTIANNYT-EENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGI---------ELVMDSKEGMYPYFSGYYLHANYKSAKAKEFMNTSTRPK-----------HIDYKA------YVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQ 457
            IQ  A Y PQ++PIPEN+  + +G+T+ TN+  ++        P L   LGFYDL +  E+  +Q K+AK +G+ GF  Y YWF  +      M+ ++  +       +N  L F +C  NE W K +  G       I   Y  EE  ++    L+ +F+   Y KI N+P+  ++ P E+   ++ L   + + +  E+GF GI         E V+ + E         ++   Y S K   F   + R K           HID +A      Y R       KL +N S I  VF N+DNT R             G KA+    ++     +++E L   + K + KS    QI +I +WNEW E   +EP  + G  +LEA +
Sbjct:    8 IQFLAYYLPQYHPIPENDEWWGKGFTEWTNVSKSQPLFKGHYQPILPGELGFYDL-RVPEIQEQQSKLAKEYGVDGFIYYQYWFGKDK-----MLLEKPAEAMLKN--KNIDLPFCFCWANETW-KGIWHGLKNDAILIEQTYEGEEAYRSYFNYLLPFFKDNRYIKIDNKPMFHIYKPDEI--PDVNLFFKLFNDLAVEHGFAGICFIATICSEEFVLSNSEIYGKVGVDVFMQMRYGSQKDNLFSKVNRRVKKIINKKLKLNYHIDKRAKPLIFDYKRGVEKLNSKLHNNKS-IPCVFPNWDNTAR------------SGKKALIFKNSKPE---IWQEHLQKAVDKLT-KSPQNPQIVVIKSWNEWAEGNYLEPDYKFGLKWLEALK 369          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_047422312.1 (hypothetical protein [Chryseobacterium sp. YR480])

HSP 1 Score: 122.5 bits (306), Expect = 3.600e-24
Identity = 93/393 (23.66%), Postives = 183/393 (46.56%), Query Frame = 0
Query:   95 RHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPL-KNLLGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLE----NFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSKEGMYPYFSGYYLHANYKSAKAKEFMNTSTRPKHIDYKAYVREFL-------PKEK---KLGDNASTINS-------------VFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERL 460
            + I+P A Y PQ++P+PEN+  + +G+T+ TN+  AK        P+    LG+YDL +  EV  +Q ++AK +G+ GF  Y+YWF +          +++++R  + VL+    +F   F + NE W+  +  G             E+++ A+ + L+ +F+   Y K+ N+P++ ++ P+ +   +   +    + + +ENGFDG+ ++  +K      F      +   +A  K ++    + ++I +  Y +  +        KE+   ++ D  + +N              +  N+DNT R             G + + +      S  +F++ ++   K    K D   Q  ++ +WNEW E  ++EP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVGKAKPLFEGHEQPIYPGDLGYYDL-RVPEVREQQAQMAKDYGVHGFIYYHYWFGNG---------KQLLERVANDVLKSGKPDFPFCFCWANETWS-GIWHGLSEKILAQQVYPDEQDLAAHFEYLLPFFKDDRYIKVDNKPLIIIYDPNHLNDGDPHYISKFRE-LAKENGFDGLYVMASNKLRDDLDFKSMGYDSKISNAFQKAWIPHIDKKEYISHSQYYKNRIKGLIGIKKKEQPKVRIQDAQAVVNDLKFEESNVPTYPCILPNWDNTPR------------SGYRGIILA---NNSPEIFEQQVEKAAKYLEDKKDYPEQFLIVKSWNEWAEGNILEPDRKNGFGYLNALKKIL 367          
BLAST of NO01G05390 vs. NCBI_GenBank
