NO01G03930, NO01G03930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03930 vs. NCBI_GenBank
Match: CBJ30752.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 96.3 bits (238), Expect = 2.100e-16 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 0 Query: 213 MMNLTGMXXXXXXXXTVPLTEIVNADEVLRSGVLSDPAVQEQLIPLLAEGQQTPEQLEAIMHSPQFRSTLGSLTGALQTDNFNSIMSNFGLDAS--RGMEALSAGNNVDAFLQAL 326 MMN+ G+ + L + V+AD + SG L DP VQE L+PLL EG QT E+L + SPQ + +L SL+ AL++DNFN+IMS+F LD S R EA++ G+ V+AF+QAL Sbjct: 1 MMNIAGL-APQRRQPALSLRDAVDADAIEASGFLDDPEVQEALLPLLPEGNQTAEELRETIRSPQLQQSLSSLSRALRSDNFNNIMSSFELDPSNPRSAEAMARGDGVEAFVQAL 114
BLAST of NO01G03930 vs. NCBI_GenBank
Match: GAY03270.1 (proteasomal ubiquitin receptor ADRM1like protein put [Pythium insidiosum]) HSP 1 Score: 96.3 bits (238), Expect = 2.100e-16 Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 4 FFGSFVPTTREYVTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHVDELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQYQ 98 F GS E V+F AG+ V+ N KFL+TPD +KG++ L + D+L H QW DR T +D I P DA F++VNTGRE DRVY+LQY+ Sbjct: 12 FGGSNGAGRNELVSFNAGKMTVKPSANGKFLVTPDLKKGKICLTRGDDQLLHFQWVDRQTGASPDDFILFPDDAAFSKVNTGREGDRVYLLQYK 105
BLAST of NO01G03930 vs. NCBI_GenBank
Match: POM63091.1 (Proteasomal ubiquitin receptor ADRM1-like protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 94.7 bits (234), Expect = 6.000e-16 Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 9 VPTTREYVTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHVDELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQYQ 98 +P E V+F AG+ V+ N KFL+TP KG++ L + D+L H QW DR T ED I P DA+FA+V+TGR DRVYILQY+ Sbjct: 1 MPEQNELVSFNAGKMTVKPSANGKFLVTPQLEKGKVCLSRGDDQLLHFQWVDRQTGASPEDFIIFPDDAHFAKVDTGRPDDRVYILQYK 89
BLAST of NO01G03930 vs. NCBI_GenBank
Match: KUF80692.1 (Proteasomal ubiquitin receptor ADRM1 [Phytophthora nicotianae]) HSP 1 Score: 94.4 bits (233), Expect = 7.800e-16 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 0 Query: 3 RFFGSFVPTT---REYVTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHVDELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQYQ 98 +F F P+T E V+F AG+ V+ N KFL+TP KG++ L + D+L H QW DR T ED I P DA+FA+V+TGR DRVYILQY+ Sbjct: 8 QFGNVFAPSTAGRNELVSFNAGKMTVKPTANGKFLVTPQLEKGKVCLSRGDDQLLHFQWVDRQTGASPEDFIIFPDDAHFAKVDTGRPDDRVYILQYK 105
BLAST of NO01G03930 vs. NCBI_GenBank
Match: GAY03274.1 (proteasomal ubiquitin receptor ADRM1like protein put [Pythium insidiosum]) HSP 1 Score: 94.4 bits (233), Expect = 7.800e-16 Identity = 153/452 (33.85%), Postives = 197/452 (43.58%), Query Frame = 0 Query: 4 FFGSFVPTTREYVTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHVDELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQYQ------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTRVPG------PSAAVTXXXXXXXXXXXTGR----------------------GGQLTAADLQRAMMNLTGMXXXXXXXXTVPLTEIVNADEVLRSGVLSDPAVQEQLIPLLAEGQQTPEQLEAIMHSPQFRSTLGSLTGALQTDNFNSIMSNFGLDASRGMEALSAGNNVDAFLQAL 326 F GS E V+F AG+ V+ N KFL+TPD +KG++ L + D+L H QW DR T +D I P DA F++VNTGRE DRVY+LQY+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ PG P+A V+ XXXXXXXX G +T AD QRAM +L M V LT++++A+ V + +L D A L+P L EG Q +L+ + SPQFR ++GSL ALQT N++++++NFGLD + G L+ G++V AFL A+ Sbjct: 12 FGGSNGAGRNELVSFNAGKMTVKPSANGKFLVTPDLKKGKICLTRGDDQLLHFQWVDRQTGASPDDFILFPDDAAFSKVNTGREGDRVYLLQYKNSSRRFFFWMQHKDASRDEELAKKVNDYMNNAQPAGADGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTEEELLRLAIEESMRDANPNTGNSSSDNDYSGGRSDAPGSRAAQAPAAVVSPQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGAITTADFQRAMASLQAMMGQQQPKG-VSLTKLLSAENV--APLLQDEAAVNALLPHLPEGVQNAFELQQTLRSPQFRQSIGSLVSALQTGNYHAVITNFGLDPAAGAAKLTYGDSVGAFLDAI 460
BLAST of NO01G03930 vs. NCBI_GenBank
