NO01G03450, NO01G03450 (gene) Nannochloropsis oceanica

Overview
NameNO01G03450
Unique NameNO01G03450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3429
Alignment locationchr1:899507..902935 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane transporter protein, chloroquine resistant
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:899507..902935 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013936CRT-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO01G03450 vs. NCBI_GenBank
Match: EWM29290.1 (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 730.7 bits (1885), Expect = 3.200e-207
Identity = 386/474 (81.43%), Postives = 423/474 (89.24%), Query Frame = 0
Query:   52 ETAVKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGGVPLKSIPQQFTLGFQCFRGINTLPGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSAWDDFVDRH-KQRKRLPMQFSAGSVMYMRERADSDPSTPGYTPLRVEPPKRRGSIDLQVNRSATNEGGSNGNGFGSRLLTPSKAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXINVVGEVVGTVSI 525
            ETA KKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVL+AA VV+HKR+R+GAHWWHKQDLPL+VLCFMGFLDATGSILSTMGGAYTAGAVQ LLNQVIIPMTLALSF+ LGQRFTGAQTLGALTIFIGAGIA+VPSF+  K   A    S   +GPPT+T+TGVLLFFSSILPGAFSNVYKEWGFAQ+HVDLYYLTT VSAIQVL GF FLPALQ+P FGG+PL+ IPQQFTLGF+CFRGINTLPGDDCKDA+ TMW+YVL+NFLFNVLQLLITKHGGATLLVISAALALPVTNFAF M WIMGEDTEPFNP+DAVAL VVL+GFLLYSAWDD VDR  KQRKRLP+QF+AGSVMY+RERADSDPSTPGYTP+RVEPP+RRGSID+Q+NR+   +G + G    +RLL PSKA+P XXXXXXXXXXXXXXXX          I++V + VGTVS+
Sbjct:   50 ETAAKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLLAALVVLHKRVRYGAHWWHKQDLPLSVLCFMGFLDATGSILSTMGGAYTAGAVQTLLNQVIIPMTLALSFLCLGQRFTGAQTLGALTIFIGAGIAIVPSFLAGKGARA---GSXXXEGPPTTTLTGVLLFFSSILPGAFSNVYKEWGFAQFHVDLYYLTTFVSAIQVLFGFAFLPALQVPIFGGMPLREIPQQFTLGFKCFRGINTLPGDDCKDAFLTMWMYVLINFLFNVLQLLITKHGGATLLVISAALALPVTNFAFSMTWIMGEDTEPFNPFDAVALAVVLVGFLLYSAWDDLVDRRKKQRKRLPIQFAAGSVMYLRERADSDPSTPGYTPIRVEPPRRRGSIDVQLNRAPHPDGTNKGISASTRLLAPSKAVPIXXXXXXXXXXXXXXXXLAPGRPSSYQIDIVSDEVGTVSL 520          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_004352099.1 (transmembrane protein [Acanthamoeba castellanii str. Neff] >ELR22960.1 transmembrane protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 194.1 bits (492), Expect = 1.100e-45
Identity = 121/345 (35.07%), Postives = 179/345 (51.88%), Query Frame = 0
Query:   56 KKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGGVPLKSIPQQFTLGFQCFRGINTLPGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA 401
            K T + +++ +Y F       AN+V  +     +  N+ +F NQF    Y ++A  +  +K           +  P+      G  D     L ++G   T   +Q ++NQ IIPMT+  SFI L  R+   +  GA  I  GA +A++P F          TS+   D PP +    +L++ S+ +P A SNV KE  F Q  +D+YY+ + V+  Q+ +    LP   LP FGG+    IP Q   G+ C  G NTLPGD C+  +    +YVLVNF +N+  LL+TKH  ATL  ++ AL LP+T   + + +IM + TE FN    V+LVVVLLGF +YSA
