NO01G05330, NO01G05330 (gene) Nannochloropsis oceanica

Overview
NameNO01G05330
Unique NameNO01G05330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3265
Alignment locationchr1:1421178..1424442 -

Link to JBrowse

Properties
Property NameValue
DescriptionBranched-chain-amino-acid aminotransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1421178..1424442 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036038Aminotransferase-like
IPR001544Aminotrans_IV
Homology
BLAST of NO01G05330 vs. NCBI_GenBank
Match: XP_009822242.1 (branched-chain amino acid aminotransferase [Aphanomyces astaci] >ETV87379.1 branched-chain amino acid aminotransferase [Aphanomyces astaci])

HSP 1 Score: 504.6 bits (1298), Expect = 2.900e-139
Identity = 222/367 (60.49%), Postives = 288/367 (78.47%), Query Frame = 0
Query:   53 ADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            A +D     I +TT P+AK P+++L FG  FSDH+LE+DWD   GW  P I P+ PL++ PAAS LHYAL+CFEGMKA+ D  G++RLFRP+LNM R+N+S+ RL++P  +++  IEC+K+L+  D+ W+P+GDGYS+Y+RPT +ST+PF+GVGA+ + K+Y I+SPVGPYYPEGFNP++L+AD   VRAWPGG GNTK+GGNYGPTI PQM+A K G +Q+LWL GE H VTE G MN+  +WINEQGEKEL+TAPL RGDILPGVTR+SILELARGWGEFKVTE  + M  +VKA  EGRLLE FG+GTA V+ P+K I Y GK+V+   +    + G LT R+W+ +TDIQYG++EH WSV+I+
Sbjct:   26 AGLDASKTIIHQTTHPKAKTPKEKLTFGSTFSDHLLEVDWDKTSGWGAPLIRPYGPLAIDPAASSLHYALQCFEGMKAYIDDKGKIRLFRPELNMKRMNSSMERLFLPTFDSDELIECLKKLILLDQSWIPQGDGYSLYIRPTGVSTHPFIGVGASSKAKVYVILSPVGPYYPEGFNPVKLFADDKYVRAWPGGTGNTKVGGNYGPTIMPQMEAAKKGYSQILWLFGEEHLVTEAGTMNLFVYWINEQGEKELVTAPLTRGDILPGVTRQSILELARGWGEFKVTETTITMPSIVKAEQEGRLLEVFGSGTAAVISPVKLINYNGKDVNVPLDAPDGKSGQLTKRIWNEMTDIQYGRVEHPWSVVIN 392          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: XP_008861338.1 (branched-chain amino acid aminotransferase [Aphanomyces invadans] >ETW09927.1 branched-chain amino acid aminotransferase [Aphanomyces invadans])

HSP 1 Score: 503.4 bits (1295), Expect = 6.600e-139
Identity = 222/367 (60.49%), Postives = 286/367 (77.93%), Query Frame = 0
Query:   53 ADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            A +D     I +T  P+AK P+++L FG  FSDH+LEIDWD   GW  P I P+ PL++ PAAS LHYAL+CFEGMKA+ D  G++RLFRPDLNM R+N S+ RL++P  +++  IEC+K+L+  D+ W+PEGDGYS+Y+RPT +ST+PF+GVGA+ + K+Y I+SPVGPYYPEGFNP++L+AD   VRAWPGG GNTK+GGNYGPTI PQM+A K G +Q+LWL GE+H VTE G MN+  FWINEQGEKEL+TAPL RGDILPGVTR+SILE+ RGWGEFKVTE  + M  +VKA  EGRLLE FG+GTA V+ P++ I Y GK+V+   +    + G LT R+W+ +TDIQYG++EH WSV+I+
Sbjct:   26 AGLDASKTIIHQTPHPKAKTPKEKLTFGTTFSDHLLEIDWDKNSGWGAPLIRPYGPLAIDPAASSLHYALQCFEGMKAYIDSKGKIRLFRPDLNMKRMNNSMERLFLPTFDSDELIECLKKLILLDKSWIPEGDGYSLYIRPTGVSTHPFIGVGASSKAKVYVILSPVGPYYPEGFNPVKLFADDKYVRAWPGGTGNTKVGGNYGPTIMPQMEAAKKGYSQILWLFGEDHLVTEAGTMNLFVFWINEQGEKELVTAPLTRGDILPGVTRQSILEMTRGWGEFKVTEHTITMPAIVKAQQEGRLLEVFGSGTAAVISPVQLINYNGKDVNVPLDAPDGKSGQLTKRIWNEMTDIQYGRVEHPWSVVIN 392          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: OQR99282.1 (branched-chain-amino-acid aminotransferase [Achlya hypogyna])

