NO01G02610, NO01G02610 (gene) Nannochloropsis oceanica

Overview
NameNO01G02610
Unique NameNO01G02610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1242
Alignment locationchr1:675910..677151 -

Link to JBrowse

Properties
Property NameValue
DescriptionAmidases related to nicotinamidase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:675910..677151 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036380Isochorismatase-like_sf
Homology
BLAST of NO01G02610 vs. NCBI_GenBank
Match: EWM29168.1 (amidases related to nicotinamidase [Nannochloropsis gaditana])

HSP 1 Score: 372.9 bits (956), Expect = 8.600e-100
Identity = 173/261 (66.28%), Postives = 205/261 (78.54%), Query Frame = 0
Query:    5 GDSFTPFALLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVV 266
            G +  PFALLIIDPQ DFH+GGSLA+ GAD+DAQRI++F+E N+D ITNIYVTLDSHQ VHISHPLFWK     +P P+T I   DV+ GKW AADE LK Y E+Y  QLET +GKFQH +WPEHC+I + GHC+V PVL  IHAW+A TRKPI Y+WKG N  TEMYSVF+AEVPVPG  ETE+N+ LV++LVAEPRV+ICGQALSHCVNFS RDL+ AWP  R+ D+ LL GMSSPV GFE  A  F+  ++E G +VV
Sbjct:   26 GKATAPFALLIIDPQVDFHEGGSLAIAGADEDAQRIKSFIETNIDQITNIYVTLDSHQLVHISHPLFWKGPQKETPPPYTVISKEDVLCGKWSAADENLKHYVENYIKQLET-TGKFQHTIWPEHCVISTRGHCIVGPVLEGIHAWTAKTRKPIHYHWKGINALTEMYSVFQAEVPVPGSPETEMNDDLVKQLVAEPRVLICGQALSHCVNFSVRDLMLAWPRERIGDVGLLLGMSSPVQGFEDDAERFVAFMRESGAQVV 285          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: XP_012207236.1 (hypothetical protein SPRG_12081 [Saprolegnia parasitica CBS 223.65] >KDO22094.1 hypothetical protein SPRG_12081 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 264.6 bits (675), Expect = 3.300e-67
Identity = 128/261 (49.04%), Postives = 167/261 (63.98%), Query Frame = 0
Query:    3 DGGDSFTPFALLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVR 264
            D  D     AL IIDPQ DFH GGSLA+P A+DDA+R   F+  ++  IT + +TLDSHQR+HI+H +FWK+ +GASPAPFT I   DV  GKW      L+AYA +YT  LE + G+F   +WPEHC+IG+ G  +V  V  A   WS  +R+PI Y  KG+N  TE YS  +A+V +P   ET +N  L+  L     V +CGQALSHCVNF+ RDL+  WP GR  D+ +L   +SPV GFE   V+F+  + +RGVR
Sbjct:   14 DAKDGHGGLALFIIDPQVDFHPGGSLAIPTANDDAERTAAFIRKHMTAITQLVITLDSHQRLHIAHGVFWKNVDGASPAPFTLITSEDVANGKWSPRAPELQAYAYEYTKALE-AGGRFTLCIWPEHCIIGTKGQAIVDAVHTAALEWSRVSRRPITYVHKGSNCYTEHYSALRADVELPHDPETSLNVGLIDALKTAGVVAVCGQALSHCVNFTVRDLVEHWPAGRASDIAILTDCTSPVPGFEASGVDFVADMGKRGVR 273          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: OQS04318.1 (hypothetical protein THRCLA_03434, partial [Thraustotheca clavata])

HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66
Identity = 125/253 (49.41%), Postives = 165/253 (65.22%), Query Frame = 0
Query:   13 LLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVV 266
            L IIDPQ DFH GGSLA+P ADDDA R   F+  N+  I+ + +TLDSHQR+HI+H +FW +A G SP+PFT I   DV +GKW+     LKAYA +YT  LE + G+F   +WPEHC+IG+ G  +V P+  A   WS H  +PI Y  KG+N  TE YS  +A+V +P   ET +N  LV  L +   V++CGQALSHCVNF+ RDL+  WP+ R  D+ +L   SS V GFE  A +F+  + +RGV+ V
Sbjct:  262 LFIIDPQVDFHPGGSLAIPAADDDALRTATFIRSNMAKISQLVITLDSHQRLHIAHGVFWTNAAGESPSPFTLIPSADVASGKWVPRSSELKAYALEYTKALE-AGGRFTLCIWPEHCIIGTKGQAIVDPIHDAALEWSKHAGRPITYVHKGSNCFTEHYSALRADVELPHDPETSLNVGLVDTLKSSGNVVVCGQALSHCVNFTVRDLVDLWPQERNKDIIVLTDCSSSVPGFESSADDFIRDMSKRGVQFV 513          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: XP_008608949.1 (hypothetical protein SDRG_05032 [Saprolegnia diclina VS20] >EQC37429.1 hypothetical protein SDRG_05032 [Saprolegnia diclina VS20])

HSP 1 Score: 261.2 bits (666), Expect = 3.700e-66
Identity = 125/258 (48.45%), Postives = 164/258 (63.57%), Query Frame = 0
Query:    6 DSFTPFALLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVR 264
            D     AL IIDPQ DFH GGSLA+P A+DDA+R   F+  ++  IT + +TLDSHQR+HI+H +FWKD +G SPAPFT I   DV +GKW      L+AYA +YT  LE + G+F   +WPEHC+IG+ G  +V  V  A   WS  +R+PI Y  KG+N  TE YS  +A+V +P   ET +N  L+  L     V +CGQALSHCVNF+ RDL+  WP GR  D+ +L   +SPV GFE    +F+  + + GVR
Sbjct:   17 DGHGGLALFIIDPQVDFHPGGSLAIPTANDDAERTAVFIRKHMGAITQLVITLDSHQRLHIAHGVFWKDLDGVSPAPFTLITSADVASGKWSPRAPELQAYAYEYTKALE-AGGRFTLCIWPEHCIIGTKGQAIVDVVHDAALEWSRVSRRPITYVQKGSNCYTEHYSALRADVELPHDPETSLNVGLIDALKTAGVVAVCGQALSHCVNFTVRDLVQHWPAGRASDIAILTDCTSPVAGFESSGADFIADMSKLGVR 273          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: POM78585.1 (hypothetical protein PHPALM_3867 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 260.4 bits (664), Expect = 6.300e-66
Identity = 126/257 (49.03%), Postives = 165/257 (64.20%), Query Frame = 0
Query:   13 LLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVVAEVK 270
            LL+ID Q DFH GGSLA+P A++DA RI  F++ + + +  + +TLDSHQR HI+H +FW+D  G SP PFT I   DV  G W   D  LK Y   YT  LE +SGKF   +WPEHCL+GSPGH +VP VLAA   W+  + KP++Y  KG+N  TE YS  KAE  +P    T +N+ALV  L    +V++CG+A+SHCVN++ RDL+AAWP+ R  DL +L   SSPV GFE    EFL  +   G+ +    K
Sbjct:   21 LLVIDQQVDFHPGGSLAIPTANEDAARIATFIQKHANQLKQLVLTLDSHQRYHIAHGIFWEDTEGKSPEPFTLITAKDVADGVWRPRDSNLKEYVLAYTTTLE-ASGKFTLCIWPEHCLMGSPGHNIVPNVLAAAVEWTKVSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPSTSLNQALVDTLKLADKVIVCGEAISHCVNYTVRDLVAAWPKERRHDLVILTDCSSPVPGFEKAGEEFLRDMAAEGLTLTTSDK 276          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: POM70370.1 (hypothetical protein PHPALM_13203 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 259.6 bits (662), Expect = 1.100e-65
Identity = 126/257 (49.03%), Postives = 164/257 (63.81%), Query Frame = 0
Query:   13 LLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVVAEVK 270
            LL+ID Q DFH GGSLA+P A++DA RI  F++ + + +  + +TLDSHQR HI+H +FW+DA G SP PFT I   DV  G W   D  LK Y   YT  LE +SGKF   +WPEHCL+GSPGH +VP VLA    W+  + KP++Y  KG+N  TE YS  KAE  +P    T +N ALV  L    +V++CG+A+SHCVN++ RDL+AAWP+ R  DL +L   SSPV GFE    EFL  +   G+ +    K
Sbjct:   21 LLVIDQQVDFHPGGSLAIPTANEDAARIATFIQKHANQLKQLVLTLDSHQRYHIAHGIFWEDAEGKSPEPFTLITAKDVADGVWRPRDSNLKEYVLAYTTALE-ASGKFTLCIWPEHCLMGSPGHNIVPNVLATAVEWTKVSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPSTSLNHALVDTLKLADKVVVCGEAISHCVNYTVRDLVAAWPKERRHDLVILTDCSSPVPGFEKAGEEFLRDMAAEGLTLTTSDK 276          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: OWY94778.1 (hypothetical protein PHMEG_00035394 [Phytophthora megakarya])

