NO01G00500, NO01G00500 (gene) Nannochloropsis oceanica

Overview
NameNO01G00500
Unique NameNO01G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1436
Alignment locationchr1:132033..133468 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:132033..133468 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO01G00500 vs. NCBI_GenBank
Match: XP_005855521.1 (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20840.1 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 197.6 bits (501), Expect = 7.200e-47
Identity = 133/325 (40.92%), Postives = 183/325 (56.31%), Query Frame = 0
Query:    9 LFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDN---LVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPA 331
            L  GV L +  A V+ ++   +   I RKR+P  P        G IV+TGASTGIG HAA +LA++G+IV+  VRKPAD EA+              Q     +    L P+I+DV +A  I     T+  EL+ + N+P +GLVNNAGV     P+E+ PL   R  F+++  GPL +T+  LP +R   +GRIVN+SS+   V  P GA Y  +K A+E +SD LR EL     SVS++QP Y+++ IF K T+  D +++  P E    YG+ +  +K       V KAS P V + AI HALTS YP TRY   NV+G PA
Sbjct:   19 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKG------GAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAI--------------QALGLPN----LRPIIMDVAQAKSIENGAETILAELS-KNNIPLIGLVNNAGV-AQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRAN-KGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSP-EIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPA 315          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: XP_005855590.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20782.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 195.3 bits (495), Expect = 3.600e-46
Identity = 130/336 (38.69%), Postives = 192/336 (57.14%), Query Frame = 0
Query:   14 LLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +L + +  ++L ++P ++   SR+ YPT PS  +      +V++GASTGIG  AA++LA   F+V+AGVRK  D E L           S  +++        L P+ILDVT    I  A   +  + A RG +P  GLVNNAG+   A  VE+  +   +  ++VN  G L +T+ FLPLLR +  GRIV +SS+AG +T P  + Y  +K ALE+LSD LR+EL H  VSV+V+QPG + S IF K+      ++ E P E   +YGH+      D+++AKA  P   +KAI  AL   YP+TR    N++G PA    +   +L DR+LD+++
Sbjct:    1 MLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGA-----AVVLSGASTGIGYDAAVHLAD-DFVVYAGVRKEKDAEML----------RSVGKST--------LVPVILDVTSQDSIDEAYVKITADAAERG-IPVWGLVNNAGIM-TASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQ-AGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRE-LKVYGHMIKEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 308          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: EWM24343.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 195.3 bits (495), Expect = 3.600e-46
Identity = 130/336 (38.69%), Postives = 192/336 (57.14%), Query Frame = 0
Query:   14 LLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +L + +  ++L ++P ++   SR+ YPT PS  +      +V++GASTGIG  AA++LA   F+V+AGVRK  D E L           S  +++        L P+ILDVT    I  A   +  + A RG +P  GLVNNAG+   A  VE+  +   +  ++VN  G L +T+ FLPLLR +  GRIV +SS+AG +T P  + Y  +K ALE+LSD LR+EL H  VSV+V+QPG + S IF K+      ++ E P E   +YGH+      D+++AKA  P   +KAI  AL   YP+TR    N++G PA    +   +L DR+LD+++
Sbjct:   93 MLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGA-----AVVLSGASTGIGYDAAVHLAD-DFVVYAGVRKEKDAEML----------RSVGKST--------LVPVILDVTSQDSIDEAYVKITADAAERG-IPVWGLVNNAGIM-TASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQ-AGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRE-LKVYGHMIKEGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 400          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: PLY20528.1 (short-chain dehydrogenase/reductase [Nitrospira sp. CG24E])