HSP 1 Score: 491.1 bits (1263), Expect = 3.400e-135
Identity = 214/367 (58.31%), Postives = 289/367 (78.75%), Query Frame = 0
Query:   53 ADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            A +D     + +TT P+ KVP+++L FG  F+DHMLEIDWD + GW  P I P+ PL++ PA+S LHYAL+CFEGMKA+ + +G++RLFRPD+NMAR+N S+ RL++P  +++  I+CI++L++ D+DW+P+GDGYS+YLRPT IST+P +GVGA+ + K++ I+SPVGPYYPEGFNP++L+AD   VRAWPGG GNTK+GGNYG TI PQ++A K G +Q+LWL GE+H VTEVG MN+  +WINE+GEKEL+TAPL RGDILPGVTR SIL+L RGWGEFKV+E  + M  +VKA  EGRLLE FG+GTA V+ P++ I Y G++++   + E  + G LT R+W  +TDIQYG+ EH WSV+I+
Sbjct:   24 APLDSSKTIVHKTTNPKPKVPKEQLTFGTTFTDHMLEIDWDQKSGWGTPLIRPYGPLNIDPASSSLHYALQCFEGMKAYINDDGKIRLFRPDMNMARMNNSMERLFLPTFDSDELIKCIEQLIKLDKDWIPKGDGYSLYLRPTGISTHPHIGVGASTKAKVFVILSPVGPYYPEGFNPVKLFADDKYVRAWPGGTGNTKVGGNYGATIMPQIEAAKKGYSQILWLFGEDHYVTEVGTMNLFVYWINEEGEKELVTAPLHRGDILPGVTRDSILQLTRGWGEFKVSEHTITMPSIVKAQKEGRLLEVFGSGTAAVISPVQLINYNGEDINVPLDAEDGKSGKLTKRIWKEMTDIQYGRTEHPWSVVIE 390          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: OQS05329.1 (branched-chain-amino-acid aminotransferase [Thraustotheca clavata])