HSP 1 Score: 257.7 bits (657), Expect = 4.100e-65
Identity = 125/257 (48.64%), Postives = 165/257 (64.20%), Query Frame = 0
Query:   13 LLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVVAEVK 270
            LL+ID Q DFH GGSLA+P A++DA+RI  F+  +   +  + +TLDSHQR HI+H +FW++  G SP PFT I   DV  G W   D +LK Y   YT  LE +SGKF   +WPEHCL+GSPGH +VP VLAA   W+  + KP++Y  KG+N  TE YS  KAE  +P    T +N+ALV  L    +V++CG+A+SHCVN++ RDL+AAWP+ R  DL +L   SSPV GFE    EFL  +   G+ +    K
Sbjct:   21 LLVIDQQVDFHPGGSLAIPTANEDAERIAAFIRTHASQLKQLVLTLDSHQRYHIAHGIFWENTEGQSPEPFTLITAQDVADGVWRPRDSSLKEYVFAYTTALE-ASGKFTLCIWPEHCLMGSPGHNIVPNVLAAAVEWTKVSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPTTSLNQALVDTLKLADKVVVCGEAISHCVNYTVRDLVAAWPKERRHDLVILTDCSSPVPGFEKAGEEFLRDMAAEGLTLTTSDK 276          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: ETP46572.1 (hypothetical protein F442_07190 [Phytophthora parasitica P10297])