Sbjct:   43 KLTPETLRILLYFFLLVLFGIANSVTGRYNQMKFGSNYAWFNNQFTTLTYCVLAQIITSYKYFFTNDITDEMKAFPVWKFFLFGVFDGLAGFLFSIGAPNTPATLQNIINQTIIPMTMVASFIVLRARYGLGKIGGAGIILAGAFVALIPLF----------TSNKNSDNPP-ALWYAILIYVSNNVPQALSNVTKELAFGQVVLDVYYMGSWVAWFQLGVSLSLLPVTMLPGFGGISASDIPDQIQNGYFCLLGWNTLPGDSCEYNYLFTGMYVLVNFGYNIFILLVTKHASATLFTLAFALRLPLTQVVYTLHFIMFQFTEDFNWETIVSLVVVLLGFAIYSA 376          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_005536066.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM79780.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 185.7 bits (470), Expect = 3.800e-43
Identity = 116/358 (32.40%), Postives = 187/358 (52.23%), Query Frame = 0
Query:   64 LAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL----------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSAWDD 404
            L +Y  A  F +  NAV+FK+M N   PN+ +F +Q   ++Y+ +   V++ KR+         ++LP   L F+G L+A   I + +GG YT G  Q++L Q  IPMT+  S   LG R+   Q + A  I  GA + + P  +     ++ STS+  VD      +   L+F ++ LP + ++VYKE+      + ++ +   ++  Q L+G   +P   L  FG   VPL  +P     G +C  G + L                P D C+ AW  + +Y++ N L+NV  +L+ KHGGATL  +   L LP+ +FAFCM + MG++ +P + YD V LVV+L+G  +Y  W++
Sbjct:   22 LGVYASALLFFSVWNAVFFKRMTNT-MPNYPYFLSQVTSWIYLPVLGLVLLFKRVFDRPSPLEDEELPQLKLAFVGLLEAIAGICTVLGGVYTRGTTQMILVQASIPMTMFWSACILGTRYVVHQFVAAGVIIGGALVVLTPRLI--GIHSSGSTSTGTVD-----LLFFNLVFLAAQLPQSLAHVYKEYALRGQEMSVFIVMFYIAWYQSLIGLSLIPVNSLRLFGPARVPLHDLPSLLLNGIKCLLGQDVLRTDCIIERGDDGTSLPPCDHCRGAWLPVLLYMIANILYNVFGILVIKHGGATLYTMLMTLRLPLVSFAFCMSFFMGDEAQPVDWYDLVGLVVILIGLCIY-RWEE 370          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_004341623.1 (transmembrane protein [Acanthamoeba castellanii str. Neff] >ELR19537.1 transmembrane protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 181.8 bits (460), Expect = 5.500e-42
Identity = 118/352 (33.52%), Postives = 179/352 (50.85%), Query Frame = 0
Query:   64 LAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIF------------LGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGGVPLKSIPQQFTLGFQC-FRGINTLPG----DDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLY 399
            L +   A      AN V+FKKML     N+ +F +Q +  +Y+ +   VV    L         +  PL     MG LDAT  +L   GG  T+GA+Q LL Q +IP T+  S++             L  R+     LGA  I  G  +A++ +F+               +G   +TV G+++FF S  P AFS VYKE  F    +D+YY+   V   Q L+G +FLP   +P FGG+    IP     G +C F G N++      DDC+ AW+    Y++ N  +N++ LL+ K+G A LL +++A+ LP+ N AF + +IMG++    +PYD   LVV+L+G ++Y
Sbjct:   76 LLLLTAALILVGTANRVFFKKML-IPMVNYPYFISQLSTTVYIPIFWPVVWALMLFTSRITPEMRQFPLWKFLVMGALDATAGVLMIFGGNQTSGAMQQLLIQGVIPFTMFFSWLVSNPLVARILREKLNVRYRWGHYLGAFVIIAGIVVALLHAFLGS-------------NGAAGNTVFGIIVFFLSATPTAFSGVYKEIAFKGADLDIYYVNAWVCVFQFLVGLLFLPITAIPGFGGLTFSEIPDNLEDGARCLFTGHNSITTGKNVDDCEWAWTMTLGYIIANIAYNIVILLMLKYGSAALLYVASAVVLPLANIAFTLDFIMGKEATTLSPYDIAGLVVILIGLVIY 413          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: EWM25227.1 (Transmembrane transporter protein, chloroquine resistant [Nannochloropsis gaditana])

