NO01G03280, NO01G03280 (gene) Nannochloropsis oceanica

Overview
NameNO01G03280
Unique NameNO01G03280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2687
Alignment locationchr1:860551..863237 -

Link to JBrowse

Properties
Property NameValue
DescriptionHydrolase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:860551..863237 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO01G03280 vs. NCBI_GenBank
Match: EWM29263.1 (hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 535.0 bits (1377), Expect = 2.600e-148
Identity = 292/533 (54.78%), Postives = 353/533 (66.23%), Query Frame = 0
Query:   41 MTRCT--LSLAAHFLTLASTTTAFVKPP--LSPPPLAILHATEPKRDIFTASIFEDKASDPLRQDGYWEELFMKGSSGAVPSEASRVSLFNESTTPSPEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFK-------------------------------------GIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVEKEXXXXXXXXXXXXXXXXXEGPLISTHEIKGLAPGLSRLANMATASADRFFKDKGAVHVRSMETDDYLTHYIVKEFADAEVETLKEVGVVIEEWLSQGCRNGGEEDHVTESGEIAEAAGSGLGLDA-EGKEEGGEKLGRRGVEGTKFCIACRAVLPARAKFCSTCGEAQE 532
            MTR    L L A F+ L  +  AF++PP   S  P A LH+ EP RD++T S+FE+ + DPL Q+ YWE+LFM+GS+    S ++      E T P  E  GV+VVSFDLDDTLWCGKTVISNAN ALQAFLQ NYPAMV++  P +SALMW+LAKKHP+EFLEDP+D  S+VRFTDLRKLAL  LA+KC +PEPQAVAEAAFQAWHDARHDV  LFFPGAL+LLQ LK RG+RLCA+TNGNCDI +IAAF+                                     G+FEFCINAEKVGARKRTGRPY AA+++AGVGEGV  RWVH+GDDF+EDI+AAK D KLRTIWYHTAERKAKVE+E                 +    S  +       LS LA+    S + FFKDK AVHV +METDDYLTH+I KEF D EVE LKE+  +I+ W+ QG +   ++  V  +G  ++ +     ++A + KEE            +KFCIACRA+LP RAKFCS CGE QE
Sbjct:    1 MTRSAPCLPLFAFFVLLVPSVAAFLRPPRSRSTRPRA-LHSREPARDLYTTSLFENPSEDPLLQEKYWEDLFMQGSAARGESPST------EGTGPE-EAVGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMETDDYLTHFITKEFVDGEVEDLKEIVPLIDNWVRQGKQRPPKKKAVGGTGSTSDTSSGVDCIEAPQDKEE------------SKFCIACRAILPVRAKFCSACGEKQE 513          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: CEM09997.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 164.5 bits (415), Expect = 9.200e-37
Identity = 106/287 (36.93%), Postives = 148/287 (51.57%), Query Frame = 0
Query:   68 SPPPLAILHATEPKRDIFTASIFEDKASDPLRQDGYWEELFMKGSSGAVPSEASRVSLFNESTTPSPEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAM---VAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIW 352
            +PPP A+  AT  +R         D++   +R+     ++F   +  AVPS          S+  +     VEV++FDLDDTLW    V+ +A + L+A+L   YP M   +++   +I  LM  + ++       DP   N +   T LRK AL   A K G  EP+ + + AFQ W DARHDV      G LE L  L+  G R+ A+TNGN   ++I      F+FCINAE VGA K + + Y AA++ AG       RWVHVGDD + D+V AK     RTIW
