NO01G01690, NO01G01690 (gene) Nannochloropsis oceanica

Overview
NameNO01G01690
Unique NameNO01G01690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1671
Alignment locationchr1:427557..429227 +

Link to JBrowse

Properties
Property NameValue
DescriptionRna binding motif protein 19
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:427557..429227 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
Homology
BLAST of NO01G01690 vs. NCBI_GenBank
Match: EWM29054.1 (rna binding motif protein 19 [Nannochloropsis gaditana])

HSP 1 Score: 709.1 bits (1829), Expect = 1.100e-200
Identity = 391/566 (69.08%), Postives = 442/566 (78.09%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTF--KAGGSRNSDVE------VGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAA---GKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKDARKGAASALXXXXXXXXXXXXXXKWESAFDEGFD 557
            ELL   G VA++HLPLDD  RPKGFAFASFL+PEDA RA+ A+D +AFQGRLLHVL A+E P+DPLA+ DP +ARTYKE+KEIERRQ+AGDERGWNASYLRSETVVEAVA+RL+LEKGQVLDR+GG+MAVKLALGETFLLAENREFF+ EGVDLTVLES                         RSKTT+LVKNLPYSTT+EELTQLFGRFG + +V+LPPSR++ LVDFLE A+AK+AFKGLAYKRF+HVPLYLEWAP+HTF  K  G  N++ E       G+   AD  AP+             +  V +   EEE +GSFTLFVKNLNFAT+EEKLLA+FKSKTQGVRTVAIPKK+APV AA    KE  K S++    LSMGYGFVEY  VA+A+AALR MEG  LDGHRLQCKLS KRL+AR +  AKN++KRTKLVVRNVAFQAT KE+KELF  FGKVKTVRLPKKFDGSHRGFAFVEFLTAQEA NAFVALSSTHLYGKRLVLEWAEDKED+ETLREKA+KDARKGAASAL              K  S FD+GF+
Sbjct:  435 ELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLES---AAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQ----------IGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGK-SNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSAR-VPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGAASALSNEAAGSGGGFLKKKGGSTFDKGFE 985          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: OQS05793.1 (RNA-binding protein [Thraustotheca clavata])

HSP 1 Score: 447.2 bits (1149), Expect = 7.400e-122
Identity = 251/522 (48.08%), Postives = 339/522 (64.94%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEE-PDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            EL   +G + EVH+PLDDTKR KGF F  F    +A  A  A+DG+ FQGRLLH+LPAK   +    +   +   TYK+KKEIER+Q A ++ GWNASY+R +  V+A+A RL ++KG++LD+D G MAV+LA+GET LL EN+ FF+ EGVDL+V+E                          RS T LL+KNLP+ST +  L QLF   G+L R ILPPS+T+AL++F+EA++A+KAF+ LAYK+FQ+VPLYLEWAP+  FK                     P + T  +KVK  AL      +VE E   +   TL VKNLNF+TTE+ L A F+ K   VR   I +K  P             +    LSMG+GFVE+ + A AK A+ +++G +LDGH +  KLS K+L A    A+++K+  TK++ RN+AF+AT K+++ELFG+FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF +L+S+HLYG+ LVLEWAED +DI+TLR KAS+D