HSP 1 Score: 194.5 bits (493), Expect = 6.100e-46
Identity = 130/311 (41.80%), Postives = 177/311 (56.91%), Query Frame = 0
Query:   44 SQASNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGG-VLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASD----PVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +Q + +    +VVTGASTGIG   AL    RG  VFAGVR P  GEAL+                   +KGG +L P+ LDVT    I  ++  V++ +   G     GLVNNAG+  G+ P+E + L   R   EVN  G +AVT+AFLPLLRQ  +GRIVN+ S+AG  T PL   YS +KFALEAL+D LRMEL   G+ VS+I+PG I + I+ K+     +      EE   LYG   A+ ++   + +A+     P    +A+HHALTS++PRTRY    + GT A L +W +  L DR+ DR++
Sbjct:    2 NQTNQINQMAVVVTGASTGIGAACALDCVGRGMTVFAGVRDPRAGEALV-------------------AKGGPLLIPIRLDVTDETSIARSVEVVQQVVGEGG---LGGLVNNAGIAIGS-PLEVISLSLLRKQLEVNVIGQIAVTQAFLPLLRQ-GRGRIVNMGSIAGRGTIPLLGPYSASKFALEALTDALRMELQPWGIQVSIIEPGAIATPIWEKSDMAAGELEASASEEAKALYG--VAVVRIREAIVQAAQRAIPPEAVVQAVHHALTSSHPRTRY----LVGTDAKLRAWMVKWLPDRIQDRLL 282          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: WP_017318177.1 (SDR family NAD(P)-dependent oxidoreductase [Mastigocladopsis repens])

HSP 1 Score: 193.7 bits (491), Expect = 1.000e-45
Identity = 127/298 (42.62%), Postives = 167/298 (56.04%), Query Frame = 0
Query:   54 IVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLY--ALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +V+TGASTGIG   AL L Q GF VFAGVRK  D + L     Q                   L P+ LDVT+A  I AA+ T+   +   G    LGLVNNAG+     P+E LP+   +   +VN  G LAVT+AFL LLRQ  +GRIVN+ S++G    P    Y+ +KFALEAL+D +RMEL   G+SVS+I+PG I + I+ K+  Q D   Q LP+    LYGH      KKV  L +K   P + ++A+ HALT+  P TRY    + G  A + +    IL D+L DR+I
Sbjct:    9 VVITGASTGIGEACALLLDQLGFFVFAGVRKDIDAQKLKCKASQR------------------LIPIFLDVTEAESIAAAVETLTNAVGGGG---ILGLVNNAGI-AVPGPLELLPIAEFQQQLQVNVTGQLAVTQAFLGLLRQS-RGRIVNMGSISGRSPAPFLGAYNASKFALEALTDVMRMELRPWGISVSIIEPGAIATPIWDKSLTQSDMAQQNLPQWAENLYGHAMNAVRKKVGILASKGISPNIVAQAVVHALTAKKPHTRY----LVGQDAKIAAVLKHILPDKLHDRLI 279          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: OAI45180.1 (retinol dehydrogenase [Nitrospira sp. SCGC AG-212-E16])

HSP 1 Score: 193.7 bits (491), Expect = 1.000e-45
Identity = 131/308 (42.53%), Postives = 177/308 (57.47%), Query Frame = 0
Query:   47 SNVTLGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGG-VLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASD----PVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +NV++  +VVTGASTGIG   AL  A RG  VFAGVR P  GEAL                   T KGG  L P+ LDVT    I  ++  V+  +   G     GLVNNAG+  G+ P+E +PL   R   E+N  G +AVT+AFLPLLR+  +GRIVN+ S+AG  T PL   YS +K+ALEAL+D LRMEL   G+ VS+I+PG I + I+ K+ ++ +     + EE   LYG   A+ ++   + KA+     P    +A+HHALT+A P TRY    + G  A L +W +  L DR+ DRV+
Sbjct:    4 TNVSM-AVVVTGASTGIGAACALDCAGRGMTVFAGVRDPRAGEAL-------------------TEKGGRSLIPITLDVTDELSIMRSVEVVQRVVGEGG---LGGLVNNAGIVIGS-PLEVIPLPQLRKQLEINVIGQIAVTQAFLPLLRR-GRGRIVNMGSIAGRGTIPLLGPYSASKYALEALTDALRMELQPWGIQVSIIEPGAIATPIWEKSAKEAEDLEASVSEEAKALYGE--AVIRIREAITKAAQRAIPPDAVVRAVHHALTAARPHTRY----LVGADAKLRAWMVKWLPDRVQDRVL 280          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: WP_067072733.1 (SDR family NAD(P)-dependent oxidoreductase [Mycobacterium sp. 1482268.1] >OBA95945.1 hypothetical protein A5662_18465 [Mycobacterium sp. 1482268.1])