HSP 1 Score: 177.2 bits (448), Expect = 1.400e-40
Identity = 127/352 (36.08%), Postives = 177/352 (50.28%), Query Frame = 0
Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPT-STVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG---GVPLKSIPQQFTLGFQCFRGINTLPGDDCKDAWSTMWIYVL----VNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLY 399
            V K    + LA+ V  +    + NA+ +K M   Y  +  FF +     LY++    ++  + L   +     + LP      MGFLD  G+ L+ MG  YT G+VQ LLNQ +IP T+ +S  FL   F+  Q  GA  + +GA + V+P+F+     TA+S S++     P+ S     L+FF+S LP A S VYKE  F +  VD+ YLT  VS  Q   G    P   LP  G   GVPL SIP  F   + CF      P   C   W    + +L    VN +FN   L ++KHG A L VI+ A+ LPVT   F +  +MG  TEP +    + L++VLLGF LY
Sbjct:   35 VAKCPSILSLALLVVLT--LGSCNALVYKIMYQVYGSDGAFFVSTGVNVLYIIYGGLLLYPRMLFTDSITPAMKALPKRRFIIMGFLDCCGTFLAAMGAVYTPGSVQTLLNQTLIPTTMIVSACFLRTHFSNVQLAGAALVLMGAAVTVLPAFI-----TAESDSNNGHGASPSQSRWYANLVFFASNLPVACSQVYKERAFKRDSVDVLYLTQWVSVFQFFFGLALAPLQALPGIGSAHGVPLSSIPTAFLESWDCFL---EKPTSVCHGQWPAPSLLLLAFCAVNLVFNTGGLYVSKHGSAVLNVITYAVLLPVTTLIFSLRPLMGAFTEPLSASTVLGLLLVLLGFYLY 376          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: CEM02178.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 165.6 bits (418), Expect = 4.100e-37
Identity = 111/347 (31.99%), Postives = 170/347 (48.99%), Query Frame = 0
Query:   64 LAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGGVPLK--SIPQQFTLGFQCFRGINTL----------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLY 399
            LA Y      ++  N+V+FKKM N   PN+ +F  Q    +YV +  ++V++  +R G      +  P      MG  D+   I   +GG  T+G  Q++L Q  IP+TL  + + L  R+   Q +G+  I  G  I+ +PSFM           ++   G P       LLFF + +P A S+VYKE  F    +D+  L   V+A Q+L+GF+ +P   LP  G   ++   IP  F  G +C  GINT+          P D C  AW     Y+L N  +NV  +L+ KHG A +  + A L LP+T+ AF   ++MG D       D + L+V+++G + Y
Sbjct:   76 LAAYSLGLLLSSVCNSVFFKKMTNG-MPNYGWFLTQLTTVIYVPIFLSLVIYTDMR-GGITPEMKSFPRRRFAVMGAFDSLAGICMVLGGVNTSGTTQVILQQATIPVTLLATVLALSIRYHWMQYMGSTVIIAGVLISKLPSFM-----------AAPDPGAPKDQFFFNLLFFLASVPTALSSVYKEVAFRDVDLDVNLLQYWVAAFQLLIGFLLVPINTLPMLGEQRIEWVQIPAAFANGAKCLVGINTITEQCGGLHQPPCDACATAWIPTASYLLANVFYNVFTILVIKHGSAAISFLIATLRLPLTSMAFYSSFVMGADAMQPRATDFLGLLVIIVGLVGY 409          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_013439903.1 (Drug/Metabolite Transporter (DMT) Superfamily putat, related [Eimeria necatrix] >CDJ62541.1 Drug/Metabolite Transporter (DMT) Superfamily putat, related [Eimeria necatrix])

HSP 1 Score: 165.2 bits (417), Expect = 5.300e-37
Identity = 112/362 (30.94%), Postives = 178/362 (49.17%), Query Frame = 0
Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHK----RLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFM-PRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL-----------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLY 399
            +K   + +K+ +Y      ++  N + FK+ML+   PN+  F NQ   F+++ + AA  +++    +L            P      MG LD    I+S +GG +T+G  Q++L+Q+ IP+ L L    LG+++   Q LGA  I  G  +   P  + P K    DS++    +          LLF  SILP + S V KE  F    ++  +L   V+  Q  +GFV LP   LP  G  GVPL  +  +   G +C  G +T+           P D C+ AW  ++IYVL N ++NV  +L+ KH GAT+L +   + LP+T+ AF  P I+G+   P    D   L+++L+G L +
Sbjct:  222 IKTNERQLKVLLYTAGLLVSSTGNTIAFKRMLDK-MPNYSGFLNQLTNFVFIPVFAAFCLYQYSVGKLSQARAGGEVLSFPKKNFALMGCLDGVCGIMSVVGGVHTSGTAQVVLSQLGIPVMLILCRFMLGKKYNAIQHLGAAVIIFGVLVVESPGLLHPSK---EDSSNIPFFN----------LLFLLSILPSSLSYVVKEIAFRGVQMNTSFLQFWVALFQFFVGFVLLPLTSLPLLGKEGVPLGELWDRLLDGGKCLIGTDTIVPPDCGFLTGVPCDSCQGAWIEVFIYVLFNLIYNVCSMLVLKHCGATVLFLVMTVRLPLTSMAFYSPLIVGDSAVPAKATDFFGLLILLVGLLAF 569          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_642710.1 (hypothetical protein DDB_G0277321 [Dictyostelium discoideum AX4] >Q550A6.1 RecName: Full=Crt homolog 2; AltName: Full=Chloroquine resistance transporter paralog 2; Short=DdCRTp2 >EAL68847.1 hypothetical protein DDB_G0277321 [Dictyostelium discoideum AX4])

HSP 1 Score: 164.9 bits (416), Expect = 7.000e-37
Identity = 121/366 (33.06%), Postives = 177/366 (48.36%), Query Frame = 0
Query:   58 TSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFS-----SILPGAFSNVYKEWGFAQYH-VDLYYLTTSVSAIQVLLGFVFLPALQ-LPAFGGVPLKSIPQQFTLGFQCFRGINT----------------------LPGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLG 395
            + +   + +YV     +   N++  KK++N +  N+ FF NQ   + YV +  A+V++K L         +  P      MG LDA       +GG  T G +Q LLNQ +IP T+ LSFIFL +R++  Q  GAL I  G  ++++PS       T  +TS             G +LF++     S++P AFSNVYK  GF+    +D++YL    +  Q L+G V  P    LP    +    +  Q   G +C  GINT                      L  D+C  AW  + IY+ VN L+NV  LL+ KH GAT+  I+  L LP+TN AF   +IMG D+ PF+      L ++LLG
Sbjct:   54 SKQTATVLVYVVLYILSGVINSLLLKKVMNVF-TNYGFFLNQLTNYGYVPIFGAIVLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFTMLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSL------TGGNTS-------------GNMLFYNFFYLISMIPYAFSNVYKAIGFSTVEDMDVWYLQYFDALYQSLVGTVLFPINNWLPPPSDMKFNQVIPQLKAGGKCLGGINTLIEQYNSTTGELLPTSCNYGDNLGCDNCHGAWVVVLIYMAVNVLYNVFILLVLKHAGATVFSIANTLRLPLTNIAFSFKFIMGSDSNPFSGLSVAGLCIILLG 399          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: KYQ90502.1 (putative transmembrane protein [Tieghemostelium lacteum])

HSP 1 Score: 164.5 bits (415), Expect = 9.100e-37
Identity = 122/377 (32.36%), Postives = 180/377 (47.75%), Query Frame = 0