Sbjct:   40 APPPSAVREATLLRRR------QRDRSRSGVRRHAL-ADVFRSLAGPAVPS---------SSSASNDAAQRVEVITFDLDDTLWTANPVLDSAKDRLEAYLDREYPRMGRWLSQSYGSIDDLMRAIYRRKQK---RDPRLANVVTYLTRLRKEALKEAAVKTGY-EPKLLVDQAFQVWSDARHDVLEFLPDGTLETLSSLRSTGYRIGAITNGNARTERIEVLSEYFDFCINAEDVGASKPSKKVYEAAMRVAGYMRSPGDRWVHVGDDLSADVVPAKQQ-SWRTIW 305          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: XP_002181676.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46890.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 151.4 bits (381), Expect = 8.100e-33
Identity = 139/466 (29.83%), Postives = 197/466 (42.27%), Query Frame = 0
Query:   96 DPLRQDGYWEELFMKGSSGAVPSEASRVSLFNESTTPSPEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFLE-DPDDCNSIVRFTDLRKLAL-NVLAQKCGLPEPQA--VAEAAFQAWHDARHDVDALFFPGALE-------LLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEG--------------VEGR----WVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVEKEXXXXXXXXXXXXXXXXXEGPLISTHEIKGLAPGLSRLANMATASADRFFKDKGAVHVRSME--TDDYLTHYIVKEFADAEVETLKEVGVVIEEWLSQGCRNGGEEDHVTESGEIAEAAGSGLGLDAEGKEEGGEKLGRRGVEGTKFCIACRAVLPARAKFCSTCGEAQ 531
            DPL+    WE ++ +G + A P +   +    +S+        V VVSFDLD+TLW     IS AN AL AFL       V + Q  I  +M +L K++ + +   + +   +    T LRK A+  +L    G     A   AE AFQ W +ARHD        A++        +Q   G  V + A+T+GN D   I      F FC+NAEKVG  K   R Y  AV+                     +E R    WVHVGDDF +D+VAAK DL +R++W        +V+                               L+ G          S +   KD     V  M+    DYL + + +EFADA V+   EV  V+  W S+G         + E+ ++       L  + E  +   ++       G+KFC+ CR  LP  AKFCS CGE Q
Sbjct:    9 DPLK----WERMYQEGGN-AAPFKLEGMMNLQQSSE-------VRVVSFDLDNTLWVTSATISAANEALAAFLDAR---GVVQPQ-RIETIMGILFKENKERYCPIEVEQAKAPALLTLLRKDAIRKILLDDNGYSSESAECSAEEAFQTWTNARHDAITFNMAEAVKECLQEIAAIQTSDGHSVVIGAITDGNSDPRLIDELSKYFHFCVNAEKVGISKPDKRIYLKAVQELAGHPSLKHLLPDDDAQDYELESRLGPWWVHVGDDFIKDVVAAK-DLNMRSVWARELVLNKQVD-----------------------------YALSEG------KPERSVEALVKDVSKNEVVKMQVGATDYLVNSLHQEFADAIVDRFGEVATVLNAWHSEGLVKTSTPLQIVEN-DVTVQEEVVLRPEVESGDTENDRTPNIKNGGSKFCLFCRNTLPGAAKFCSECGEGQ 421          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: GAX12259.1 (hypothetical protein FisN_1Hh190 [Fistulifera solaris])

HSP 1 Score: 141.0 bits (354), Expect = 1.100e-29
Identity = 126/435 (28.97%), Postives = 185/435 (42.53%), Query Frame = 0
Query:  139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQP-AISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLAL-NVLAQKCG--LPEPQAVAEAAFQAWHDARHDV-------DALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRA--------------------GVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIW-----YHTAERKAKVEKEXXXXXXXXXXXXXXXXXEGPLISTHEIKGLAPGLSRLANMATASADRFFKDKGAVHVRSME--TDDYLTHYIVKEFADAEVETLKEVGVVIEEW-----LSQGCRNGGEEDHVTESGEIAEAAGSGLGLDAEGKEEGGEKLGRRGVEGTKFCIACRAVLPARAKFCSTCGEAQ 531