HSP 1 Score: 488.8 bits (1257), Expect = 1.700e-134
Identity = 219/367 (59.67%), Postives = 286/367 (77.93%), Query Frame = 0
Query:   53 ADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            A +D     I +TT P+AK+ +++L FG  FSDHMLEIDWD EKGW  P I P+ PL++ PA+S LHYAL+CFEGMKA+ + +G++RLFRPD+NMAR+N+S+ RL++P  +++  IECIK+LV  D+DW+P+GDGYS+YLRPT IST+P +GV A+ + K++ I+SPVGPYYPEGF P++LYAD   VRAWPGG GNTK+GGNYG TI PQ +A+K G +Q+LWL GE H VTEVG MN+  +WINE GEKEL+TAPL RGDILPGVTR SIL+L RGWGEFKVTE  + M  +VKA  EGRLLE FG+GTA ++ P++ I Y G +++   + E  + G LT R+W  +TDIQYG++EH WSV+I+
Sbjct:   24 AGVDSTKTIIHQTTHPKAKLEKEKLKFGTTFSDHMLEIDWDAEKGWGKPLIRPYGPLNIDPASSSLHYALQCFEGMKAYINDDGKIRLFRPDMNMARMNSSMERLFLPTFDSKEMIECIKQLVLLDKDWIPKGDGYSLYLRPTGISTHPHIGVSASSKAKVFVILSPVGPYYPEGFAPVKLYADDKYVRAWPGGTGNTKIGGNYGSTIMPQYEASKKGYSQILWLFGEEHFVTEVGTMNLFVYWINENGEKELVTAPLHRGDILPGVTRDSILQLTRGWGEFKVTEHTITMPSIVKAQKEGRLLEIFGSGTAAIISPVELINYNGVDINVPLDAEDGKSGKLTKRIWKEMTDIQYGRVEHPWSVVIN 390          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: XP_012195859.1 (hypothetical protein SPRG_01903 [Saprolegnia parasitica CBS 223.65] >KDO33090.1 hypothetical protein SPRG_01903 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 486.1 bits (1250), Expect = 1.100e-133
Identity = 220/367 (59.95%), Postives = 281/367 (76.57%), Query Frame = 0
Query:   53 ADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            A +D     I +T  P+AKVP++ L FG  F+DHMLEIDWD   GW  P I P+ PLS+ PA+S LHYAL+CFEGMKA+ + +G++RLFRPD+NMAR+N S+ RL++P  ++E  I+CI++LV  D+DW+P+GDGYS+YLRPT IST+P +GVGA+ + K++ I+SPVGPYYPEGFNP++L+AD   VRAWPGG GNTK+GGNYG TI PQM+A K G +Q+LWL GE H VTEVG MN+  +WINE GEKEL+TAPL RGDILPGVTR SILEL RGWGEFKV+E  + M  +VKA  EGRLLE FG+GTA V+ P+K I Y G ++    + E  + G LT R+W  +TDIQYG+  H WSV+I+
Sbjct:   24 AGLDSSKTIIHKTMHPKAKVPKETLTFGTTFTDHMLEIDWDQTTGWGKPLIRPYGPLSVDPASSSLHYALQCFEGMKAYINDDGKIRLFRPDMNMARMNNSMERLFLPTFDSEELIKCIEQLVLLDKDWIPKGDGYSLYLRPTGISTHPHIGVGASTKAKVFVILSPVGPYYPEGFNPVKLFADDTYVRAWPGGTGNTKVGGNYGATIMPQMEANKKGYSQILWLFGEEHFVTEVGTMNLFVYWINEDGEKELVTAPLHRGDILPGVTRDSILELTRGWGEFKVSEHTITMPSIVKAQKEGRLLEIFGSGTAAVISPVKLINYNGVDLDVPLDAEDGKSGQLTKRIWKEMTDIQYGRKPHPWSVVIN 390          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: XP_008612383.1 (branched-chain amino acid aminotransferase [Saprolegnia diclina VS20] >EQC34071.1 branched-chain amino acid aminotransferase [Saprolegnia diclina VS20])

HSP 1 Score: 483.8 bits (1244), Expect = 5.400e-133
Identity = 218/367 (59.40%), Postives = 282/367 (76.84%), Query Frame = 0
Query:   53 ADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            A +D     I +T  P+AKV ++ L FG  F+DHMLEIDWD + GW  P I P+ PLS+ PA+S LHYAL+CFEGMKA+ + +G++RLFRPD+NMAR+N S+ RL++P  ++E  I+CI++LV  D+DW+P+GDGYS+YLRPT IST+P +GVGA+ + K++ I+SPVGPYYPEGFNP++L+AD   VRAWPGG GNTK+GGNYG TI PQM+A K G +Q+LWL GE H VTEVG MN+  +WIN+ GEKEL+TAPL RGDILPGVTR SILEL RGWGEFKV+E  + M  +VKA  EGRLLE FG+GTA V+ P+K I Y G+++    + E  + G LT R+W  +TDIQYG+  H WSV+I+
Sbjct:   24 AGLDSTKTIIHKTMHPKAKVAKETLTFGTTFTDHMLEIDWDQKTGWGKPLIRPYGPLSVDPASSSLHYALQCFEGMKAYINDDGKIRLFRPDMNMARMNNSMERLFLPTFDSEELIKCIEQLVLLDKDWIPKGDGYSLYLRPTGISTHPHIGVGASTKAKVFVILSPVGPYYPEGFNPVKLFADDTYVRAWPGGTGNTKVGGNYGATIMPQMEANKKGYSQILWLFGEEHFVTEVGTMNLFVYWINDAGEKELVTAPLHRGDILPGVTRDSILELTRGWGEFKVSEHTITMPSIVKAQKEGRLLEIFGSGTAAVISPVKLINYNGEDIDVPLDAEDGKSGQLTKRIWKEMTDIQYGRKPHPWSVVIN 390          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: OWZ04820.1 (Branched-chain amino acid aminotransferase [Phytophthora megakarya])