Sbjct: 1020 ELFAGYGTITEVHMPLDDTKRTKGFGFIMFKSTAEATAAREALDGKPFQGRLLHILPAKGKLEPEALDTSTL---TYKQKKEIERKQLANNKVGWNASYIRGDATVDALASRLNVKKGEILDKDAGNMAVRLAIGETMLLQENQAFFEQEGVDLSVIEG---------------STAKSKKATERSTTVLLIKNLPFSTDEVALAQLFRTHGELTRFILPPSKTMALIEFVEASEARKAFRSLAYKKFQNVPLYLEWAPVKVFK--------------------GPPKMTYSEKVKSQALSLPARPEVEAENVAELDNTLCVKNLNFSTTEKTLQALFE-KMGTVRKATIARKKDP------------KTQKPTLSMGFGFVEFNTAAAAKKAMTQLQGNLLDGHAIDIKLSKKQL-APVKKASQSKKPSTKVICRNIAFEATIKDIRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFASLASSHLYGRHLVLEWAEDADDIDTLRAKASRD 1489          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: XP_012195254.1 (hypothetical protein SPRG_19058 [Saprolegnia parasitica CBS 223.65] >KDO34220.1 hypothetical protein SPRG_19058 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 443.7 bits (1140), Expect = 8.200e-121
Identity = 247/521 (47.41%), Postives = 336/521 (64.49%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            EL   +G + E+H+PLDD+KR KGF F  F    +A  A  A+DG+AFQGRLLH+LPAK    +P A +D     TYK+KKEIER+Q A  + GWNAS++R +  V+A+A RL ++KG++LD+D G MAV+LA+GET LL EN+ FF+ EGVDL V+E                          RS T LLVKNLP++T +  L QLF  +G+L R +LPPS+T+AL++F+EA++A+KAF+ LAYK+FQ +PLYLEWAP+  FK   + N   ++  +  A  A P            AL +V    V E +     TL VKNLNF+TTE+ L + F+ K   VR   I +K  P             +    LSMG+GFVEY + A AK A+  + G +LDGH +  KLS K+L      A  +K+  TK++ RN+AF+AT K+++ELFG+FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF +L+S+HLYG+ LVLEWA+D +D+ETLR KAS+D
Sbjct:  296 ELFAGYGTITELHMPLDDSKRTKGFGFVMFASQAEATAARTALDGKAFQGRLLHILPAK-GKLEPEALVDTANL-TYKQKKEIERKQLAASKVGWNASFIRGDATVDALASRLNVKKGEILDKDAGNMAVRLAIGETMLLQENQAFFEQEGVDLRVIEG------------AAAAKGKKGPSVERSNTVLLVKNLPFTTDETALAQLFRTYGELSRFVLPPSKTMALIEFVEASEARKAFRSLAYKKFQTMPLYLEWAPVKVFKGPATMNYAEKI--KAQAQAATP------------ALPDVEADNVAELDN----TLCVKNLNFSTTEKSLQSLFE-KMGTVRKATIARKKDP------------KTQKPTLSMGFGFVEYSTAAAAKKAMAGLHGTLLDGHAIDIKLSKKQLAPVKKAAGPSKKPSTKVICRNIAFEATIKDIRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFASLASSHLYGRHLVLEWADDADDMETLRAKASRD 771          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: XP_008611985.1 (hypothetical protein SDRG_07904 [Saprolegnia diclina VS20] >EQC34579.1 hypothetical protein SDRG_07904 [Saprolegnia diclina VS20])

HSP 1 Score: 441.0 bits (1133), Expect = 5.300e-120
Identity = 245/521 (47.02%), Postives = 335/521 (64.30%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            EL   +G + E+H+PLDD+KR KGF F  F    +A  A  A+DG+AFQGRLLH+LPAK    +P A +D     TYK+KKEIER+Q A  + GWNAS++R +  V+A+A RL ++KG++LD+D G MAV+LA+GET LL EN+ FF+ EGVDL V+E                          RS T LLVKNLP++T +  L QLF  +G+L R +LPPS+T+AL++F+EA++A+KAF+ LAYK+FQ +PLYLEWAP+  FK   + N   ++  +  A  AAP            AL +V    V E +     TL VKNLNF+T+E+ L   F+ K   VR   I +K  P             +    LSMG+GFVEY + A AK A+  + G +LDGH +  KLS K+L         +K+  TK++ RN+AF+AT K+++ELFG+FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF +L+S+HLYG+ LVLEWA+D +D++TLR KAS+D