            V VVSFDLD+TLW     I  AN+AL +FL +         QP  +  +M  L +K+   +    +   + V  T LRK A+ NVL +  G    E  A++E AF+ W  ARHD         A      +  +Q   G  + + A+T+GN D  ++ A    F+FCINAE VG  K   R Y  A+++                      + E V   WVHVGDDFT+D+VA K  L +RT+W         +++  V++E                                           S +   K    + V  ME    DYL+  + KEFAD+ +++  ++  V++EW      S       E+       ++ +++   L L+A     G E         TKFCI C   LP+ AKFCS CG+AQ
Sbjct:   24 VRVVSFDLDNTLWNTSATIDAANDALASFLDSRKIV-----QPIRVEKVMGELFQKNKSRYCPLDERAKAPVYLTLLRKDAIRNVLVEANGYSTEEATALSEEAFELWVQARHDAILNNMARSAANCLKEISSMQRKDGHRIIIGAITDGNSDPQRVEALAPFFDFCINAESVGVGKPDKRVYLEAIRQVASMPSMQDIFGNSPRTLPVDSLEEKVGPFWVHVGDDFTKDVVAGK-GLNMRTVWCRELILDNLKQQNLVDEEIP--------------------------------------PERSVEDLVKQVSDMKVVKMEIGAGDYLSDMLQKEFADSVIDSFIDLSSVLKEWHTTETPSASSSLPAEDAQQVSPLQLEKSSSRALALEATEPVNGDE---------TKFCIFCGTKLPSVAKFCSGCGQAQ 405          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: GAX21134.1 (hypothetical protein FisN_1Lh190 [Fistulifera solaris])

HSP 1 Score: 136.7 bits (343), Expect = 2.100e-28
Identity = 124/435 (28.51%), Postives = 184/435 (42.30%), Query Frame = 0
Query:  139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQP-AISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLAL-NVLAQKCGLPEPQA--VAEAAFQAWHDARHD-------VDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRA--------------------GVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIW-----YHTAERKAKVEKEXXXXXXXXXXXXXXXXXEGPLISTHEIKGLAPGLSRLANMATASADRFFKDKGAVHVRSME--TDDYLTHYIVKEFADAEVETLKEVGVVIEEW-----LSQGCRNGGEEDHVTESGEIAEAAGSGLGLDAEGKEEGGEKLGRRGVEGTKFCIACRAVLPARAKFCSTCGEAQ 531
            V VVSFDLD+TLW     I  AN+AL +FL +         QP  +  +M  L +K+   +        + V  T LRK A+ N+L +  G    +A  ++E AF+ W  ARHD       V A+     +  +Q   G  + + A+T+GN D  ++ A    F+FCINAE VG  K   R Y  A+++                      + E V   WVHVGDDFT+D+VA K  L +RT+W       + +++  V KE                                           S +   K    + V  ME    DYL+  + KEFAD+ +++  ++  V++EW              E+       ++ +A+   + L+      G E         TKFCI C   LP+ AKFCS CG+AQ
Sbjct:   15 VRVVSFDLDNTLWNTSATIDAANDALASFLDSRKIV-----QPIRVEKVMGELFQKNKSRYCPLDQRAKTPVYLTLLRKDAIRNILEEANGYCTEKATSLSEEAFELWVQARHDAILNNMAVSAVHCLKEISSMQRKDGHRIIIGAITDGNSDPKRVQALAPFFDFCINAESVGVGKPDKRVYLEAIRQVASMPSMQDIFGNSPGTLPVDSLEEKVGPFWVHVGDDFTKDVVAGK-GLNMRTVWCRELILDSLKQQTVVNKEIP--------------------------------------PERSVEDLVKQVSEMKVVKMEIGAGDYLSDMLQKEFADSVIDSFIDLSSVLKEWHAIEPTPASSLLPAEDSQQVPPLQVEKASLRTITLEVVEPVNGDE---------TKFCIFCGTKLPSVAKFCSGCGQAQ 396          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: GBG34477.1 (S1-like domain-containing protein C146.08c [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 114.0 bits (284), Expect = 1.400e-21