HSP 1 Score: 256.9 bits (655), Expect = 6.900e-65
Identity = 125/258 (48.45%), Postives = 166/258 (64.34%), Query Frame = 0
Query:   12 ALLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVVAEVK 270
            A+L+ID Q  FH GGSLA+P A++DA RI  F+  +   ++ I +T+DSHQR HI+H +FW +  G SP PFT I   D+  G W   D +L  Y   YT  LE ++GKF   +WPEHCLIGSPGH +VP VLAA   W+  T KPI+Y  KG+N  TE YSV KAE  +P    T +N+ L++ L    +V+I G+ALSHCVN++ RDL+AAWP+ R+ DL +L   SSPV GFE  A +FL  +  RGV +    +
Sbjct:   59 AILVIDQQVSFHPGGSLAIPTANEDAARIAAFITNHTSELSQIILTMDSHQRYHIAHGIFWMNDAGESPQPFTTITSKDIKKGVWRPRDSSLSDYVLTYTKALE-ATGKFSLTIWPEHCLIGSPGHNIVPNVLAAAMEWTKRTLKPIQYVMKGSNPFTEHYSVLKAEYELPYDPSTSLNKKLIKSLQRANKVVIVGEALSHCVNYTIRDLVAAWPKKRLSDLFILTDCSSPVPGFEEPAKQFLRDMAARGVTLTTSTE 315          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: ETP46573.1 (hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 256.9 bits (655), Expect = 6.900e-65
Identity = 125/258 (48.45%), Postives = 166/258 (64.34%), Query Frame = 0
Query:   12 ALLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVVAEVK 270
            A+L+ID Q  FH GGSLA+P A++DA RI  F+  +   ++ I +T+DSHQR HI+H +FW +  G SP PFT I   D+  G W   D +L  Y   YT  LE ++GKF   +WPEHCLIGSPGH +VP VLAA   W+  T KPI+Y  KG+N  TE YSV KAE  +P    T +N+ L++ L    +V+I G+ALSHCVN++ RDL+AAWP+ R+ DL +L   SSPV GFE  A +FL  +  RGV +    +
Sbjct:   59 AILVIDQQVSFHPGGSLAIPTANEDAARIAAFITNHTSELSQIILTMDSHQRYHIAHGIFWMNDAGESPQPFTTITSKDIKKGVWRPRDSSLSDYVLTYTKALE-ATGKFSLTIWPEHCLIGSPGHNIVPNVLAAAMEWTKRTLKPIQYVMKGSNPFTEHYSVLKAEYELPYDPSTSLNKKLIKSLQRANKVVIVGEALSHCVNYTIRDLVAAWPKKRLSDLFILTDCSSPVPGFEEPAKQFLRDMAARGVTLTTSTE 315          
BLAST of NO01G02610 vs. NCBI_GenBank
Match: XP_009524105.1 (hypothetical protein PHYSODRAFT_557458 [Phytophthora sojae] >EGZ21388.1 hypothetical protein PHYSODRAFT_557458 [Phytophthora sojae])