Sbjct:  318 ELFAGYGTITELHMPLDDSKRTKGFGFIMFASQAEATAARTALDGKAFQGRLLHILPAK-GKLEPEALVDTANL-TYKQKKEIERKQLAASKVGWNASFIRGDATVDALASRLNVKKGEILDKDAGNMAVRLAIGETMLLQENQAFFEQEGVDLRVIEG------------AAAAKGKKGPSIERSNTVLLVKNLPFTTDETALAQLFRTYGELSRFVLPPSKTMALIEFVEASEARKAFRSLAYKKFQTMPLYLEWAPVKVFKGAATMNYAEKI--KAQAQAAAP------------ALPDVEADNVAELDN----TLCVKNLNFSTSEKSLQTLFE-KMGTVRKATIARKKDP------------KTQKPTLSMGFGFVEYSTAAAAKKAMAGLHGTLLDGHAIDIKLSKKQLAPVKKATGPSKKPSTKVICRNIAFEATIKDIRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFASLASSHLYGRHLVLEWADDADDMDTLRAKASRD 793          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: OQR84771.1 (RNA-binding protein [Achlya hypogyna])

HSP 1 Score: 441.0 bits (1133), Expect = 5.300e-120
Identity = 245/523 (46.85%), Postives = 338/523 (64.63%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEE-PDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLT-ARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            EL   +G++ EVH+PLDD+KR KGF F  F    +A+ A AA+DG+ FQGRLLHVLPAK    +P A +D     TYK+KKE+ER+Q A ++ GWNAS++R +  V+A+A RL ++KG++LD+D G MAV+LA+GET LL EN++FF+ EGVDL V+E                          RS T LLVKNL ++T +  L QLF  +G+L R +LPPS+T+AL++F+EA++A+KAF+ LAYK+FQ++PLYLEWAP+  FK                     P   +  +K+K  A       +VE +   +   TL VKNLNFATTE+ L A F+ K   VR   I +K  P             +    LSMG+GFVE+ + A AK A+ ++ G +LDGH +  KLS K+L   +   AA + +  TK++ RN+AF+AT K+++ELFG+FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF +L+S+HLYG+ LVLEWAED ED++TLR KA +D
Sbjct:  306 ELFAGYGRITEVHMPLDDSKRTKGFGFVMFASEAEASAARAALDGKPFQGRLLHVLPAK-GKLEPEALVDTANL-TYKQKKEMERKQLANNKVGWNASFIRGDATVDALASRLNVQKGEILDKDAGNMAVRLAIGETMLLQENQQFFEQEGVDLGVIEG-------------AAAKTKKGPAIERSSTVLLVKNLAFTTDETALAQLFRTYGELSRFVLPPSKTMALIEFVEASEARKAFRSLAYKKFQNMPLYLEWAPVKVFK--------------------GPATMSYTEKLKAQAAAAPARPEVEADNVAELDNTLCVKNLNFATTEKSLQALFE-KVGHVRKATIARKKDP------------KTQKPTLSMGFGFVEFGTAAAAKKAMAQLHGTLLDGHAIDIKLSKKQLAPVKKSAAASSAKPSTKVICRNIAFEATIKDIRELFGAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFASLASSHLYGRHLVLEWAEDAEDLDTLRAKAGRD 780          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: XP_009824063.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV87264.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 430.6 bits (1106), Expect = 7.200e-117
