NO01G02090, NO01G02090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02090 vs. NCBI_GenBank
Match: AML79519.1 (putative LOV domain-containing protein [Sargassum thunbergii]) HSP 1 Score: 218.8 bits (556), Expect = 3.800e-53 Identity = 108/188 (57.45%), Postives = 142/188 (75.53%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMA-EQAPEVLGSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVID 448 A+R+R+RKKF+ ESLQK V L+ +N KL+ ++ N+ E+A E+L S+++ S EA+ +L+ D++LVK+LQTAQQ+FV+TDP+LPDNPIVFASQGFL++TGY++ QVLGRNCRFLQGP TDP AVEKIRK + G D SV L NY+ DG FWNQFF+A LRD G V+ +VG QC +D Sbjct: 17 AKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGPEEAKELL--TQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDASVCLRNYRVDGAMFWNQFFIAALRDSEGTVINYVGVQCKVD 202
BLAST of NO01G02090 vs. NCBI_GenBank
Match: CBN77970.1 (aureochrome 3 [Ectocarpus siliculosus]) HSP 1 Score: 218.0 bits (554), Expect = 6.400e-53 Identity = 107/188 (56.91%), Postives = 143/188 (76.06%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMA-EQAPEVLGSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVID 448 A+R+R+RKKF+ ESLQK V L+ +N KL+ ++ N+ E+A E+L T ++++ +A+ +L+ D++LVK+LQTAQQ+FV+TDP+LPDNPIVFASQGFL++TGY++ QVLGRNCRFLQGP TDP AVEKIRK + G DTSV L NY+ DG FWNQFF+A LRD G V+ +VG QC +D Sbjct: 52 AKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRSNLGPEEAKELLAE-TETPTTLISSRPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGTVINYVGVQCKVD 238
BLAST of NO01G02090 vs. NCBI_GenBank
Match: AML78526.1 (putative LOV domain-containing protein [Sargassum horneri]) HSP 1 Score: 218.0 bits (554), Expect = 6.400e-53 Identity = 108/188 (57.45%), Postives = 142/188 (75.53%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMA-EQAPEVLGSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVID 448 A+R+R+RKKF+ ESLQK V L+ +N KL+ ++ N+ E+A E+L S+++ S EA+ +L+ D++LVK+LQTAQQ+FV+TDP+LPDNPIVFASQGFL++TGY++ QVLGRNCRFLQGP TDP AVEKIRK + G D SV L NY+ DG FWNQFF+A LRD G V+ +VG QC +D Sbjct: 17 AKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGPEEAKELL--TQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDASVCLRNYRVDGAMFWNQFFIAALRDSEGIVINYVGVQCKVD 202
BLAST of NO01G02090 vs. NCBI_GenBank
Match: AHB33796.1 (aureochrome 1 [Nannochloropsis gaditana]) HSP 1 Score: 217.6 bits (553), Expect = 8.400e-53 Identity = 109/198 (55.05%), Postives = 149/198 (75.25%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMAEQAPEVLGSCTARLPSIVTESMAEASTL-----LERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVIDR-PMEE 453 A+R+R+RKKF+ ESLQ Q++ L+++N++L+++V + ++A +L C+ SI T+++ + L L D LV +LQ AQQ+F V+DPSLPDNPI++ASQGFLD+TGY+ Q++GRNCRFLQGP TDPAAV+ IR+GVA G DTSV LLNY+ADGT FWNQFFVA LRD+ G +V +VG QC ++ PMEE Sbjct: 257 AKRSRMRKKFMLESLQAQMLALRKENLRLRQLVATKLPDKADTILRGCS----SIKTQNLLSSVELGHHRALADHDGRLVSALQFAQQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVGVQCKVEEAPMEE 450
BLAST of NO01G02090 vs. NCBI_GenBank
Match: EWM29406.1 (aureochrome1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 217.6 bits (553), Expect = 8.400e-53 Identity = 109/198 (55.05%), Postives = 149/198 (75.25%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMAEQAPEVLGSCTARLPSIVTESMAEASTL-----LERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVIDR-PMEE 453 A+R+R+RKKF+ ESLQ Q++ L+++N++L+++V + ++A +L C+ SI T+++ + L L D LV +LQ AQQ+F V+DPSLPDNPI++ASQGFLD+TGY+ Q++GRNCRFLQGP TDPAAV+ IR+GVA G DTSV LLNY+ADGT FWNQFFVA LRD+ G +V +VG QC ++ PMEE Sbjct: 269 AKRSRMRKKFMLESLQAQMLALRKENLRLRQLVATKLPDKADTILRGCS----SIKTQNLLSSVELGHHRALADHDGRLVSALQFAQQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVGVQCKVEEAPMEE 462
BLAST of NO01G02090 vs. NCBI_GenBank