HSP 1 Score: 256.5 bits (654), Expect = 9.000e-65
Identity = 126/257 (49.03%), Postives = 166/257 (64.59%), Query Frame = 0
Query:   13 LLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDNITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAADETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAWSAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAEPRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQAVEFLGLLKERGVRVVAEVK 270
            LL+ID Q DFH GGSLA+P A++DA RI  F+  +   ++ + +TLDSHQR HI+H +FW++A G SP PFT I   DV AG W   D +LK+Y   YT  LE +SGKF   +WPEHCLIGSPGH +VP V AA   W+  + KP++Y  KG+N  TE YS  KAE  +P    T +N+ALV  L    +V++CG+A+SHCVN + RDL+AAWPE R  DL +L   +SPV GFE    EFL  +   G+ +    +
Sbjct:   21 LLVIDQQVDFHPGGSLAIPTANEDAARIAAFISKHARLLSQLVLTLDSHQRYHIAHGVFWENAEGQSPEPFTLITAKDVAAGVWRPRDPSLKSYVLAYTTALE-ASGKFTLCIWPEHCLIGSPGHNIVPNVHAAAVEWTKLSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPATSLNQALVDSLKLADKVIVCGEAISHCVNCTVRDLVAAWPEERRQDLVILTDCASPVPGFEKAGEEFLRDMAAEGLTLTTSAE 276          
The following BLAST results are available for this feature:
BLAST of NO01G02610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29168.18.600e-10066.28amidases related to nicotinamidase [Nannochloropsi... [more]
XP_012207236.13.300e-6749.04hypothetical protein SPRG_12081 [Saprolegnia paras... [more]
OQS04318.11.300e-6649.41hypothetical protein THRCLA_03434, partial [Thraus... [more]
XP_008608949.13.700e-6648.45hypothetical protein SDRG_05032 [Saprolegnia dicli... [more]
POM78585.16.300e-6649.03hypothetical protein PHPALM_3867 [Phytophthora pal... [more]
POM70370.11.100e-6549.03hypothetical protein PHPALM_13203 [Phytophthora pa... [more]
OWY94778.14.100e-6548.64hypothetical protein PHMEG_00035394 [Phytophthora ... [more]
ETP46572.16.900e-6548.45hypothetical protein F442_07190 [Phytophthora para... [more]
ETP46573.16.900e-6548.45hypothetical protein, variant [Phytophthora parasi... [more]
XP_009524105.19.000e-6549.03hypothetical protein PHYSODRAFT_557458 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008070NSK008070Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02610.1NO01G02610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537303gene_252Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g93gene1436Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02610.1NO01G02610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02610 ID=NO01G02610|Name=NO01G02610|organism=Nannochloropsis oceanica|type=gene|length=1242bp
AAAAACAGCGTCAGAATTCCAGAACTATCTATCCCCTTGCAGCAGCCCAG
CATGGAGGACGGCGGCGACAGCTTCACTCCCTTCGCATTGCTTATCATTG
ATCCACAGgtgtgttatcgggcatgataagtcaccaccacaaccttccca
tctcctcgccttactaaaaaagcagctttcctcccttcgttttccagGCC
GATTTCCACCAGGGTGGCTCTTTGGCAGTGCCAGGTGCCGATGATGACGC
GCAACGCATTCAGAATTTTGTGGAGGGGAACTTAGATAACATCACCAATA
TCTACGTGACGTTGGACTCCCATCAGgtgagcagatgggctcgggtcgga
agtgggagacggagctccgagctctgatggatttgatgagtgctgatcta
gccgtccttcaacatcgcagCGGGTCCACATCAGTCACCCTTTATTCTGG
AAAGATGCAAATGGGGCATCTCCGGCGCCTTTCACGCCTATCTTGCACAC
CGACGTCGTGGCTGGGAAGTGGATGGCTGCAGACGAGACCCTGAAGGCGT
ATGCGGAAGATTACACCCTGCAATTGGAGACGTCTTCGGGCAAGTTTCAG
CACATTGTTTGGCCCGAGCATTGCTTGATTGGCAGTCCGGGTCATTGTGT
GGTACCTCCTGTCTTGGCTGgtacgtgcgtgcatggccgtgttacaaggg
tcataaaagcgttgaatgatgcaaacaatggttggcgcgcagaacatctc
ccatttgagacctaacacgcacttttccgcgccaacctgtctcctacggc
ttgctattcttagctgtatataattctacggtctcttgcttaccttttcc
tttcttaccccccaccagCAATTCACGCTTGGTCCGCTCATACCCGCAAG
CCCATTCGTTACTACTGGAAAGGCACCAACATCCGCACCGAAATGTACAG
CGTTTTCAAAGCCGAAGTTCCCGTCCCTGGCTGTGCGGAAACAGAAGTTA
ACGAAGCGTTGGTGCGGGAGTTAGTCGCGGAGCCTCGGGTTATGATTTGT
GGGCAAGCCTTGTCTCACTGTGTTAATTTTTCGACGCGAGACCTTCTTGC
GGCCTGGCCCGAGGGGAGGATGGATGACTTAACGTTGTTGGCGGGGATGA
GCTCTCCGGTGATAGGTTTTGAGGGGCAGGCAGTAGAGTTCTTAGGCCTG
TTGAAGGAAAGGGGGGTTCGGGTCGTGGCGGAGGTGAAGTAG
back to top

protein sequence of NO01G02610.1

>NO01G02610.1-protein ID=NO01G02610.1-protein|Name=NO01G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MEDGGDSFTPFALLIIDPQADFHQGGSLAVPGADDDAQRIQNFVEGNLDN
ITNIYVTLDSHQRVHISHPLFWKDANGASPAPFTPILHTDVVAGKWMAAD
ETLKAYAEDYTLQLETSSGKFQHIVWPEHCLIGSPGHCVVPPVLAAIHAW
SAHTRKPIRYYWKGTNIRTEMYSVFKAEVPVPGCAETEVNEALVRELVAE
PRVMICGQALSHCVNFSTRDLLAAWPEGRMDDLTLLAGMSSPVIGFEGQA
VEFLGLLKERGVRVVAEVK*
back to top
Synonyms
Publications