NO01G03920, NO01G03920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_005538674.1 (hypothetical protein CYME_CMR473C [Cyanidioschyzon merolae strain 10D] >BAM82638.1 hypothetical protein CYME_CMR473C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 112.1 bits (279), Expect = 2.400e-21 Identity = 63/171 (36.84%), Postives = 94/171 (54.97%), Query Frame = 0 Query: 30 PVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGY----------IRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLTFDSQYLQDGM 191 P+ T +GLRYYD +G+G SP WG + ++++ Y A+P +L + T R YL+KHG+GR I G++E +HTMR G RR++VP L Y LGP+P + R L ++LE+ E +V+D+EL + D D GYY D+ ++DGM Sbjct: 121 PLGKVTATGLRYYDFVEGDGTSPDWGDLCVVEFVLYSVPRPRAAPGSSAAPAIRLRPWYSTGGR--GYLIKHGDGRTIAGIEEAIHTMREHGRRRVIVPPRLAYVHADLGPVPDRTWTRLRLAKKLEEGEL------LVFDLELRKVMKDPKDRGYYKDI-----IVRDGM 278
BLAST of NO01G03920 vs. NCBI_GenBank
Match: CEL93820.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 111.7 bits (278), Expect = 3.100e-21 Identity = 73/197 (37.06%), Postives = 102/197 (51.78%), Query Frame = 0 Query: 3 ISFSSPSPFQPPSAF-AATNSVQDSDLPPVA----FKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYAR------KTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLE---LGYTKT---GLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLTFD 183 +SF PS P F A + S PP A F TKSG+ + D +G G +P+WGQ EGY++ S V + + A + L+ HGNGR IRGL+E +HTMR GG RR++VP L Y T P P N +R R L + + P G+ ++DV+LV ++D+EAD GY++D D Sbjct: 125 LSFPRPSEALPEGFFDAVFKPFEPSKQPPPAPKNGFITKSGVIFSDFEQGTGPTPRWGQFVSAFVEGYMKTDRESAPVQYFSSQAELKGKYGRGEMLMHHGNGRTIRGLEEAIHTMRAGGRRRVIVPANNPILSYFATDERAFMPAPFNFMQRYRYERLLSQMQ---PDGQFIFDVKLVKIFDNEADQGYFEDEILD 318
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_009032266.1 (hypothetical protein AURANDRAFT_16767, partial [Aureococcus anophagefferens] >EGB12602.1 hypothetical protein AURANDRAFT_16767, partial [Aureococcus anophagefferens]) HSP 1 Score: 103.6 bits (257), Expect = 8.400e-19 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 36 KSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLG 130 K+GL+Y D G GA+P+WGQV I+Y Y R KL D YLV+HGNGR IRGLDEG+HTMR+GG RR+ VPL +GYT GLG Sbjct: 14 KNGLKYVDGVAGAGAAPEWGQVLKIKYTAYTRDGA-GKLTKVDAV----PTYLVRHGNGRTIRGLDEGIHTMRVGGTRRVEVPLTMGYTAPGLG 102
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_005756873.1 (hypothetical protein EMIHUDRAFT_60569, partial [Emiliania huxleyi CCMP1516] >EOD04444.1 hypothetical protein EMIHUDRAFT_60569, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 97.8 bits (242), Expect = 4.600e-17 Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0 Query: 35 TKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGY 124 T SGLRY+D +G GA P++GQ+ Y GY L FD +Y R+TPY KHGNG ++GL+E LHTMR GG RR+++P +L Y Sbjct: 1 TASGLRYFDFAEGSGAPPRFGQLIRFHYVGYTATD--DSLEPFDSSYERRTPYFTKHGNGFTVQGLEEALHTMRPGGRRRVILPPKLSY 87
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_002179372.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49195.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.8 bits (242), Expect = 4.600e-17 Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 0 Query: 38 GLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLP 133 GL+Y D+ G+G +P++GQ+ I Y Y + P + + R Y+VKHGNGR+I GLDEGLH MR+GG RRI+VP +LGY +GLGP+P Sbjct: 1 GLKYLDLVVGDGPTPRYGQLLSIAYTAYGKL-PAAARNNQPQQFDRDDGYVVKHGNGRIIPGLDEGLHGMRVGGTRRILVPPKLGYVDSGLGPMP 94
BLAST of NO01G03920 vs. NCBI_GenBank