Match: AML77774.1 (putative LOV domain-containing protein [Dictyopteris undulata]) HSP 1 Score: 217.6 bits (553), Expect = 8.400e-53 Identity = 107/188 (56.91%), Postives = 143/188 (76.06%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNM-AEQAPEVLGSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVID 448 A+R+R+RKKF+ ESLQK V L+ +N KL+ ++ N+ AE+A E+L +++ + +A+ +L+ D++LVK+LQTAQQ+FV+TDP+LPDNPIVFASQGFL++TGY++ QVLGRNCRFLQGP TDP AVEKIRK + G DTSV L NY+ DG FWNQFF+A LRD G V+ +VG QC +D Sbjct: 72 AKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLSAEEAKELLEQ--TETSNLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGVMFWNQFFIAALRDSEGAVINYVGVQCKVD 257
BLAST of NO01G02090 vs. NCBI_GenBank
Match: BAH80322.2 (aureochrome1-like protein [Ochromonas danica]) HSP 1 Score: 216.9 bits (551), Expect = 1.400e-52 Identity = 101/186 (54.30%), Postives = 140/186 (75.27%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMAEQAPEVLGSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVI 447 A+R+R+RKKF+ ESLQ V L+ +N KL+ ++ N+ +A ++L C+ PS++ A+ L+ D++LVK+LQTAQQ+FV++DPS+PDNPIV+ASQGFL +TGY++ +VLGRNCRFLQGP TDP AVEK+RKG+ G DT+V LLNY+ DG+ FWNQ F+A LRD G VV ++G QC + Sbjct: 111 AKRSRVRKKFLLESLQHSVRALEEENEKLRNAIRENLQGEAEQLLTRCSCGGPSVIASDPNTATRTLDDPDYSLVKALQTAQQNFVISDPSIPDNPIVYASQGFLTLTGYALSEVLGRNCRFLQGPETDPKAVEKVRKGLERGEDTTVVLLNYRKDGSTFWNQLFIAALRDGEGNVVNYLGVQCKV 296
BLAST of NO01G02090 vs. NCBI_GenBank
Match: AML77494.1 (putative LOV domain-containing protein [Scytosiphon lomentaria]) HSP 1 Score: 216.9 bits (551), Expect = 1.400e-52 Identity = 103/186 (55.38%), Postives = 138/186 (74.19%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMAEQAPEVLGSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVI 447 A+R+R+RKKF+ ESLQ+ V LK +N KLK ++ ++ Q + L P ++ + +A+ +L+ DF+ +K+LQTAQQ+FVVTDPSLPDNPIV+A+QGFL++TGY++ QVLGRNCRFLQGP TDP AVEKIRK + G+D SV LLNY+ DGT FWNQFF+A LRD G + +VG QC + Sbjct: 17 AKRSRIRKKFLLESLQQSVSLLKDENEKLKNSIRGHLGNQEADALLGAKGVDPGLIANNSMDANKVLDDPDFSFIKALQTAQQNFVVTDPSLPDNPIVYATQGFLNLTGYTLDQVLGRNCRFLQGPETDPKAVEKIRKSIEEGTDMSVCLLNYRVDGTTFWNQFFIAALRDAAGNITNYVGVQCKV 202
BLAST of NO01G02090 vs. NCBI_GenBank
Match: EJK65981.1 (hypothetical protein THAOC_13120 [Thalassiosira oceanica]) HSP 1 Score: 213.8 bits (543), Expect = 1.200e-51 Identity = 103/193 (53.37%), Postives = 141/193 (73.06%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMAEQAPEVL-------GSCTARLPSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVI 447 A+R+R+RKKF+ ESLQ+ V LK +N KLK ++ ++ E+ E L + ++ ++ + ++A+ +L+ DF+ +K+LQTAQQ+FVVTDPSLPDNPIV+A+QGFL++TGY++ QVLGRNCRFLQGP TDP AVEKIR + GSD SV LLNY+ DGT FWNQFF+A LRD G + +VG QC + Sbjct: 311 AKRSRIRKKFLLESLQQSVSLLKEENGKLKNAIRTHLGEKEAEALLNKQALADAASSGGGGLIANNKSDANRVLDDPDFSFIKALQTAQQNFVVTDPSLPDNPIVYATQGFLNLTGYTLDQVLGRNCRFLQGPETDPKAVEKIRNAIEEGSDMSVCLLNYRVDGTTFWNQFFIAALRDAGGNITNYVGVQCKV 503
BLAST of NO01G02090 vs. NCBI_GenBank
Match: XP_005854445.1 (hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526] >EKU21911.1 hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526] >EWM26768.1 aureochrome1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 213.8 bits (543), Expect = 1.200e-51 Identity = 103/187 (55.08%), Postives = 141/187 (75.40%), Query Frame = 0 Query: 261 ARRTRLRKKFIFESLQKQVMDLKRQNMKLKRIVKVNMAEQAPEVLGSCTARL-PSIVTESMAEASTLLERGDFNLVKSLQTAQQSFVVTDPSLPDNPIVFASQGFLDMTGYSMGQVLGRNCRFLQGPRTDPAAVEKIRKGVATGSDTSVALLNYKADGTAFWNQFFVAPLRDLNGEVVYFVGAQCVI 447 A+R+R+RKKF+ ESLQK V L+ +N KL+ ++ ++ E A ++L +C + SI+ A+ +L+ D+ LVK+LQTAQQ+FV+TDP+LPDNPIV+AS GFL +TGY M Q+LGRNCRFLQGP TDPAAV+KIR+ + G+D SV LLNY+ADG+ FWNQFF+A LR +G +V +VG QC + Sbjct: 17 AKRSRVRKKFLLESLQKSVNALQEENDKLRGAIRSHLKEGADDLLKTCEVEVDESILASDPCSATKILDDPDYTLVKALQTAQQNFVITDPTLPDNPIVYASGGFLSLTGYQMDQILGRNCRFLQGPDTDPAAVDKIRRAIEDGTDGSVCLLNYRADGSTFWNQFFIAALRGADGNIVNYVGVQCKV 203 The following BLAST results are available for this feature:
BLAST of NO01G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02090 ID=NO01G02090|Name=NO01G02090|organism=Nannochloropsis oceanica|type=gene|length=2865bpback to top protein sequence of NO01G02090.1 >NO01G02090.1-protein ID=NO01G02090.1-protein|Name=NO01G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bpback to top Synonyms
Publications
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