Identity = 80/241 (33.20%), Postives = 121/241 (50.21%), Query Frame = 0
Query:  133 SPEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDE-----FLEDPD-DCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAF---KGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVEKE 365
            S +   ++V+SFDLDDT++    V++ A      FL+ N+P                LAK  P E     F E  D    +    T +RK AL   A+     +P+ V E AF+A+ DAR+DV    FPG LE L+ LK +G ++ ++TNGNCD+  + AF   + +FE  + AE  GA K    P+   ++  GV    E   +H+GD+   D+  A+    +RT+W +  E    V+KE
Sbjct:  230 SADARPIKVLSFDLDDTIFECAPVLTRAAQVQHEFLEENFPE---------------LAKAVPLEHFKTLFREALDTHAENAHNLTFIRKQALRRAAEMTE-HDPEEVVEPAFRAFIDARNDVGKHIFPGVLEALRRLKEKGYQIVSLTNGNCDVTTVQAFMEPEAVFEHSVTAESAGAAKPEAAPFQKIMELTGVSHPSE--VLHIGDNLNSDVAGAR-AFGMRTLWVNRQE----VDKE 447          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: OEU20927.1 (hypothetical protein FRACYDRAFT_179801, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 107.1 bits (266), Expect = 1.700e-19
Identity = 107/383 (27.94%), Postives = 155/383 (40.47%), Query Frame = 0
Query:  134 PEGGGVEVVSFDLDDTLWCGKTVISNANNALQAFLQTN-----YPAMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLAL-NVLAQKCGLPEPQAV--AEAAFQAWHDARHD--VDALFFPGALELLQFLK------GRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRA----------------------GVGEGVEG-RWVHVGDDFTEDIVAAKHDLKLRTIWYHTAER-----KAKVEKEXXXXXXXXXXXXXXXXXEGPLISTHEIKGLAPGLSRLANMATASADRFFKDKGAVHVRSMETDDYLTHYIVKEFADAEVETLKEVGVVIEEWLSQGCRNGGEEDHVTE 473
            P G  V VV+FDLD+TLW     IS AN+AL  +L  +      P  V E    I   ++   ++     ++    C S V  T LR   +  VL  + G    +A+  AE AF  W  ARH   +D L  P  +E L  ++         V + AVT+GN D  +I A    F+FC+NAE VG  K   R Y  A++RA                         EG+ G  W+H+GDDF +DIVAAK ++K+RTI+     R         EK+                     +S+  +  L  G S                            DYL   +  EF DA      ++  ++E+W ++   +   E +V E
Sbjct:   15 PIGSHVRVVTFDLDNTLWKTSETISAANDALAIYLSKSDDGDGNPIKVPERIEKIMGELFRADRRKYCPLVK--QRCKSPVLLTQLRTDTICYVLETENGFSTERALSFAERAFDEWTQARHGAILDHL-APRVVETLDKIRTTISYNNIPVLMGAVTDGNSDPSRIEALAPYFDFCVNAESVGVSKPDSRVYLEAIRRAVKVSQSKNNNKNGYFNIDDIDDETLEGIIGPYWIHIGDDFLKDIVAAK-EMKMRTIFAVGLVRDKLLDNTNTEKDDSNKKDAKMDMAEFLQKVSSQVSSQNVLTLEIGAS----------------------------DYLAKSLHGEFVDAVAHEFFDISTILEDWHAEAITSREREKNVIE 365          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: XP_005826043.1 (hypothetical protein GUITHDRAFT_114938 [Guillardia theta CCMP2712] >EKX39063.1 hypothetical protein GUITHDRAFT_114938 [Guillardia theta CCMP2712])

HSP 1 Score: 105.9 bits (263), Expect = 3.900e-19
Identity = 72/243 (29.63%), Postives = 124/243 (51.03%), Query Frame = 0