Identity = 248/528 (46.97%), Postives = 334/528 (63.26%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPM-----QARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAKNKQK--RTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            EL   +G + E+H+PLDD KR KGF F  F    +A  A AA+DG+AFQGRLLHVL AK       A+L+P+        TYK++KE ER+  A  + GWNASY+R +  V+A+A RLQ+ KG +LD++ G MAV+LA+GET LL EN+ FF+ EGVD+ V+E                          RS T LLVKNLP+ST +  L QLF  +G+L R +LPPS+T+ALV+F+EA++A+KAF+ LAYK+FQHVPLYLEWAP+  FKA  +    +    ++ A    P   T+P         +V    V E +     TL VKNLNF TTE  L A F+ K   +R V I +K                S    LSMG+GFVE+ + A AK A++ ++G +L+GH +  K+S K+L      AAK+     +TK++ RN+AF+AT K+++ELF +FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF ALSS+HLYG+ LVLEWAED +D++TLR KAS+D
Sbjct:  301 ELFAGYGTIVELHMPLDDNKRTKGFGFVLFQSMAEADAARAALDGKAFQGRLLHVLAAK-------AKLEPVGVEDTSTLTYKQRKEAERKALANTKVGWNASYIRGDATVDALAARLQVNKGDILDKESGNMAVRLAIGETILLQENQSFFEQEGVDVKVMEG----------------AATKKSSAERSSTVLLVKNLPFSTDETALAQLFRTYGELARFVLPPSKTMALVEFMEASEARKAFRTLAYKKFQHVPLYLEWAPVKVFKAPAT----MTYSDKLKAASNGPAAATRP---------DVEADNVAELDN----TLCVKNLNFTTTEAVLKAAFE-KCGTLRKVTIARKK-------------DRSGKLTLSMGFGFVEFGTAAAAKKAMQSLQGNLLEGHAMDIKVSRKQLQPAKAQAAKSAANVPKTKVICRNIAFEATVKDVRELFAAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEAKSAFAALSSSHLYGRHLVLEWAEDADDLDTLRAKASRD 774          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: XP_008865717.1 (hypothetical protein H310_03574 [Aphanomyces invadans] >ETW05940.1 hypothetical protein H310_03574 [Aphanomyces invadans])

HSP 1 Score: 428.3 bits (1100), Expect = 3.600e-116
Identity = 241/521 (46.26%), Postives = 326/521 (62.57%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            EL   +G + E+H+PLDD KR KGF F  F    +A  A AA+DG+ FQGRL+HVLPAK    +P+ +       TYK++KE ER+  A  + GWNASY+R +  V+A+A RLQ+ KG +LD++ G MAV+LA+GET LL EN+ FF+ EGVD+ V+E                          RS T LLVKNLP+ST +  L QLF   G+L R +LPPS+T+ALV+F+E ++A+KAF+ LAYK+FQHVPLYLEWAP+  FKA  +     ++     +         +P         +V    V E +     TL VKNLNF+TTE  L A F+ K   +R V I +K                     LSMG+GFVE+ + A AK A++ ++G +L+GH +  KLS K+L       AK +  +TK++ RN+AF+AT K+++ELF +FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF ALSS+HLYG+ LVLEWAED +D+ETLR KAS+D
Sbjct:  309 ELFAGYGTIVELHMPLDDNKRTKGFGFVLFQTTAEAEAARAALDGKPFQGRLMHVLPAK-AKLEPVVDTSDNSTLTYKQRKEAERKALANTKVGWNASYIRGDATVDALASRLQVNKGDILDKESGNMAVRLAIGETILLQENQAFFEQEGVDVKVMEG----------------AAAKKSNAERSNTVLLVKNLPFSTDETALAQLFRTHGELARFVLPPSKTMALVEFMEPSEARKAFRTLAYKKFQHVPLYLEWAPVKVFKAPATMTYSEKLKAAGNSTSGGGASAARP---------DVEADNVTELDN----TLCVKNLNFSTTEAVLKAAFE-KYGTLRKVTIARKK-------------DRHGKLNLSMGFGFVEFSTSAAAKNAMQMLQGNLLEGHAMDIKLSRKQLQPVKAKPAKTETPKTKVICRNIAFEATVKDVRELFAAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEATSAFAALSSSHLYGRHLVLEWAEDADDLETLRAKASRD 785          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: CBN74300.1 (RNA binding protein [Ectocarpus siliculosus])

HSP 1 Score: 426.0 bits (1094), Expect = 1.800e-115
Identity = 255/545 (46.79%), Postives = 330/545 (60.55%), Query Frame = 0