HSP 1 Score: 462.2 bits (1188), Expect = 1.700e-126
Identity = 207/370 (55.95%), Postives = 276/370 (74.59%), Query Frame = 0
Query:   50 ANGADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            + GADI    + I+RT++P+AK+P+++L FGK F+DHMLE+DW+  KGW  P I P+ P+S+ PA++VLHYALECFEGMKA+ D +G +RLFRPD+NM RLN+S+ RL +P  + +   +C++EL+R DRDWVP+G+GYS+Y+RPT IST   +GVGA+++ KL+ I+SPVGPYYPEGFNP++L A+   +RAWPGG G  K+G NY P I PQ  A   G +Q LW+ GE+H +TEVG MN+   WINEQGEKEL+T PL RGDILPG+TR SIL L R W EFKVTE  + MK+V KA+ EGR++E FG+GTA VV P+  I Y  ++++   EG   + G L  RVW  L+DIQYG+ EH WS+ +D
Sbjct:   21 STGADIKASNLQIERTSSPKAKLPKEQLQFGKTFTDHMLEVDWEMGKGWGNPVIHPYGPISMDPASAVLHYALECFEGMKAYVDADGHIRLFRPDMNMKRLNSSMKRLLLPEFDGDELTKCLEELIRLDRDWVPKGEGYSLYIRPTGISTQASIGVGASEKAKLFIILSPVGPYYPEGFNPVKLLANDRYIRAWPGGTGGYKVGANYAPGILPQYAANGQGYSQNLWIFGEDHEITEVGTMNLFIHWINEQGEKELVTPPLTRGDILPGITRDSILHLTREWNEFKVTEGNINMKQVQKASKEGRIIEIFGSGTAAVVSPVSTINYMDEDLAIPLEGTDGKAGKLAERVWKELSDIQYGRCEHPWSIRVD 390          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: GAX96662.1 (branched-chain amino acid aminotransferase [Pythium insidiosum])

HSP 1 Score: 462.2 bits (1188), Expect = 1.700e-126
Identity = 209/368 (56.79%), Postives = 271/368 (73.64%), Query Frame = 0
Query:   52 GADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            GADI    + +Q T  P+ K+P+++L FG  FSDHMLE+DW+   GW  P I P+ PLS+ PA++ LHYALECFEGMKA+KD  GR+RLFRPD+NM RLN+S+ RL +P  + +   EC+KEL+R DRDWVPEGDGYS+Y+RPT IST+P++GVGA+ + K++ I+SPVGPYYPEGFNP++LYA+   +RAWPGG G+ K+G NY P I PQ  A   G +Q LW+ G +H VTEVG MN+   WINE+GE+EL T PL RGDILPG+TR SIL LAR W EFKV++R V MK++ KA  EGR+LE FG+GTA +V P+  I Y  +++     G   + G L  R W  LTDIQYG++EH WSV++D
Sbjct:   29 GADIKASNIEVQLTKQPKVKLPKEKLTFGTTFSDHMLEVDWEKGHGWGKPLIRPYGPLSMDPASACLHYALECFEGMKAYKDAEGRVRLFRPDMNMKRLNSSMKRLLLPQFDEDELTECLKELLRVDRDWVPEGDGYSLYIRPTGISTHPYIGVGASLKAKIFIILSPVGPYYPEGFNPVKLYANDTFIRAWPGGTGSYKVGANYAPGILPQAAAGAKGYSQNLWIFGADHEVTEVGTMNLFIHWINEKGEEELATPPLSRGDILPGITRDSILTLAREWKEFKVSDRNVTMKQIQKAVHEGRVLEVFGSGTAAIVSPVSTINYMEEDLKIPLSGTDGKAGKLAERFWKELTDIQYGRVEHPWSVIVD 396          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: XP_002898400.1 (branched-chain-amino-acid aminotransferase [Phytophthora infestans T30-4] >EEY63223.1 branched-chain-amino-acid aminotransferase [Phytophthora infestans T30-4])