Query:  141 VVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLL--AKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGL--PEPQAVAEAAFQAWHDARHDV-DALFFPGALELLQFLKGR--GVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGA---RKRTGRPYAAAVKRA-----------GVGEGVE--GRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAK 361
            V+SFDLDDTLW    V+ +AN A++++L  NYP     G P  +A+  ++   ++   +  E+       + +T++R  AL +  +  G    E +A ++ AF  W   R+   + L FPGA+  LQ +K     V   A+TNG  ++ ++ + + +F+F ++AE+      RK + R +  AV RA            +   V    RW+HVGDD   DI+ A   + +RT+W   A+ +++
Sbjct:  106 VISFDLDDTLWPTVDVVMSANRAMESWLNLNYP-----GTPNATAIQGIMKAERERARKECEELGVEEKPMSYTEMRITALRLATEAAGYSRDEAEAASKNAFDVWLQERNAAGERLLFPGAVSALQEIKSMYPDVLFGAITNGRANVTEMGSLRSLFDFSVSAEEPEVFPDRKPSTRIFWEAVTRAEKRLKDRSRRKDIDSLVPHLSRWIHVGDDLVNDILPA-GQIGMRTVWIEGAQDRSQ 342          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: OQX30393.1 (hypothetical protein B0D94_11520 [Gammaproteobacteria bacterium LUC14_002_19_P1] >OQX38413.1 hypothetical protein B0D89_12750 [Gammaproteobacteria bacterium LUC13015_P5] >OQX38495.1 hypothetical protein B0D96_00125 [Gammaproteobacteria bacterium LUC13013_P4] >OQX45329.1 hypothetical protein B0D88_00605 [Gammaproteobacteria bacterium LUC13017_P7] >PUD99934.1 haloacid dehalogenase [Gammaproteobacteria bacterium N3_P5] >PUE01142.1 haloacid dehalogenase [Gammaproteobacteria bacterium N1_N3_P5] >PUE04512.1 haloacid dehalogenase [Gammaproteobacteria bacterium N1_P5])

HSP 1 Score: 105.1 bits (261), Expect = 6.600e-19
Identity = 78/220 (35.45%), Postives = 111/220 (50.45%), Query Frame = 0
Query:  139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYPAMVA-EGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAER 358
            +  +SFDLDDTLW  + V+  A  +L  +L  +YP + A +G  A+ A    LA+  P E   D          T LRK  L  LAQ+ G   P  + E AF  + +ARH V    +   L  LQ L+  G  L A+TNGN  I ++   + +F+F +NA +  A K   R +  A +RAGV        +HVGDD   DI+ A H+  +RT W + + R
Sbjct:   10 IRAISFDLDDTLWDNRPVLLAAEQSLFDWLSAHYPRICARQGSDALRAGRLALARARP-ELAHD---------MTALRKAWLGELAQRHGY--PMRLVEEAFAVFIEARHRV--RLYDEVLPALQGLREAGFLLGALTNGNASIRRLGLDR-LFDFDVNAAQAKATKPDPRVFRIACERAGV---APWEMLHVGDDPATDILGA-HNAGVRTAWVNRSAR 210          
BLAST of NO01G03280 vs. NCBI_GenBank
Match: ERP91779.1 (HAD family hydrolase [Alcanivorax sp. P2S70])

HSP 1 Score: 104.4 bits (259), Expect = 1.100e-18
Identity = 80/227 (35.24%), Postives = 122/227 (53.74%), Query Frame = 0
Query:  139 VEVVSFDLDDTLWCGKTVISNANNALQAFLQTNYP-AMVAEGQPAISALMWLLAKKHPDEFLEDPDDCNSIVRFTDLRKLALN--VLAQKCGLPEPQAVAEAAFQAWHDARHDVDALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKVGARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTIWYHTAERKAKVE 363
            +++++FDLD+TLW    VI  A  A   ++  N+P A  A     + A+   L K+ P E+L++          T LR+ A++   +    G  E + +A AAFQ +H+AR+ V   FFPGALE+L+ L    V L A+TNGN D+  I     +F F  +AE +G RK     +AAA++ AGV      + VHVGD   ED+ AA+ +  + T+W +  +    VE
Sbjct:    7 LKLITFDLDNTLWPVDEVIRQAEKACSLWIAENHPDAAAALSAERVRAVRTSLLKEKP-EYLDN---------LTALRQDAMSRAFVEHGFGKDEARRIALAAFQVFHEARNRVS--FFPGALEVLEQLADSYV-LGALTNGNADLRMI-GIHDLFAFHHSAETIGRRKPAPDMFAAALRSAGVS---ASQAVHVGDHPLEDVHAAR-EHGMHTVWANLVDMDWPVE 215          
The following BLAST results are available for this feature:
BLAST of NO01G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29263.12.600e-14854.78hydrolase [Nannochloropsis gaditana][more]
CEM09997.19.200e-3736.93unnamed protein product [Vitrella brassicaformis C... [more]
XP_002181676.18.100e-3329.83predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX12259.11.100e-2928.97hypothetical protein FisN_1Hh190 [Fistulifera sola... [more]
GAX21134.12.100e-2828.51hypothetical protein FisN_1Lh190 [Fistulifera sola... [more]
GBG34477.11.400e-2133.20S1-like domain-containing protein C146.08c [Aurant... [more]
OEU20927.11.700e-1927.94hypothetical protein FRACYDRAFT_179801, partial [F... [more]
XP_005826043.13.900e-1929.63hypothetical protein GUITHDRAFT_114938 [Guillardia... [more]
OQX30393.16.600e-1935.45hypothetical protein B0D94_11520 [Gammaproteobacte... [more]
ERP91779.11.100e-1835.24HAD family hydrolase [Alcanivorax sp. P2S70][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007992NSK007992Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03280.1NO01G03280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576989gene_328Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g9gene1367Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03280.1NO01G03280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03280 ID=NO01G03280|Name=NO01G03280|organism=Nannochloropsis oceanica|type=gene|length=2687bp
CTGCCCTGCTGCTAATGGCCCTGTGATAATATGTACGGGGATGGGGTACT
CTAGGGGTGAGCCTGGCCGGCTGGCTGGCTGACTGCGGTACAACGATCTC
TGAGGCATGCAACATTTCTACGGCGGTAGCTGACTAGAATGTAGAGCGGC
ACCTCTGAGTGCAGATTGCGCGGTTGAGGCGGGGCGTTAAATTTGAAGTG
TGAAAGAGGCAAGGAACAAGGCCCATGCCCCAGCAGTCACTGTTGCTAAC
TGCGGATGATGCCAAGGGACAGTCAGCACACCCGATATCCTTACACCCCA
CTGTCCTCCCTAAGCACGCAAATTACATTATGTATTCTCCATTCGCACAC
AGGCAGTGAGGAGGGCCACATATCGATGACCCGGTGCACCCTTTCTCTTG
CCGCGCATTTCCTAACTCTTGCCTCGACCACAACTGCATTTGTCAAACCT
CCCCTCTCCCCTCCTCCCCTCGCCATACTGCACGCCACTGAGCCCAAGCG
GGACATCTTCACCGCCTCAATATTTGAGGATAAGGCTTCAGATCCGTTGC
GACAAGACGGGTATTGGGAAGAGTTGTTCATGAAGGGCAGCAGCGGCGCG
GTCCCCTCAGAGGCCTCTCGCGTTTCGCTCTTCAATGAGAGCACGACGCC
ATCCCCCGAGGGGGGGGGCGTGGAGGTGGTGAGCTTCGACCTGGACGACA
CCTTGTGGTGTGGTAAGACGGTAATTAGCAATGCTAACAAgtacgtttgg