HSP 1 Score: 193.0 bits (489), Expect = 1.800e-45
Identity = 131/298 (43.96%), Postives = 170/298 (57.05%), Query Frame = 0
Query:   54 IVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLY-GHLYAL-KKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            +V+TGAS+GIGR  AL L +RGF VFAGVR   DG AL              Q +A+ +    L P+ +DVT  A I A  + V E++   GN    GLVNNAG T    PV+YLPL   R   EVN  GPLAVT+A LPLL +   GRIVNV+S AG +  PL A Y   K  LE L+D LR+ELG LG+ V+ I+PG++ + + GK     D+ +  LP++    Y G L AL + +    A+ SDP V +  + HALTSA PRTRY      G  A  L     +++DR  DR+I
Sbjct:    4 VVITGASSGIGRATALTLDRRGFRVFAGVRTDVDGGAL--------------QQAASAA----LTPVFIDVTDEASIAAMTKLVAEDV---GNAGLAGLVNNAGTTLPC-PVQYLPLQAFRRQLEVNLVGPLAVTQALLPLLLR-GHGRIVNVTSAAGKLGVPLMAPYVAAKHGLEGLTDVLRLELGPLGIHVAAIEPGFVATAMGGKLKRDVDETIGSLPDQGRTRYGGQLTALAESISTHAAQGSDPGVVADGVVHALTSAKPRTRYPV----GAGAKRLLTMRRLVSDRRFDRII 274          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: XP_005854162.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU22195.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EWM23126.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 192.6 bits (488), Expect = 2.300e-45
Identity = 133/344 (38.66%), Postives = 181/344 (52.62%), Query Frame = 0
Query:   12 GVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVTLGGIVVTGASTGIGRHAALYLAQR--GFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMEL-GHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLY------ALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLD 347
            G +LA  +  V+  ++PF +  ++RK +P         T G I+VTGASTGIG HAA++LA       V+AGVRK  D E +   H                     L PL +D T  + + AA+  +        +LP +GL+NNAGV+  + P+E+LP+   R   E N  GP  +T+  +P LR   QGR+V +SS+ G VT      Y  +K A EALSD LR+EL G  GVSVSV++P Y+ +EIFGK  ++ +     L  E   LYG  +      A KK    +AK   PVV S AI HAL + YP+TRY   N  G  A L  +  W+L DRL D
Sbjct:    3 GGILAFALWGVIFALVPFAVEFLTRKSFPV-------HTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSN------------------LLPLHIDTTDQSSMDAAVAFLHST-----SLPIIGLINNAGVSTNS-PIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRAS-QGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETL---LSPELRSLYGPFFYREDQAARKKAQ--IAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLAD 309          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: PLY28502.1 (short-chain dehydrogenase/reductase [Nitrospira sp. CG24C])