HSP 1 Score: 459.5 bits (1181), Expect = 1.100e-125
Identity = 205/370 (55.41%), Postives = 277/370 (74.86%), Query Frame = 0
Query:   50 ANGADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            + GADI    + ++RT+TP++K+P+++L FGK F+DHMLE+DW+  KGW  P I P+ P++L PA++VLHYALECFEGMKA+ D +G +RLFRPD+NM RLN S+ RL +P  + + F +C++EL+R D++WVP+G+GYS+Y+RPT IST   +GVGA+++ KL+ I+SPVGPYYPEGFNP++L A+   +RAWPGG G  K+G NY P I PQ  A + G +Q LW+ G +H +TEVG MN+   WINEQGEKELIT PL RGDILPG+TR SIL L R W EFKVTE  + MK++ KAN EGR+LE FG+GTA VV P+  I Y  ++++   +G   + G L  RVW  L+DIQYG+ EH WS+++D
Sbjct:   21 STGADISFANLKVERTSTPKSKLPKEQLKFGKTFTDHMLEVDWELGKGWGNPVIHPYGPMALDPASAVLHYALECFEGMKAYVDADGHIRLFRPDMNMKRLNNSMKRLLLPEFDGDEFTKCLEELIRLDKEWVPKGEGYSLYIRPTGISTQASIGVGASEKAKLFIILSPVGPYYPEGFNPVKLCANDRYIRAWPGGTGGFKVGANYAPGILPQYDAQEQGYSQNLWIFGPDHDITEVGTMNLFIHWINEQGEKELITPPLTRGDILPGITRDSILHLTREWNEFKVTEGNINMKQLQKANKEGRILEIFGSGTAAVVSPVSTINYMNEDLAIPLDGTDGKAGKLAERVWKELSDIQYGRREHPWSIVVD 390          
BLAST of NO01G05330 vs. NCBI_GenBank
Match: XP_009518351.1 (hypothetical protein PHYSODRAFT_349622 [Phytophthora sojae] >EGZ23063.1 hypothetical protein PHYSODRAFT_349622 [Phytophthora sojae])