Query:    2 ELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAE------LDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAP-VETTQPQKVKKIALVEVVEKKVEEEEPDGS------FTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAAK---------NKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKDAR 525
            +L    G ++EVHLP+DD K+ KGFAF  F++PEDA +AL  +D  AF GRLLH++PA+  P    AE                    ++RR +AGD  GWNAS++RS+TVV+A+ADRL + K  +LDR+ G+MAV+LALGET L+ EN+E+F+ EGVDL+VLES                         RS T +LVKNLPYS    EL + FG FG +GRV+LPPS+T+ALV+FL A+DAKKAFK LA  RFQHV LYLEWAP+  FK                 D   P          +K A  E  E KV+E+E           T+FVKNL+F+TTE  L   F+     VR+V+IP+K  P             +S A LSMG+GFVE    +    +L+ ++G +LDGH L+ K S KRLT  P T            +  KRTK+++RN+ FQAT+KE++EL  SFG++K VRLPKKFDG HRGFAFV+FLTAQEA  A  +L STH YG+ LV EWAED ED++TLR KA++D R
Sbjct:  351 DLFGSFGMLSEVHLPVDDVKKGKGFAFVQFVIPEDAGKALEQLDRHAFHGRLLHIIPARRQPGSSGAEAXXXXXXXXXXXXXXXXXXXMDRRARAGDTVGWNASFVRSDTVVDALADRLGVGKSDILDREEGDMAVRLALGETLLVKENKEYFEKEGVDLSVLES-------------TKGKGSGKGAEERSSTVILVKNLPYSAEAAELAKRFGAFGDVGRVLLPPSKTVALVEFLAASDAKKAFKRLACARFQHVLLYLEWAPLKAFK-----------------DTFEPSXXXXXXXXXEKAATGE--EAKVDEDEVAAGRASKEPLTMFVKNLSFSTTEAGLRTCFEKAGLQVRSVSIPRKKGP------------GASEATLSMGFGFVECADASLVDKSLKTLQGTVLDGHALELKRSTKRLT--PATXXXXXXXXXXXGDSLKRTKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGGHRGFAFVDFLTAQEAMGAKKSLESTHFYGRHLVGEWAEDGEDMDTLRAKAARDLR 849          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: KUF83624.1 (Multiple RNA-binding domain-containing protein 1 [Phytophthora nicotianae])

HSP 1 Score: 422.2 bits (1084), Expect = 2.600e-114
Identity = 235/529 (44.42%), Postives = 337/529 (63.71%), Query Frame = 0
Query:    3 LLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQAR-----TYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVK-KIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAA---KNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            L + +G V EVH+PLDDT+R KG+ F  F    DA  AL A++G AFQGR LHV+ A+  P     +LDP  A+     TYK++KE+ER+ +A  + GWNASY+R +  V ++A+R+ +++G+++D++ G MAV+LA+GET L+ EN++FF  EGVDL  +E                          RS T +L+KNLP++T +EEL QLF + G++GR +LPPS+T+A+V+FLE ++A+KAF+ LAYK++QHVPLYLEWAP+  F    S               +    T++ + +K   A+V  V+   +    D   T+ VKNLNF+T E  L   F S+   +R V + ++  P                 +LSMG+GFVEY      + AL+ ++  ++DGH L  KLS K+ +A P  AA     + +++K++VRNVAF+ATS E++ELFG+FG++K VR+PKKFDG HRGFAFVEFLT QEA NAF AL+S+HLYG+ LVLEWAED +DI+TLR KA++D
Sbjct:  306 LCSTYGPVEEVHMPLDDTRRRKGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVIFARSKP----VKLDPEAAQADPNLTYKQRKELERQIQAQKKTGWNASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLNAIEG----------ALVKKPNQQQSKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPAS---------------SVNASTSEQKGIKTTAAVVPDVDDDGDTAVGDACHTICVKNLNFSTKEAALEKIF-SRCGKLRKVTVARRKDP--------------KRGMLSMGFGFVEYVDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIDTLRAKATRD 790          