Match: WP_096624258.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Calothrix sp. NIES-3974] >BAZ07291.1 FKBP-type peptidylprolyl isomerase [Calothrix sp. NIES-3974]) HSP 1 Score: 95.9 bits (237), Expect = 1.800e-16 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 0 Query: 35 TKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNA 136 T SGL+Y D++ G GA+PK GQ ++ Y G + FD + R P+ G G+VI+G DEG+ TM++GG R++V+P +LGY + G+GP+PPNA Sbjct: 69 TPSGLKYTDLKVGSGATPKTGQTVVVHYTGTLPDG-----TKFDSSRDRNQPFEFAIGTGQVIKGWDEGVGTMQVGGRRQLVIPPQLGYGEAGVGPIPPNA 164
BLAST of NO01G03920 vs. NCBI_GenBank
Match: OEU22249.1 (hypothetical protein FRACYDRAFT_155129, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 94.7 bits (234), Expect = 3.900e-16 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 0 Query: 38 GLRYYDVRKGEGAS---PKWGQVAIIQYEGYIRASPFSKLVLFDDT---YARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLP 133 GL+Y ++ +G G S P++GQV +I Y GY++ DDT +A ++ +++KHG+GR+I GLDEGLHTM+ GG RR+++P +LG+ GLGP+P Sbjct: 1 GLKYIELEEGIGDSSKTPRYGQVCVISYTGYLQLPK-------DDTKKKFASQSGFILKHGSGRLIAGLDEGLHTMKQGGQRRLLIPPKLGFVLNGLGPIP 94
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_005762243.1 (hypothetical protein EMIHUDRAFT_216423 [Emiliania huxleyi CCMP1516] >EOD09814.1 hypothetical protein EMIHUDRAFT_216423 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 94.4 bits (233), Expect = 5.100e-16 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 0 Query: 3 ISFSSPSPFQPPSAFAATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRR 115 ++ + PS +P A A P V +KT SGLRY+D +G GA P++GQ+ Y GY L FD +Y R+TPY KHGNG ++GL+E LHTMR GG RR Sbjct: 28 LAAAGPSALRPAGASA----------PQVGYKTASGLRYFDFAEGSGAPPRFGQLIRFHYVGYTATD--DSLEPFDSSYERRTPYFTKHGNGFTVQGLEEALHTMRPGGRRR 127
BLAST of NO01G03920 vs. NCBI_GenBank
Match: WP_011432059.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Synechococcus sp. JA-2-3B'a(2-13)] >ABD01391.1 peptidyl-prolyl cis-trans isomerase, FKBP-type [Synechococcus sp. JA-2-3B'a(2-13)]) HSP 1 Score: 93.6 bits (231), Expect = 8.700e-16 Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0 Query: 35 TKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGL-GPLPPNA 136 T+SGL+YYD+ +G G SP+ GQ ++ Y G ++ +FD +Y R P++ +G G+VIRG +EGL TMR+GG R + +P EL Y G G +PPNA Sbjct: 46 TESGLQYYDIAQGSGPSPQPGQTVVVNYVGKLQDG-----TIFDSSYKRNQPFVFTYGVGQVIRGWEEGLATMRVGGKRYLRIPPELAYGSRGAGGVIPPNA 142
BLAST of NO01G03920 vs. NCBI_GenBank
Match: WP_015227426.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Halothece sp. PCC 7418] >AFZ45554.1 Peptidylprolyl isomerase [Halothece sp. PCC 7418]) HSP 1 Score: 93.2 bits (230), Expect = 1.100e-15 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0 Query: 35 TKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGL-GPLPPNA 136 T+SGLRY D+ +G+GA+PK GQ ++ Y G + FD + R P+ K G G+VI+G +EG+ TM++GG R++++P ELGY + G G +PPNA Sbjct: 62 TESGLRYVDIEEGDGATPKEGQTVVVHYTGSLADG-----TKFDSSRDRDRPFSFKLGEGQVIKGWEEGISTMQVGGRRQLIIPPELGYGQRGAGGVIPPNA 158 The following BLAST results are available for this feature:
BLAST of NO01G03920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03920 ID=NO01G03920|Name=NO01G03920|organism=Nannochloropsis oceanica|type=gene|length=699bpback to top protein sequence of NO01G03920.1 >NO01G03920.1-protein ID=NO01G03920.1-protein|Name=NO01G03920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
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