Match: OWZ07961.1 (Proteasomal ubiquitin receptor ADRM1, partial [Phytophthora megakarya]) HSP 1 Score: 91.7 bits (226), Expect = 5.100e-15 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0 Query: 14 EYVTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHVDELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQYQ 98 E V+F AG+ V+ N KFL+TP KG++ L + D+L H QW DR T ED I P DA+FA+V+TGR DRVYILQY+ Sbjct: 22 ELVSFNAGKMSVKASANGKFLVTPQLEKGKVCLSRGDDQLLHFQWMDRQTGASPEDFIIFPDDAHFAKVDTGRVDDRVYILQYK 105
BLAST of NO01G03930 vs. NCBI_GenBank
Match: CBJ30753.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.9 bits (224), Expect = 8.600e-15 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 0 Query: 16 VTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHV-DELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQ 96 ++FKAG+ DV DKG KF ITPD RKG ++L K D+L H WK+R + TVV+D+I +P +A + +V+TGRE +RV++++ Sbjct: 23 LSFKAGKMDVSDKGGEKFHITPDLRKGTISLFKGPDDQLMHFAWKERPSGTVVDDIIILPEEAVYKKVDTGREGERVFLME 103
BLAST of NO01G03930 vs. NCBI_GenBank
Match: XP_009535166.1 (hypothetical protein PHYSODRAFT_564524, partial [Phytophthora sojae] >EGZ10305.1 hypothetical protein PHYSODRAFT_564524, partial [Phytophthora sojae]) HSP 1 Score: 90.5 bits (223), Expect = 1.100e-14 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 14 EYVTFKAGRCDVEDKGNNKFLITPDRRKGQLTLLKHVDELTHLQWKDRTTNTVVEDVIAMPHDAYFARVNTGREKDRVYILQYQ 98 E V+F AG+ V+ N KFL+TP KG++ L + D+L H QW DR T ED I P DA+FA+V+TGR +DRV+ILQY+ Sbjct: 22 ELVSFNAGKMTVKPTANGKFLVTPQLEKGKVCLSRGDDQLLHFQWVDRQTGASPEDFIIFPDDAHFAKVDTGRPEDRVFILQYK 105
BLAST of NO01G03930 vs. NCBI_GenBank
Match: OWY97004.1 (Proteasomal ubiquitin receptor ADRM1, partial [Phytophthora megakarya]) HSP 1 Score: 89.7 bits (221), Expect = 1.900e-14 Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 0 Query: 208 DLQRAMMNLTGMXXXXXXXXTVPLTEIVNADEVLRSGVLSDPAVQEQLIPLLAEGQQTPEQLEAIMHSPQFRSTLGSLTGALQTDNFNSIMSNFGLDASRGMEALSAGNNVDAFLQALLA 328 DLQRAM + + V L+++++A+ + S +L DPA E L+ L EG QTP +L A + SPQ R ++GSL ALQT NFN++M+NFGLD S G L+ G+ V A L A+ A Sbjct: 77 DLQRAMASFQQL----TQPKPVSLSKLLSAENM--SIILDDPACVEALVQHLPEGSQTPAELRATLRSPQLRQSIGSLVSALQTGNFNAVMANFGLDPSAGAAKLAFGDGVGALLAAIQA 190
BLAST of NO01G03930 vs. NCBI_GenBank
Match: XP_008899958.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETI54618.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK94492.1 hypothetical protein, variant [Phytophthora parasitica] >ETL47868.1 hypothetical protein, variant [Phytophthora parasitica] >ETM00979.1 hypothetical protein, variant [Phytophthora parasitica] >ETM54155.1 hypothetical protein, variant [Phytophthora parasitica] >ETN15247.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETP24461.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP52409.1 hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-14 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0 Query: 229 VPLTEIVNADEVLRSGVLSDPAVQEQLIPLLAEGQQTPEQLEAIMHSPQFRSTLGSLTGALQTDNFNSIMSNFGLDASRGMEALSAGNNVDAFLQALLA 328 V LT++++AD + +L DPA E L+ L EG QTP +L A + SPQ R ++GSL ALQT NFN++M+NFGLD S G L+ G+ V A L A+ A Sbjct: 205 VALTKLLSADNL--GSILDDPASVEALLQHLPEGSQTPAELRATLRSPQLRQSIGSLVNALQTGNFNAVMANFGLDPSAGASKLAFGDGVGALLAAIQA 301 The following BLAST results are available for this feature:
BLAST of NO01G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03930 ID=NO01G03930|Name=NO01G03930|organism=Nannochloropsis oceanica|type=gene|length=1457bpback to top protein sequence of NO01G03930.1 >NO01G03930.1-protein ID=NO01G03930.1-protein|Name=NO01G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=355bpback to top Synonyms
Publications
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