HSP 1 Score: 459.1 bits (1180), Expect = 1.400e-125
Identity = 205/370 (55.41%), Postives = 275/370 (74.32%), Query Frame = 0
Query:   50 ANGADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHPPRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARLNTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTYPFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNTKLGGNYGPTIRPQMQATKLGCAQVLWL-GENHTVTEVGAMNVLFFWINEQGEKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKANDEGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGE--QVGPLTIRVWDALTDIQYGKIEHAWSVLID 417
            + GADI    + ++RTTTP+AK+P+++L FGK F+DHMLE+DW+  KGW  P I P+ P+++ PA++VLHYALECFEGMKA+ D  G +RLFRPD+NM RLN S+ RL +P  + +   +C+ EL+R DRDWVP+G+GYS+Y+RPT IST   +GVGA+++ KL+ I+SPVGPYYPEGFNP++L A+   +RAWPGG G  K+G NY P I PQ  A + G +Q LW+ GE+H +TEVG MN+   WINEQGEKELIT PL RGDILPG+TR SIL L R W EFKVTE  + MK++ KA+ EGR++E FG+GTA VV P+  I Y  ++++   +G   + G L  R+W  L+DIQYG+ EH WS+++D
Sbjct:   21 STGADIKLANLQVERTTTPKAKLPKEQLKFGKTFTDHMLEVDWELGKGWGNPAIHPYGPIAMDPASAVLHYALECFEGMKAYVDAEGHIRLFRPDMNMKRLNNSMKRLLLPEFDGDELTKCLAELIRIDRDWVPKGEGYSLYIRPTGISTQASIGVGASEKAKLFIILSPVGPYYPEGFNPVKLCANDRYIRAWPGGTGGYKVGANYAPGILPQYDAHEQGYSQNLWIFGEDHEITEVGTMNLFIHWINEQGEKELITPPLTRGDILPGITRDSILHLTREWNEFKVTEGNINMKQLQKASKEGRIIEVFGSGTAAVVSPVSTINYMDEDLAIPLDGTDGKSGKLAERIWKELSDIQYGRREHPWSIVVD 390          
The following BLAST results are available for this feature:
BLAST of NO01G05330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009822242.12.900e-13960.49branched-chain amino acid aminotransferase [Aphano... [more]
XP_008861338.16.600e-13960.49branched-chain amino acid aminotransferase [Aphano... [more]
OQR99282.13.400e-13558.31branched-chain-amino-acid aminotransferase [Achlya... [more]
OQS05329.11.700e-13459.67branched-chain-amino-acid aminotransferase [Thraus... [more]
XP_012195859.11.100e-13359.95hypothetical protein SPRG_01903 [Saprolegnia paras... [more]
XP_008612383.15.400e-13359.40branched-chain amino acid aminotransferase [Saprol... [more]
OWZ04820.11.700e-12655.95Branched-chain amino acid aminotransferase [Phytop... [more]
GAX96662.11.700e-12656.79branched-chain amino acid aminotransferase [Pythiu... [more]
XP_002898400.11.100e-12555.41branched-chain-amino-acid aminotransferase [Phytop... [more]
XP_009518351.11.400e-12555.41hypothetical protein PHYSODRAFT_349622 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05330.1NO01G05330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551337gene_566Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05330.1NO01G05330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05330 ID=NO01G05330|Name=NO01G05330|organism=Nannochloropsis oceanica|type=gene|length=3265bp
AGGCAGCAAGGCCCATGTCCACGGCGGCGGCAACAGCGGCGGCGGCGGCA
ATGCGGCGGAGCCTTCTCCTGGGCTGTAGCAGCAGGAGCAGCGGCCGTCG
CGTCCTCCCGCCCCTTCACCTTCTGCCGCAGCAACGGCACCACCGACTAC
ACAACGAGGCCGCAAATGGCGCTGATATTGACgtacgtggacagcttttg
gtcgaaaggggcggggaggaattggagggaggtgtgagggaggtagacag
gcagataggcatgcttactttctatttccaccacccttgcagCCCAAGCT
CATGACCATCCAACGGACAACAACCCCAAGGgtaagtgccgcatcttcgc
acatttcttttccctcgctcccggctaccaacaggtatccacccatttcc
cgtcgtccaattcattttcccctcccctctttcctccctcctttcttcct
cctgattaatctgccacttctcgctcagGCCAAGGTGCCACAGAAGGAGC
TTGTGTTCGGCAAAGTATTTAGCGATCACATGCTCGAAATCGACTGGGAC
GACGAGAAGgtgagagggcacggggaggctggacgaaagaacaggggagg