BLAST of NO01G01690 vs. NCBI_GenBank
Match: KUF94379.1 (hypothetical protein AM588_10009855 [Phytophthora nicotianae])

HSP 1 Score: 422.2 bits (1084), Expect = 2.600e-114
Identity = 235/529 (44.42%), Postives = 337/529 (63.71%), Query Frame = 0
Query:    3 LLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPLAELDPMQAR-----TYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESXXXXXXXXXXXXXXXXXXXXXXXXXRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVK-KIALVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLTARPLTAA---KNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLREKASKD 523
            L + +G V EVH+PLDDT+R KG+ F  F    DA  AL A++G AFQGR LHV+ A+  P     +LDP  A+     TYK++KE+ER+ +A  + GWNASY+R +  V ++A+R+ +++G+++D++ G MAV+LA+GET L+ EN++FF  EGVDL  +E                          RS T +L+KNLP++T +EEL QLF + G++GR +LPPS+T+A+V+FLE ++A+KAF+ LAYK++QHVPLYLEWAP+  F    S               +    T++ + +K   A+V  V+   +    D   T+ VKNLNF+T E  L   F S+   +R V + ++  P                 +LSMG+GFVEY      + AL+ ++  ++DGH L  KLS K+ +A P  AA     + +++K++VRNVAF+ATS E++ELFG+FG++K VR+PKKFDG HRGFAFVEFLT QEA NAF AL+S+HLYG+ LVLEWAED +DI+TLR KA++D
Sbjct:  225 LCSTYGPVEEVHMPLDDTRRRKGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVIFARSKP----VKLDPEAAQADPNLTYKQRKELERQIQAQKKTGWNASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLNAIEG----------ALVKKPNQQQSKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPAS---------------SVNASTSEQKGIKTTAAVVPDVDDDGDTAVGDACHTICVKNLNFSTKEAALEKIF-SRCGKLRKVTVARRKDP--------------KRGMLSMGFGFVEYVDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIDTLRAKATRD 709          
The following BLAST results are available for this feature:
BLAST of NO01G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29054.11.100e-20069.08rna binding motif protein 19 [Nannochloropsis gadi... [more]
OQS05793.17.400e-12248.08RNA-binding protein [Thraustotheca clavata][more]
XP_012195254.18.200e-12147.41hypothetical protein SPRG_19058 [Saprolegnia paras... [more]
XP_008611985.15.300e-12047.02hypothetical protein SDRG_07904 [Saprolegnia dicli... [more]
OQR84771.15.300e-12046.85RNA-binding protein [Achlya hypogyna][more]
XP_009824063.17.200e-11746.97hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_008865717.13.600e-11646.26hypothetical protein H310_03574 [Aphanomyces invad... [more]
CBN74300.11.800e-11546.79RNA binding protein [Ectocarpus siliculosus][more]
KUF83624.12.600e-11444.42Multiple RNA-binding domain-containing protein 1 [... [more]