ggatgggttggtacgtgtggcgagttttctcgagatgggagacgccacct
cctcctactcctatccgccacaaatccattccattccacgcgcaaattga
agagatgtgcgcttttttttttgccacatccgtaatcggtcatctaatac
acaccacactctggccccctcacatcatttgccaaaatagTGCCTTGCAA
GCCTTCCTCCAAACCAACTACCCAGCCATGGTGGCCGAGGGTCAACCCGC
CATTTCGGCACTTATGTGGCTCCTGGCGAAAAAGCATCCAGATGAATTTT
TAGAGGACCCCGATGATTGCAATTCCATCGTTCGTTTCACTGACTTGAGG
AAGCTCGCTCTCAATGTGTTAGCGCAAAAATGTGGTTTGCCCGAGCCCCA
AGCAGTGGCAGAAGCGGCTTTTCAGGCGTGGCATGACGCGAGgtaaagaa
ggagtgatagaggaaagaaaagaggaagagagggagatctgcatgaacga
ttagttcttttgacaacgtttccctctcattccctgcgacttatgccaca
gACATGACGTGGACGCGTTGTTTTTCCCGGGTGCCTTGGAGTTGCTGCAG
TTTCTGAAGGGACGGGGGGTGAGATTGTGTGCAGTCACGAATGGGAATTG
CGACATCGACCAGATTGCTGCCTTTAAAGgtacacagtgttactgctcct
accgctgctgctgccgctgctctttttatgcagaatctgtaaacctttac
ttctctcttttctgcatcactggtgctctgtggtctcagtggctggaatc
tcgcttgtcgtctgtatgagggcgttctccgcctcctttcttctagtctt
cttctaccctttcttctccacccacgcatacctttatgccctcacgcccc
ccatttcctcacccacacagGCATATTCGAATTCTGCATTAATGCCGAAA
AAGTTGGTGCTCGGAAAAGGACCGGCCGCCCGTACGCCGCCGCCGTCAAG
CGGGCAGGGGTCGGGGAAGGAGTGGAGGGACGATGGGTGCATGTCGGCGA
TGATTTTACGGAAGATATTGTGgtagggagggaaggaaggaaggaaggag
ggagggagggagggaggatgtttttcttgggcagcataggtggtggatcc
ttccggcttcatttcaatggtcgcttacgcaaatcccacctacccgtcct
cctcctcatcctctcttcagGCGGCGAAACATGATTTGAAATTGCGAACG
ATTTGGTATCACACGGCGGAGCGCAAGGCAAAGGTAGAGAAGGAGCAGGC
GGAGGCACAGAACGAACGAGCAAAGAAGCAGGGACAGCGCGAGAAAGAGG
GCCCTCTTATTTCCACACATGAAATAAAGGGATTGGCTCCTGGATTATCT
CGTTTGGCTAATATGGCCACGGCTTCGGCGGATCGATTTTTCAAGGATAA
AGGTGCGGTGCATGTCAGGAGCATGGAGACAGATGATTATTTGACACATT
ATATTGTGAAGGAATTTGCAGATGCGGAGGTAGAGACATTAAAAGAGGTG
GGGGTGGTGATTGAGGAGTGGTTGTCGCAAGGATGTCGAAATGGAGGGGA
AGAAGACCATGTAACGGAATCGGGAGAAATAGCCGAAGCGGCCGGTTCAG
GTTTAGGTCTTGATGCGGAGGGGAAGGAGGAGGGAGGGGAGAAACTCGGT
AGAAGAGGGGTGGAGGGCACTAAGTTTTGCATTGCGTGTCGGGCGGTGCT
GCCGGCGCGGGCAAAGTTCTGCTCGACGTGTGGGGAGGCACAAGAATGAG
TACATATGATGCGGTTGTGGAAGTACAATCCCTTTAAGGTAGAACAAGAA
AAAGGAGGAAGGAGAAAACTGAAGTGTAAAGAAAATTCAAAAAGGTGACG
CATGCACCTCTTCTTTTTGTGAAGGGTCGCAATTTGA
back to top

protein sequence of NO01G03280.1

>NO01G03280.1-protein ID=NO01G03280.1-protein|Name=NO01G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MMPRDSQHTRYPYTPLSSLSTQITLCILHSHTGSEEGHISMTRCTLSLAA
HFLTLASTTTAFVKPPLSPPPLAILHATEPKRDIFTASIFEDKASDPLRQ
DGYWEELFMKGSSGAVPSEASRVSLFNESTTPSPEGGGVEVVSFDLDDTL
WCGKTVISNANNALQAFLQTNYPAMVAEGQPAISALMWLLAKKHPDEFLE
DPDDCNSIVRFTDLRKLALNVLAQKCGLPEPQAVAEAAFQAWHDARHDVD
ALFFPGALELLQFLKGRGVRLCAVTNGNCDIDQIAAFKGIFEFCINAEKV
GARKRTGRPYAAAVKRAGVGEGVEGRWVHVGDDFTEDIVAAKHDLKLRTI
WYHTAERKAKVEKEQAEAQNERAKKQGQREKEGPLISTHEIKGLAPGLSR
LANMATASADRFFKDKGAVHVRSMETDDYLTHYIVKEFADAEVETLKEVG
VVIEEWLSQGCRNGGEEDHVTESGEIAEAAGSGLGLDAEGKEEGGEKLGR
RGVEGTKFCIACRAVLPARAKFCSTCGEAQE*
back to top
Synonyms
Publications