Query:   64 LAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQY-HVDLYYLTTSVSAIQVLLGFVFLPA-LQLPAFGGVPLKSIPQQFTLGFQCFRG-----------------INTLPGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSAWDDFVDRHKQRKRLPMQFSAG 422
            + IYV         N+V  K ++N ++ N+ FF NQ   + Y+ +  +VV +K           ++ PL     MG LDA       +GG  T+G +Q LLNQ IIP T+  SFIFL +RF+  Q LGAL I  G  I++VPS           T S    G   + V   + +  SI+P A SNVYK+ GF     +D+++L       Q L+G +  P    LP    VP KS+      G  C  G                  + L  D+C +AW  +  Y+ +N ++N+  LL+ KH GAT+  I+  L LP+TN  F + +IM ++T PF+P     L+V+L+G   Y A     +R  Q     ++F  G
Sbjct:   42 ILIYVVLYITCGVINSVLLKSVMNTFQ-NYGFFLNQLTNYGYIPIFGSVVAYKVFFTNDIPKETKEFPLYKFAVMGALDALCGYFVVLGGISTSGPLQQLLNQAIIPFTMITSFIFLKERFSIYQMLGALVIVGGVVISLVPSL----------TGS----GNTGNKVFWNMFYLFSIVPYAASNVYKDIGFKSVDDMDVWWLQFWDGVFQSLIGTLLFPVNAILPPPATVPFKSVIPSLKNGTICLTGHDIWTQANSDCTLTQEANSNLVCDECTNAWVILLCYMTINVIYNIFILLVIKHAGATVFSIANTLRLPLTNIVFSLKFIMHKNTSPFSPLSVAGLIVILIGLGGYRAASILKNRRAQAGGAQIKFIPG 403          
BLAST of NO01G03450 vs. NCBI_GenBank
Match: XP_008883526.1 (transmembrane protein [Hammondia hammondi] >KEP65980.1 transmembrane protein [Hammondia hammondi])

HSP 1 Score: 163.7 bits (413), Expect = 1.500e-36
Identity = 116/396 (29.29%), Postives = 177/396 (44.70%), Query Frame = 0
Query:   55 VKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQFNVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILSTMGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAGIAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVYKEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFG--GVPLKSIPQQFTLGFQCFRGINTL------------PGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGATLLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSAWDDFVDRHKQRKRLPMQFSAGSVMYMRERADSDPST 437
            + + +  V++A Y F    T+  N + FKKM++   PN+     Q    ++V +  A+  +     G       + P      MGFLD+   +++ +G  +T G  Q++L Q  I  +L  S I L +RF  A  LGAL I +G  +  +P  +   +   D                  LL+  S LP A S VYKE  F    +   YL   V+  Q L+GF+ LP   LP  G   VPL  +P     G +C  G NT+            P D+C+ AW  + +Y+  N L+N+  + + K GGA L  + + L LPVT  AFC   IMG+   P    D   L+V++LG ++Y A      R ++R     +    S M +  R +    T
Sbjct:  345 IDRNAATVRVACYTFLLLVTSTGNTICFKKMIDK-MPNYSPCLTQVTTIVFVPVFFALSFYTDYAEGLP-QEMAEFPKRNFAVMGFLDSFSGVMAIIGAVHTTGTTQVVLQQSCIVFSLLASIIMLRKRFHAAHYLGALVIILGVLVVKLPDLLHPSSDGGD------------DVFVFNLLYLLSNLPTAVSCVYKEVAFRGVEMGTNYLQAWVALFQFLIGFLVLPLNALPVLGPQRVPLAELPASLWNGTRCLFGFNTIVTNCGGTGNMESPCDNCEGAWKYVGMYLSFNLLYNMFVIFVVKSGGAALTFLVSTLRLPVTALAFCSRTIMGDRAVPPRATDFYGLLVLILGLVIYRAGSIMKRRAQRRAVAAARGHTSSPMLLTPREEDQIGT 726          
The following BLAST results are available for this feature:
BLAST of NO01G03450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29290.13.200e-20781.43Transmembrane transporter protein, chloroquine res... [more]