KUF94379.12.600e-11444.42hypothetical protein AM588_10009855 [Phytophthora ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01690.1NO01G01690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01690.1NO01G01690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01690 ID=NO01G01690|Name=NO01G01690|organism=Nannochloropsis oceanica|type=gene|length=1671bp
ATGGAGTTGCTAACCCACCACGGGCAAGTCGCCGAAGTCCACCTTCCCCT
CGACGACACTAAGCGGCCCAAAGGTTTCGCCTTCGCTTCCTTCCTCCTTC
CTGAGGATGCCGCACGGGCACTCGCCGCCGTTGATGGACAGGCATTTCAA
GGGCGATTGTTGCATGTGTTACCCGCCAAGGAACCACCCAAAGACCCTCT
GGCCGAGCTGGACCCGATGCAAGCACGGACGTACAAGGAAAAGAAGGAGA
TTGAACGCCGACAGAAAGCGGGAGACGAACGAGGGTGGAATGCCAGCTAT
CTCCGTAGTGAGACCGTTGTGGAAGCCGTGGCGGATAGGTTGCAATTGGA
AAAGGGCCAGGTTCTGGATAGGGATGGAGGAGAAATGGCAGTCAAGCTGG
CGTTAGGCGAGACCTTCCTCTTGGCAGAAAACAGAGAGTTTTTCAAGAAT
GAAGGGGTGGATCTGACTGTCCTGGAAAGCGCGGCTGCGCAGCAGGCACG
GAGGAAACAGCAGCAGGCAGCAAAAGGAAACGGAGGAGCAGTGGCGACGG
TCTCGAGGAGTAAGACGACGTTGTTGGTGAAGAATCTACCGTATAGTACA
ACACAGGAAGAGCTGACGCAGCTATTTGGTAGGTTTGGACAGTTGGGGAG
GGTGATCTTGCCCCCAAGTCGCACCATAGCGCTGGTGGACTTCTTGGAGG
CAGCAGATGCGAAGAAGGCATTCAAAGGATTGGCTTACAAGAGGTTTCAG
CATGTACCGCTATATTTGGAGTGGGCACCGATGCATACCTTTAAGGCGGG
GGGGAGTAGGAACAGCGATGTAGAGGTTGGGAAGGAGGTAACTGCTGACG
TTGCTGCTCCTGTGGAGACTACACAGCCGCAAAAGGTCAAGAAGATTGCA
CTAGTGGAGGTGGTGGAGAAGAAAGTGGAGGAGGAAGAGCCCGATGGGTC
ATTCACGCTCTTCGTAAAAAATCTTAACTTCGCGACGACGGAGGAGAAGC
TTTTGGCTTACTTTAAGAGTAAGACTCAGGGGGTTCGGACGGTGGCGATA
CCCAAAAAGAGTGCTCCTGTAAGTGCGGCGGGCAAGGAGAAGGAGAAATG
CAGCAGCAGCAGCAGTGCGGTCTTGTCGATGGGGTATGGTTTCGTGGAGT
ACAGGAGCGTGGCAGAAGCCAAGGCAGCCCTCAGGGAGATGGAAGGGGCT
ATGCTAGATGGCCATCGATTGCAGTGCAAGCTATCCGATAAGCGACTGAC
GGCCCGTCCTCTCACTGCAGCGAAGAACAAGCAAAAGCGTACGAAGCTTG
TGGTGCGAAACGTGGCTTTCCAAGCCACTTCGAAAGAGCTGAAGGAATTG
TTTGGGAGTTTTGGGAAGGTTAAGACGGTGAGGCTGCCAAAGAAGTTCGA
TGGGAGTCATAGGGGGTTTGCGTTTGTGGAGTTTTTGACGGCACAGGAAG
CGGGGAATGCTTTCGTGGCGTTGTCGTCGACACACTTATACGGCAAGAGG
TTGGTGTTGGAATGGGCGGAGGATAAGGAGGACATAGAGACCTTGAGGGA
AAAGGCCTCGAAGGACGCGAGGAAGGGGGCGGCGTCGGCGTTGAGCAATG
AGGGGGGTGGAGGAGGGGCAGGTGAAGGGAAGAAGAAGTGGGAGAGTGCT
TTTGATGAGGGGTTTGATTAA
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protein sequence of NO01G01690.1

>NO01G01690.1-protein ID=NO01G01690.1-protein|Name=NO01G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MELLTHHGQVAEVHLPLDDTKRPKGFAFASFLLPEDAARALAAVDGQAFQ
GRLLHVLPAKEPPKDPLAELDPMQARTYKEKKEIERRQKAGDERGWNASY
LRSETVVEAVADRLQLEKGQVLDRDGGEMAVKLALGETFLLAENREFFKN
EGVDLTVLESAAAQQARRKQQQAAKGNGGAVATVSRSKTTLLVKNLPYST
TQEELTQLFGRFGQLGRVILPPSRTIALVDFLEAADAKKAFKGLAYKRFQ
HVPLYLEWAPMHTFKAGGSRNSDVEVGKEVTADVAAPVETTQPQKVKKIA
LVEVVEKKVEEEEPDGSFTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAI
PKKSAPVSAAGKEKEKCSSSSSAVLSMGYGFVEYRSVAEAKAALREMEGA
MLDGHRLQCKLSDKRLTARPLTAAKNKQKRTKLVVRNVAFQATSKELKEL
FGSFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKR
LVLEWAEDKEDIETLREKASKDARKGAASALSNEGGGGGAGEGKKKWESA
FDEGFD*
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Synonyms
Publications