aggaagggaggaaaagagggagggagggaatgagggaggggtgtggcaag
aaagatccgaggcggcgggcatgagctcgatcgaagctgagattgcatgg
atttataaatcgttggtgtttgtctgccgttctcgaccagtgtaccctcc
tagacctccctcattccctctctccctccctacctgcctgcctccgtcct
tccgcagGGCTGGCACCCCCCGAGGATATCCCCCTTCCATCCGCTCTCTC
TCTCCCCCGCCGCCTCCGTCCTCCATTACGCCCTAGAGTGCTTCGAAGGG
ATGAAGGCCTTCAAAGACATCAACGGTCGGTTACGTCTCTTCCGTCCAGA
TTTGAACATGGCGAGGCTCAACACCTCCCTGGCCCGCCTGTACATGCCGg
tagggggggggggagggagggagggaaggagggagagaaaggggcaggta
aaatgacccgatgtggcttttttcacgcaccctgcttttttgggggtcga
atgtgcaataatcgctcctacagGCTGTAAATGCCGAGGCCTTCATAGAG
TGCATCAAgtaagtccctccctccctgcttctctccttccctccctccct
ccttccctccttccctccctccctcccgtccatctttctccacttgccaa
cactctttcctcccctcccttcctccctcttcaccccctcctcccagGGA
GCTCGTCCGACAAGACCGGGACTGGGTCCCTGAGGGCGACGGTTACTCCA
TTTACCTCCGGCCCACGGCCATCTCGACCTATgtacgtctcgagagagga
agggagggaggaaaggtgtggataaggacctgggagagaggaggctctgc
cttgtgttttggcggcatagttccttttcaattctaccactcgcgctcac
ccttctctctcttcccttgcccttccctccctccctccctccagCCCTTC
CTGGGCGTGGGCGCCACCAAGGAGATCAAGCTCTACTGCATCATGAGCCC
CGTCGGGCCATACTACCCGGAAGGCTTCAATCCCATCAGACTCTACGCGG
ACACCCTCAATGTCCGCGCTTGGCCAGGCGGCGTGGGCAACACCAAAgtg
cggtccctccctccctccctccctcccttcctccgtcccttcctctctcc
ctcgtctcgttatggctgactggcttctctccctctttccctctttccct
ctctccctccgccattctctccttccccctacagCTGGGTGGGAACTACG
GCCCGACCATCCGCCCGCAGATGCAGGCAACCAAGTTAGGCTGCGCTCAG
gtaggagtgtcctcccttccctccctccctccctccctccctccctccct
ccctccctccctccctccctcccaatcttgctccctccctccctcccttc
ctccctccctccctccctccctcccttcctcccaatcttgctccatcctt
cgcgcactttccgtcatccccttgcctctttcccaagGTGCTGTGGTTGG
GCGAAAACCACACAGTCACAGAAGTGGGGGCTATGAACGTCCTCTTCTTC
TGGATCAACGAACAAGgtgcgtttcaccctccttccttccctccctccct
ccctccctccctccctccttccttccctccctctctcctcccctccctcc
ctccctccccttcttgatttctgccttcatcctgttgcaggcaaggggaa
atccccgattgctgcgccctggcacaactgtaaccctccctccctccctc
cctccctccctccctccctccctccctccctccctccagGCGAGAAAGAG
CTCATAACTGCCCCTCTTTGCAGAGGGGACATTCTCCCCGGCGTTACCCG
CCGCTCCATTTTGGAGCTGGCTCGTGGGTGGGGAGAGTTTAAGGTGACAG
AGCGGGCCGTGGGTATGAAGGAGGTGGTTAAGGCAAACGATGAGGGGAGG
gtaagtctcatcgatcctgcgccccccctccccctgtcctcctcccatcc
ctcctttccctttcgcgcgctaaattgctcgttgcttgtcgcctctcatt
ccaccccctcccccctctcctccgttcctcctcccttattccctcagCTC
CTCGAGGCCTTTGGGGCAGGCACGGCCGTGGTGGTGTGTCCAATTAAGGG
CATTTTATATCAAGGCAAAGAGGTGTCTTTCATCAAGGAGGGGGAGCAGG
TGGGCCCCCTCACAATAAGGGTTTGGGATGCACTGACCGACATCCAGgta
atacacggcccccctccttccctccctccctccctccctcccttcctccc
cagatgtctccacagtttcatccttcttgtcatcacccctccctctctcc
catcccccctcctcccccccctcaccctgccatttcttagTACGGCAAGA
TTGAACATGCCTGGAGTGTCCTGATTGACTGAGCGCAAGGATATCGGGAA
TGAGAGGGGGAGGGGGAGGATGGGAAGGAGGAAGGGATGGAGGGCATGTG
AAGGGAGCAGTGGGAGCAGCAGCTAGCGCGGCATGTACATAGCAGGGGAG
GAGGGAGAGAGGGGAGAAGCCGAAGGGCCAATGGCGAGGTTGGACAAAAG
GAAAAACCTTCGGAGACAACGAGGACCTCGTACGAAAAAGGGAGATGTGC
AGGGAAAGGGGGGGT
back to top

protein sequence of NO01G05330.1

>NO01G05330.1-protein ID=NO01G05330.1-protein|Name=NO01G05330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MSTAAATAAAAAMRRSLLLGCSSRSSGRRVLPPLHLLPQQRHHRLHNEAA
NGADIDPKLMTIQRTTTPRAKVPQKELVFGKVFSDHMLEIDWDDEKGWHP
PRISPFHPLSLSPAASVLHYALECFEGMKAFKDINGRLRLFRPDLNMARL
NTSLARLYMPAVNAEAFIECIKELVRQDRDWVPEGDGYSIYLRPTAISTY
PFLGVGATKEIKLYCIMSPVGPYYPEGFNPIRLYADTLNVRAWPGGVGNT
KLGGNYGPTIRPQMQATKLGCAQVLWLGENHTVTEVGAMNVLFFWINEQG
EKELITAPLCRGDILPGVTRRSILELARGWGEFKVTERAVGMKEVVKAND
EGRLLEAFGAGTAVVVCPIKGILYQGKEVSFIKEGEQVGPLTIRVWDALT
DIQYGKIEHAWSVLID*
back to top
Synonyms
Publications