XP_004352099.11.100e-4535.07transmembrane protein [Acanthamoeba castellanii st... [more]
XP_005536066.13.800e-4332.40hypothetical protein, conserved [Cyanidioschyzon m... [more]
XP_004341623.15.500e-4233.52transmembrane protein [Acanthamoeba castellanii st... [more]
EWM25227.11.400e-4036.08Transmembrane transporter protein, chloroquine res... [more]
CEM02178.14.100e-3731.99unnamed protein product [Vitrella brassicaformis C... [more]
XP_013439903.15.300e-3730.94Drug/Metabolite Transporter (DMT) Superfamily puta... [more]
XP_642710.17.000e-3733.06hypothetical protein DDB_G0277321 [Dictyostelium d... [more]
KYQ90502.19.100e-3732.36putative transmembrane protein [Tieghemostelium la... [more]
XP_008883526.11.500e-3629.29transmembrane protein [Hammondia hammondi] >KEP659... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007971NSK007971Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03450.1NO01G03450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668396gene_347Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g27gene1350Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03450.1NO01G03450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03450 ID=NO01G03450|Name=NO01G03450|organism=Nannochloropsis oceanica|type=gene|length=3429bp
TCTCCAAATTTTCGTTCCCCCCACAACCTTGCAACCGGCGCATCGGTCGT
AGCCTTGGCAACAAGGTTATGAGGCACAGGAGGGTGAAATTATTTCCGTC
AAACCTTTGTTGGTTTCATAGATTGCTTTACAATTCGTTGTTGTGACAAA
TGGGAAGAGGTAGGACTCCATTTCCACAGTCCATAAGACCTCAGCGCCCT
GGTCATTGGGTTCGATGTTTTGAACGGTACAGTGTCGGACTGCTTCGGCA
CGCGCCACAAAAAGCCTTCCTCTCAAATAAAAAAAGTCAAGTTGACCTCT
TGCCTCAAAGTGTCCCCCTCCCCCCTCCAACAATGATAATAGAAGGGCAC
GCATCCTTGAATCATTTTTTTAAATTGAATTTTCAGGCATTAACATGCGG
GGTCGGCGTCGGCCGACGGGGAAAAAAACAACGTTGAAGATGTGATGTAC
ACCATACCCAGTGTTCCACTGGTGGTGCTCAACCCAGCAGGCCTAGCCTA
CGTACCACAAAAACAACTCATAATCAACGCTTACAGACGCCACGGAACAT
TTTCAACACAAGGGGCATGATGGACATCCAAATCGAGCGGTGCGAGCGCT
TTTAGCATCATCCGTCGCCCTCGCGGCACACCATCTTCCACACGAAATGC
GCCCAGTGGCCAAGGGCTGCATGGCCTATTAGGAGAAGACCACGATAATG
GCATCGCAGCATTTGTCCTGACTGCTCTTTTTGGCTGACGGCACCATCTA
TTGAGGATGGCCAATACTGCCTGCTGCGCGCCGCTGCAATCCCCACAGGC
GGTGATAACCCTCCGATAGATGGCCCCCCACAGGAGACCAGCCCCGCGGA
ATGAGAAGCAAGAGTTCCACAGGCCTTTTAGACCACGGTGGACTATTTAT
GCCTGGTACTGGGCGCAAGCAATGGGCATGGCAGACCCCACCGTATTTAA
TTATAAATCTTCTCTCTCTCATCTATGCGTTGAAAGCAGCCCTTGTGTCT
TTTGCTTCGTGTAGAGCAAGATTTGAGTACAGTCGATATAGGTGGCAATA
ATTATGAACAAAACGCTTGCTTTCCTGTTGATCTCGAAAATGTGCCCACG
CTCCAATCCCAACATGCTCCACACACTCACTCAGTTGTTGGTAACTGTAT
TCCTGTCCACCATCCCACACCCCTTCCGTCATATATCCCCTTTATATCCC
CTTTACGTCCAACACACAGTACCGCAGCGGAAAATAGGACTATACTCGTT
TTGTGTCGTACACCCAGCACGTCATGGTGGATGAAGGAACGCCTCTGCGG
CTTTCGGTCTCGACGTCAACAACAACCGCCTCTAGCAGTAATACACCCGG
TGGTGGTGGAACGACCCCAACCCGTCGGCCCTCCTTTCTGACCAGTAAGC
CTCCACCCTCCCGCCCCGAGGAACCCGAGACGGCGGTCAAGAAAACGAGC
AAGGCGGTCAAGTTGGCTATATATGTCTTTGgtaggttttcaattttctt