Match: WP_105683251.1 (lipopolysaccharide biosynthesis protein [Chryseobacterium culicis] >PRB83523.1 lipopolysaccharide biosynthesis protein [Chryseobacterium culicis] >PRB89765.1 lipopolysaccharide biosynthesis protein [Chryseobacterium culicis])

HSP 1 Score: 122.5 bits (306), Expect = 3.600e-24
Identity = 97/397 (24.43%), Postives = 179/397 (45.09%), Query Frame = 0
Query:   95 RHIQPYAIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPLKNL-LGFYDLVQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFDTVLE----NFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVTYFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIELVMDSK---------------------EGMYPYFS--GYYLHANYKSAKAKEFMNTSTRP----KHIDYKAYVREFLPKEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGRSVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFAYLEAFQERL 460
            + I+P A Y PQ++P+PEN+  + +G+T+ TN+  A+        P+    LG+YDL +  EV   Q +IAK +G+ GF  Y+YWF            +++++R  + VL+    +F   F + NE W+  +  G             E+++ A+ + L+ +F+   Y K+ N+P+  ++ P+ +   +   +    + + +ENGFDG+ ++  +K                     +   P+ +   Y  H+ Y   + K  +    +     +  D KA V +   +E     N +T   V  N+DNT R             G + + +      S  LF++ ++   +    K D   Q  ++ +WNEW E  ++EP  + GF YL A ++ L
Sbjct:    2 KKIKPLAFYLPQYHPVPENDEWWGKGFTEWTNVSKAQPLFEGHEQPIFPADLGYYDL-RVPEVREHQAQIAKDYGVHGFIFYHYWFGSG---------KQLLERVANDVLKSGKPDFPFCFCWANETWS-GIWHGLSEKILAEQTYPDEQDLIAHFEYLLPFFKDERYIKVDNKPLFIIYDPNHLNEGDPHYISKFRE-LAKENGFDGLYVMASNKLSDDIDFQSMGYDSKISNAFHKAWIPHINKKEYISHSQYYKNRIKGLIGIKKKEQPKVRIQDAKAVVNDLKFEE----SNVATYPCVLPNWDNTPR------------SGYRGIILA---NNSPELFEQQVEKAAQYLEDKKDYPEQFLIVKSWNEWAEGNILEPDRKNGFGYLNALKKIL 367          
The following BLAST results are available for this feature:
BLAST of NO01G05390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_051173185.11.600e-2428.53hypothetical protein [Thermodesulfobacterium hvera... [more]
WP_052347757.12.100e-2428.42glycosyl hydrolase [Imhoffiella purpurea] >EXJ1667... [more]
WP_073330313.12.100e-2426.97lipopolysaccharide biosynthesis protein [Chryseoba... [more]
WP_066221099.12.700e-2427.46methyltransferase domain-containing protein [Arcob... [more]
SIQ71295.12.700e-2425.00Glycosyltransferase WbsX [Chryseobacterium sp. RU3... [more]
WP_076596039.12.700e-2425.00lipopolysaccharide biosynthesis protein [Chryseoba... [more]
WP_079240160.12.700e-2423.92lipopolysaccharide biosynthesis protein [Chryseoba... [more]
WP_095382998.12.700e-2428.97lipopolysaccharide biosynthesis protein [Flavobact... [more]
WP_047422312.13.600e-2423.66hypothetical protein [Chryseobacterium sp. YR480][more]
