NO01G03280, NO01G03280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_031226167.1 (HAD family hydrolase [Alcanivorax sp. P2S70]) HSP 1 Score: 104.4 bits (259), Expect = 1.100e-18 Identity = 80/227 (35.24%), Postives = 122/227 (53.74%), Query Frame = 0 Query: 139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYP-AMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALN--VLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVE 363 +++++FDLD+TLW VI A A ++ N+P A A + A+ L K+ P E+L++ T LR+ A++ + G E + +A AAFQ +H+AR+ V FFPGALE+L+ L V L A+TNGN D+ I +F F +AE +G RK +AAA++ AGV + VHVGD ED+ AA+ + + T+W + + VE Sbjct: 4 LKLITFDLDNTLWPVDEVIRQAEKACSLWIAENHPDAAAALSAERVRAVRTSLLKEKP-EYLDN---------LTALRQDAMSRAFVEHGFGKDEARRIALAAFQVFHEARNRVS--FFPGALEVLEQLADSYV-LGALTNGNADLRMI-GIHDLFAFHHSAETIGRRKPAPDMFAAALRSAGVS---ASQAVHVGDHPLEDVHAAR-EHGMHTVWANLVDMDWPVE 212
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_018718433.1 (hypothetical protein [Arhodomonas aquaeolei]) HSP 1 Score: 104.0 bits (258), Expect = 1.500e-18 Identity = 75/206 (36.41%), Postives = 104/206 (50.49%), Query Frame = 0 Query: 139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQP-AISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCG--LPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAA 342 V V+FDLD TLW VI +A A+L NYPA+ A P A+ AL + P E D + +R+ A + G E + + E F + DARHD+ + F A+ +L++L+ RGVRL A+TNGN DI ++ G F+F + A VGA K + + AA AGV G VHVGDD D++ A Sbjct: 9 VTAVTFDLDYTLWDLAGVIEHAEEVAYAYLDANYPAVTAALSPEAVLALRSEVVADRP-EIAHD---------VSAMRREAFRRAGTRAGYSAAEVETLVEDTFHVFVDARHDI--VLFDDAVPVLEWLRARGVRLGALTNGNADIRRL-RMDGYFDFALAAVDVGAAKPSHLVFEAARGHAGVS---MGEIVHVGDDPHSDVIGA 198
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_102791583.1 (HAD family hydrolase [Alcanivorax sp. MD8A] >PNE02807.1 hydrolase [Alcanivorax sp. MD8A]) HSP 1 Score: 104.0 bits (258), Expect = 1.500e-18 Identity = 80/227 (35.24%), Postives = 122/227 (53.74%), Query Frame = 0 Query: 139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYP-AMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALN--VLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVE 363 +++++FDLD+TLW VI A A ++ N+P A A + A+ L K+ P E+L++ T LR+ A++ + G E + +A AAFQ +H+AR+ V FFPGALE+L+ L V L A+TNGN D+ I +F F +AE +G RK +AAA++ AGV + VHVGD ED+ AA+ + + T+W + + VE Sbjct: 4 LKLITFDLDNTLWPVDEVIRQAEKACSLWIAENHPDAAAALSAERVRAVRTSLLKEKP-EYLDN---------LTALRQDAMSRAFVEHGFGKNEARRIALAAFQVFHEARNRVS--FFPGALEVLEQLADSYV-LGALTNGNADLRMI-GIHDLFAFHHSAETIGKRKPAPDMFAAALRSAGVS---ASQAVHVGDHPLEDVHAAR-EHGMHTVWANLVDMDWPVE 212
BLAST of NO01G03280 vs. NCBI_GenBank
Match: CBN76118.1 (haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 102.8 bits (255), Expect = 3.300e-18 Identity = 51/122 (41.80%), Postives = 69/122 (56.56%), Query Frame = 0 Query: 195 PDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKR 317 P + +++PD + V T LRK L + G+ +P V E+ F+ W ARHDV+ FPG L+ L+ LK RGVRL A+TNGN D I K +FEFC+ AE+V R G +KR Sbjct: 16 PSQLVKNPDLDPAPVNLTGLRKAGLARACELTGVADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVRHLLRLGSARLCGLKR 137
BLAST of NO01G03280 vs. NCBI_GenBank
Match: XP_009528246.1 (hypothetical protein PHYSODRAFT_509813 [Phytophthora sojae] >EGZ14497.1 hypothetical protein PHYSODRAFT_509813 [Phytophthora sojae]) HSP 1 Score: 101.3 bits (251), Expect = 9.600e-18 Identity = 81/241 (33.61%), Postives = 112/241 (46.47%), Query Frame = 0 Query: 131 TPSPEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQP-AISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGL--------PEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLK----------GRGVRLCAVTNGNCDIDQIAA-FKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIW 352 T SP G V V+FDLDDTLWCG+TVI A+ A AFL P + A+ P A AL+ + P + + +T LRK L + CG + +A E AF+A+ + R + F G LL+ L+ G L +TNGNC +D + F+ F I+AE VG+ K + + AAV + + VHVGD + D+ AK LRTIW Sbjct: 4 TESPAGAAVRGVTFDLDDTLWCGRTVIRKASEAFHAFLAQQTPQLAAQFPPAAFDALLVEFQRALPAQAHD----------YTFLRKHTLRHCVKACGAQNLRVQDQAQLEAFVETAFRAFLEPRSRPE--LFDGVEGLLRGLELEIKRSSGAVAAGPVLGVITNGNCAMDSLPKYFQDHVNFMISAELVGSAKPSAAIFDAAVAKFPASYSRQ-HLVHVGDHYECDVEGAKR-AGLRTIW 230
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_011629726.1 (haloacid dehalogenase [Alkalilimnicola ehrlichii] >ABI57332.1 HAD-superfamily hydrolase, subfamily IA, variant 1 [Alkalilimnicola ehrlichii MLHE-1]) HSP 1 Score: 101.3 bits (251), Expect = 9.600e-18 Identity = 68/209 (32.54%), Postives = 109/209 (52.15%), Query Frame = 0 Query: 134 PEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAE-GQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAA 342 PE G + V+FDLD TLW + VI A +Q FL YP + + A+ L +A++HP+ + + +R+ +L +A CG E + EAAF + + RH+V + + L L+ R R+ A+TNGN D++++A + F+F ++A +VGA K + + AA RAG+ G VHVGD+ D++ A Sbjct: 2 PESGAIRAVTFDLDFTLWDLEHVIQRAEQRMQRFLAARYPRVSEHFDEEAMRRLRLRMAEEHPE----------LRINVSAMRRASLRRIALTCGYGED--MVEAAFHVFMEGRHEV--VPYDDVAPTLTALR-RHYRIGALTNGNADVNRLALGE-YFDFSVSAVEVGAAKPSRIIFEAACHRAGI---APGEMVHVGDEVHSDVLGA 191
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_097088122.1 (HAD family hydrolase [Pseudomonas sp. URIL14HWK12:I9] >SNZ17674.1 putative hydrolase of the HAD superfamily [Pseudomonas sp. URIL14HWK12:I9]) HSP 1 Score: 100.9 bits (250), Expect = 1.200e-17 Identity = 74/217 (34.10%), Postives = 107/217 (49.31%), Query Frame = 0 Query: 139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLAL--NVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYH 354 +E+V+FDLDDTLW VI NA L+ +L + P + A A+ A+ L P + R ++LR+ L +L E + +A +AF+ + ARH VD FFP L+ L R RL A+TNGN D+ ++ F F + AE VG K P+ A++RAG VHVGD+ +DI A+ LR +WY+ Sbjct: 3 IELVTFDLDDTLWDTAPVIENAERVLRQWLAEHAPRIGAFPPEALFAIRQRLVSAEP----------SLKHRISELRRRVLFHGLLEAGYLQAEAETLAHSAFETFLHARHQVD--FFPEVYPTLEQLANR-YRLAALTNGNADVRRLGV-ADYFSFALCAEDVGVGKPDPAPFEEALRRAGTH---ACHAVHVGDNPCDDIAGAQ-QAGLRAVWYN 201