caattcgtctctcgttcctgccgcttgcttctagcaacctcaacttttag
caccacgacccgacatatatcacgagctcggccgtttcggcataattaga
tctcttgttcatgaacctctcatcttgttttcggtctcattcattttcat
ctcactcttcttttctcctccacgctaaacacagCCTCGACATTCACCGC
GGCCGCTAACGCCGTCTGGTTCAAAAAAATGCTCAACGCCTATCGACCCA
ATTTCGAGTTTTTCGGGAACCAATTTAATGTCTTCCTCTACGTCCTCATG
GCCGCTGCCGTCGTTGTGCACAAGCGCCTCCGACACGGCGCACACTGGTG
GCACAAGCAAGACCTTCCCCTGAACGTGCTGTGTTTTATGGGTTTTCTAG
ACGCGACTGGTTCCATTCTGTCGACGATGGGCGGCGCCTACACAGCTGGG
GCGGTACAGATACTACTGAATCAAGTAATCATCCCCATGACGCTTGCCCT
ATCGTTCATTTTCCTTGGGCAACGCTTCACGGGCGCACAAACCCTTGGAG
CGCTCACCATTTTCATCGGCGCCGGCATCGCGGTTGTCCCTTCGTTTATG
CCCAGAAAGGCCAGGACTGCGGACAGCACTAGCAGCAGTGTTGTTGATGG
CCCTCCGACAAGCACGGTTACGGGAGTCTTGTTGTTTTTTTCTAGTATCT
TGCCCGGGGCCTTTTCCAACGTGTACAAAGAGTGGGGCTTCGCTCAATAC
CACGTTGACCTCTACTATCTCACCACCAGCGTCTCGGCTATCCAGGTGCT
TCTGGGTTTTGTGTTCTTGCCCGCTTTGCAGCTGCCGGCGTTTGGAGGAG
TGCCGTTGAAAAGCATACCACAGCAATTCACATTGGGGTTTCAATGTTTC
CGGGGGATAAACACCCTCCCCGGTGATGACTGCAAAGACGCCTGGAGCAC
CATGTGGATTTACGTCTTGGTCAATTTCCTGTTTAATGTGCTGCAGCTTT
TGATTACCAAGCATGGTGGGGCCACCTTGTTGGTGATCTCGGCGGCCTTG
GCGTTACCAGTGACTAACTTTGCGTTTTGCATGCCTTGGATTATGGGAGA
GGATACAGAACCTTTCAACCCTTATGATGCTGTCGCTCTTGTTGTGGTCC
TCCTCGGCTTCCTCTTATACAGCGCCTGGGATGATTTCGTGGACCGTCAC
AAACAGCGCAAGAGGCTGCCCATGCAATTTTCTGCTGGCTCGGTCATGTA
CATGCGGGAAAGGGCTGACTCGGATCCTTCTACACCTGGCTATACGCCTC
TTCGCGTTGAGCCACCCAAGCGTCGAGGTAGCATTGATTTACAAGTCAAT
CGATCGGCGACCAATGAGGGTGGGAGCAACGGGAATGGATTTGGGTCTCG
CTTATTGACGCCATCTAAAGCGATCCCGATTCTCTTGCAGCAGCAGCAGC
AGCGACGGCGGGGGGAGGCGCAGGGAGGGGTGGGAGTTGGGGGAGGCTAC
TCGTATCAAATAAATGTGGTGGGAGAGGTGGTTGGGACTGTAAGTATATA
GAAGACGAGAGACGAGGTAGAGCATGAGAAACGATGAGCGGTGGGAGGGA
GAGTAAAGTAGTTGATGGAAGAGAAAGAAACGTTGAATCCAAATTTTTGT
GAAATAAGAGATGACAGAGTGTGAGGATTTGTGTTTTCGTCCTCTTTAAA
TAAAGGCCGGGGATATTGTAGCGGCCCTCATCGCTCCCACAAAACAGATG
GCTTTTCATGTAAATAATGAAACTGAGTGAATGTAGTGAGAGTATGAGTG
AAAAAAGAGAAGGTAGGATGAGGAGAAGAAGGATCCAATACCGGTCTAAC
AGAGCCAAAGCAGCCTCGAGAATGAAATTTATAGTAAGAAGAGACCAATT
AAGAAAGAATGGATAACGAATTTAAAGCA
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protein sequence of NO01G03450.1

>NO01G03450.1-protein ID=NO01G03450.1-protein|Name=NO01G03450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MVDEGTPLRLSVSTSTTTASSSNTPGGGGTTPTRRPSFLTSKPPPSRPEE
PETAVKKTSKAVKLAIYVFASTFTAAANAVWFKKMLNAYRPNFEFFGNQF
NVFLYVLMAAAVVVHKRLRHGAHWWHKQDLPLNVLCFMGFLDATGSILST
MGGAYTAGAVQILLNQVIIPMTLALSFIFLGQRFTGAQTLGALTIFIGAG
IAVVPSFMPRKARTADSTSSSVVDGPPTSTVTGVLLFFSSILPGAFSNVY
KEWGFAQYHVDLYYLTTSVSAIQVLLGFVFLPALQLPAFGGVPLKSIPQQ
FTLGFQCFRGINTLPGDDCKDAWSTMWIYVLVNFLFNVLQLLITKHGGAT
LLVISAALALPVTNFAFCMPWIMGEDTEPFNPYDAVALVVVLLGFLLYSA
WDDFVDRHKQRKRLPMQFSAGSVMYMRERADSDPSTPGYTPLRVEPPKRR
GSIDLQVNRSATNEGGSNGNGFGSRLLTPSKAIPILLQQQQQRRRGEAQG
GVGVGGGYSYQINVVGEVVGTVSI*
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Synonyms
Publications