WP_105683251.13.600e-2424.43lipopolysaccharide biosynthesis protein [Chryseoba... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05390.1NO01G05390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05390.1NO01G05390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05390 ID=NO01G05390|Name=NO01G05390|organism=Nannochloropsis oceanica|type=gene|length=1428bp
ATGGGTGCAATTGCCAACCGGATTGCTGTGGAGAACAACACCGCAAAATA
TATCGCCACTGACAATACTGATGTGATCCAAAAGTTTGAGGCTTTGCTCT
CCTTTATTCGAAAACACGCTGGCTTGCGAGAGAATGGCGAGCTGTTGTCC
GTGCTTGAAAAGGAAAATCTCGTCGAAATGCCAGACTTTTACGATAACCT
CTTTTTTAAAAGCGCTTTAGATATCATCAAGTGCGTCCAAGGAAACCACG
ACAATTTAGCCAAGCATTTCGCCGAAGTCCATCGCCATATTCAACCATAT
GCTATCTATTTCCCTCAATTTTATCCCATCCCTGAAAATAATGTCAATTT
CTATGAGGGCTACACGGATATGACGAATTTAGTCGCAGCCAAACTGGAGG
ATCCCAGCTTACTGACACCACTGAAAAATCTGTTGGGCTTTTACGATTTG
GTGCAAAACGTGGAGGTAATTCCAAGGCAAATCAAGATTGCAAAGTCATT
TGGCATGGCTGGATTTGCCATTTATTACTATTGGTTCAGCGACAATTCTA
TTAGCCACAAACACATGATCTTCCAAGAGGTGATAGATCGCTTTTTTGAC
ACTGTATTAGAGAATTTCTCACTCTTCTTTGTGTATTGCAATGAAGCGTG
GACAAAGAACGTGGCTTTTGGAACGCATAGGGGTGGATACACGATTGCTA
ACAACTATACTGAAGAGAACGTCAAGGCGAATATGCAAAATCTCGTCACG
TATTTTAGACACCCAAATTATCGCAAAATCAGAAATCGGCCGGTCCTCTT
TTTGCACCACCCGCATGAAATGACAGGTACAGAGATTCGCTTGTTGAAGA
CAGTTGGCGATTCAATAACTCAAGAGAACGGTTTTGATGGCATTGAACTG
GTCATGGACAGCAAGGAAGGGATGTACCCATATTTCTCTGGCTACTACTT
GCATGCAAATTACAAATCCGCAAAAGCCAAGGAGTTCATGAACACGTCAA
CCCGCCCCAAGCATATCGACTACAAAGCGTATGTGCGCGAATTCTTGCCG
AAGGAAAAGAAGTTGGGAGACAATGCGAGCACGATAAACTCAGTTTTCAC
AAATTTTGACAACACCGTGCGTTTTTATGCCCACGAAGGGGACCGACAAT
TCGAGGATGTGGGCAACAAGGCAATGTTCATGACACGGACTCAAGGAAGA
AGTGTCACGCTTTTTAAGGAGTTTTTAGATGTGCAACTTAAGAAATACTC
TCAAAAGTCTGATCCCATTTCACAGATATTCCTCATCAATGCTTGGAACG
AATGGGGTGAGCAAATGGTGATGGAGCCGTCGAATGAAGAGGGATTTGCT
TACCTTGAAGCCTTTCAGGAGAGATTATTACTTACCCCTCTTCCAGATAG
CGCACTTAGCAATGCATGGAATCAATGA
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protein sequence of NO01G05390.1

>NO01G05390.1-protein ID=NO01G05390.1-protein|Name=NO01G05390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MGAIANRIAVENNTAKYIATDNTDVIQKFEALLSFIRKHAGLRENGELLS
VLEKENLVEMPDFYDNLFFKSALDIIKCVQGNHDNLAKHFAEVHRHIQPY
AIYFPQFYPIPENNVNFYEGYTDMTNLVAAKLEDPSLLTPLKNLLGFYDL
VQNVEVIPRQIKIAKSFGMAGFAIYYYWFSDNSISHKHMIFQEVIDRFFD
TVLENFSLFFVYCNEAWTKNVAFGTHRGGYTIANNYTEENVKANMQNLVT
YFRHPNYRKIRNRPVLFLHHPHEMTGTEIRLLKTVGDSITQENGFDGIEL
VMDSKEGMYPYFSGYYLHANYKSAKAKEFMNTSTRPKHIDYKAYVREFLP
KEKKLGDNASTINSVFTNFDNTVRFYAHEGDRQFEDVGNKAMFMTRTQGR
SVTLFKEFLDVQLKKYSQKSDPISQIFLINAWNEWGEQMVMEPSNEEGFA
YLEAFQERLLLTPLPDSALSNAWNQ*
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Synonyms
Publications