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_008439351.1 (MULTISPECIES: haloacid dehalogenase [Pseudomonas] >EJF67558.1 putative hydrolase [Pseudomonas sp. Ag1]) HSP 1 Score: 100.5 bits (249), Expect = 1.600e-17 Identity = 69/227 (30.40%), Postives = 114/227 (50.22%), Query Frame = 0 Query: 139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQA--VAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVEK 364 +++++FDLDDTLW VI +A +++ +L T+ + ++L + ++HP+ R + LR L ++ G P P+A +A+ F+A+ ARH + FP A +LQ L+ R L +TNGN D+ ++ F F + AE +G K R + A++R GV G VHVGD +DI A+ LR +W++ A + + EK Sbjct: 3 IKLITFDLDDTLWDNVPVIISAEASMREWLATHATKVGDLPLEKFASLRQQVLERHPE----------LKYRISVLRHKVLQYAFEEAGYPLPEAAQMADVCFEAFIHARHQLTV--FPEAEPMLQALR-RDYLLGVITNGNADVQRV-GLADYFHFALRAEDIGIAKPDARLFQEALQRGGVAPGAA---VHVGDHPGDDIAGAQ-QAGLRAVWFNPAGKAWEAEK 211
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_080531654.1 (HAD family hydrolase [Alcanivorax xenomutans] >ARB47329.1 HAD family hydrolase [Alcanivorax xenomutans]) HSP 1 Score: 100.1 bits (248), Expect = 2.100e-17 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 138 GVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFL-EDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQA--VAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAK 343 G+++++FDLD+TLW VI A A A++ ++P A +AL + D + E PD N++ R LR+ A+ + G E +A +A+ AF +H+AR+ V FFPGALE+L+ L L A++NGN D++QI + +F F +AE +G RK + AA+ AGV + VHVGD ED+ AA+ Sbjct: 3 GLKLITFDLDNTLWPVDEVIRQAERACSAWIAEHHP-------EASAALTAERIRSVRDRLIGEQPDYLNNLTR---LRRDAMAQAFIEAGFAEREARHIAQDAFLVFHEARNKVS--FFPGALEVLETL-ADSYTLGALSNGNADLEQI-GIRDLFAFHHSAESIGKRKPEADMFHAALHSAGVS---ATQAVHVGDHPLEDVDAAR 193
BLAST of NO01G03280 vs. NCBI_GenBank
Match: WP_102370151.1 (HAD family hydrolase [Pseudomonas sp. NC02] >AUO26286.1 HAD family hydrolase [Pseudomonas sp. NC02]) HSP 1 Score: 100.1 bits (248), Expect = 2.100e-17 Identity = 69/227 (30.40%), Postives = 113/227 (49.78%), Query Frame = 0 Query: 139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQA--VAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVEK 364 +++++FDLDDTLW VI +A +++ +L T+ + +L + ++HP+ R + LR L ++ G P P+A +A+ F+A+ ARH + FP A +LQ L+ R L +TNGN D+ ++ F F + AE +G K R + A++R GV G VHVGD +DI A+ LR +W++ A + + EK Sbjct: 3 IKLITFDLDDTLWDNVPVIISAEASMREWLATHATKVGDLPLEKFGSLRQQVLERHPE----------LKYRISVLRHKVLQYAFEEAGYPLPEAAQMADVCFEAFIHARHQLTV--FPEAEPMLQALR-RDYLLGVITNGNADVQRV-GLADYFHFALRAEDIGIAKPDARLFQEALQRGGVAPGAA---VHVGDHPGDDIAGAQ-QAGLRAVWFNPAGKAWEAEK 211 The following BLAST results are available for this feature:
BLAST of NO01G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03280 ID=NO01G03280|Name=NO01G03280|organism=Nannochloropsis oceanica|type=gene|length=2687bpback to top protein sequence of NO01G03280.1 >NO01G03280.1-protein ID=NO01G03280.1-protein|Name=NO01G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bpback to top Synonyms
Publications
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