NO01G01210, NO01G01210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024540063.1 (cyclin-T1-3 [Selaginella moellendorffii]) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-12 Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMK 267 R+ YF KS C FL L L + +V TA+ F HRF+ QS +DR ++AT C++LA K EE V +I V Y L ++ DP NR ++ A K V+ ER +L T+ FDL V HP+R L +K Sbjct: 59 RETYFRKSYCTFLQDLGMRLKVPQVTIATAITFCHRFYLRQSHARNDRFMIATVCMFLAGKVEETPRVLKDVIYVSY-----TLRNKKDPSANNR-IKQKDLYEAQKQLVLYGERLVLTTLGFDLNVHHPYRPLVAAIK 191
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_002971129.2 (cyclin-T1-3 [Selaginella moellendorffii]) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-12 Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMK 267 R+ YF KS C FL L L + +V TA+ F HRF+ QS +DR ++AT C++LA K EE V +I V Y L ++ DP NR ++ A K V+ ER +L T+ FDL V HP+R L +K Sbjct: 59 RETYFRKSYCTFLQDLGMRLKVPQVTIATAITFCHRFYLRQSHARNDRFMIATVCMFLAGKVEETPRVLKDVIYVSY-----TLRNKKDPSANNR-IKQKDLYEAQKQLVLYGERLVLTTLGFDLNVHHPYRPLVAAIK 191
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_020688452.1 (cyclin-T1-3-like isoform X1 [Dendrobium catenatum]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 70/266 (26.32%), Postives = 112/266 (42.11%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIKPPTN-KGTWLEIFHVQDEARFLSDCSLAIQMYGEENSNFQ 393 ++ Y KS C FL L L + +V TA++F HRFF QS +DR+ +AT C++LA K EE +I+V Y P +++ +E K ++ ER +L T+ FDL V HP+R+L D ++ N+ S + A F+ND + +P + AA A++L + +K P++ + W ++F V R L D S + E+N Q Sbjct: 56 KETYLRKSYCTFLRELGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRMTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKGPFAAQEIKH------KEVYEQQKELILLGERLVLATLGFDLNVHHPYRSLVDAIRLF----------------------NVAQS----------------SLAKVAWNFVNDGLRTSLCLQFKPMHIAAGAMFLASKFIKVKLPSDGEKAWWQVFDV--TPRQLEDVSNQLLELYEQNQATQ 275
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380501.1 (cyclin-T1-3-like isoform X6 [Physcomitrella patens] >PNR51205.1 hypothetical protein PHYPA_010391 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380503.1 (cyclin-T1-3-like isoform X8 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380502.1 (cyclin-T1-3-like isoform X7 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380499.1 (cyclin-T1-3-like isoform X4 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380495.1 (cyclin-T1-3-like isoform X1 [Physcomitrella patens] >XP_024380496.1 cyclin-T1-3-like isoform X1 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380497.1 (cyclin-T1-3-like isoform X2 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024380500.1 (cyclin-T1-3-like isoform X5 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 74/280 (26.43%), Postives = 114/280 (40.71%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR +VAT C++LA K EE +I+ Y + + DP+ R ++ K V+ ER LL T+ FDL V HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + SN ++ + P PS + Sbjct: 58 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRF-----KKDPIAVQR-IRQKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEV--TPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEM 291 The following BLAST results are available for this feature:
BLAST of NO01G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01210 ID=NO01G01210|Name=NO01G01210|organism=Nannochloropsis oceanica|type=gene|length=1314bpback to top protein sequence of NO01G01210.1 >NO01G01210.1-protein ID=NO01G01210.1-protein|Name=NO01G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=438bpback to top Synonyms
Publications
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