HSP 1 Score: 192.2 bits (487), Expect = 3.000e-45
Identity = 127/299 (42.47%), Postives = 175/299 (58.53%), Query Frame = 0
Query:   56 VTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGG-VLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASD----PVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            VTGASTGIG   AL  A RG  VFAGVR P  GEAL                    +KGG  L P+ LDVT    I  ++  V+  L ++G     GLVNNAG+  G+ P+E +PL + R   EVN  G +AVT+AFLPLLR+  +GRIVN+ S+AG  T PL   YS +K+ALEAL+D LRMEL   G+ VS+I+PG I + I+ K+ ++ +     +  E   LYG   A+ ++   +A+A+     P    +A+HHALT++ PRTRY    + G+ A L +W +  L DR+ DR++
Sbjct:   29 VTGASTGIGAACALDCASRGMTVFAGVRDPRAGEAL-------------------AAKGGPSLIPITLDVTDEPSIARSVEAVQLVLGKKG---LGGLVNNAGIVVGS-PLEVIPLSHLRKQLEVNVIGQIAVTQAFLPLLRR-GRGRIVNMGSIAGRGTIPLLGPYSASKYALEALTDALRMELQPWGIQVSIIEPGAIATPIWEKSAKEAEGLEASVSAEAKALYGE--AVIRIREAIAQAAQRAIAPDAVVRAVHHALTASRPRTRY----LVGSDAKLRAWMVKWLPDRMQDRLL 297          
BLAST of NO01G00500 vs. NCBI_GenBank
Match: WP_027892312.1 (SDR family NAD(P)-dependent oxidoreductase [Meiothermus chliarophilus])

HSP 1 Score: 191.0 bits (484), Expect = 6.700e-45
Identity = 125/297 (42.09%), Postives = 166/297 (55.89%), Query Frame = 0
Query:   55 VVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKKDHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFLGLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQGRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQPGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLY--ALKKVDNLVAKASDPVVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVI 350
            ++TGASTGIG   AL+LA +G  V+AGVR+  DGE L                       G+LHP++LDVT    I  A  TV+    R       GLVNNAG+   A P+E+LPL+  R   EVN  G +AV + FL LLR E +GR+VN+SS++G V  PL   YS +KFALEALSD LR EL   G+ V V++PG I + I+GK      + +++LP E   LYG      ++ V+ +  K   P+  +KA+ HALT+  PRTRY    V G  A    +    L DRLLD +I
Sbjct:    5 LITGASTGIGECCALHLAGKGHTVWAGVRRLEDGERL------------------ARQATGLLHPVLLDVTDTQSIARAAETVRAHTPRLD-----GLVNNAGI-AMAGPLEFLPLEELRRQLEVNVVGQVAVLQGFLGLLR-EGRGRVVNMSSISGRVAAPLFGPYSSSKFALEALSDALRRELKPWGMEVCVVEPGNIQTPIWGKGVNWGRELLEKLPPEARALYGKAIDGLIRYVEGIDGKGLPPLEVAKAVEHALTAPRPRTRY----VVGRDAKAGIFFARFLPDRLLDEMI 272          
The following BLAST results are available for this feature:
BLAST of NO01G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855521.17.200e-4740.921-acylglycerone phosphate reductase, partial [Nann... [more]
XP_005855590.13.600e-4638.69short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM24343.13.600e-4638.69short-chain dehydrogenase reductase sdr [Nannochlo... [more]
PLY20528.16.100e-4641.80short-chain dehydrogenase/reductase [Nitrospira sp... [more]
WP_017318177.11.000e-4542.62SDR family NAD(P)-dependent oxidoreductase [Mastig... [more]
OAI45180.11.000e-4542.53retinol dehydrogenase [Nitrospira sp. SCGC AG-212-... [more]
WP_067072733.11.800e-4543.96SDR family NAD(P)-dependent oxidoreductase [Mycoba... [more]
XP_005854162.12.300e-4538.66short-chain dehydrogenase reductase sdr [Nannochlo... [more]
PLY28502.13.000e-4542.47short-chain dehydrogenase/reductase [Nitrospira sp... [more]
WP_027892312.16.700e-4542.09SDR family NAD(P)-dependent oxidoreductase [Meioth... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008336NSK008336Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00500.1NO01G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668148gene_27Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100556g1gene1636Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00500.1NO01G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00500 ID=NO01G00500|Name=NO01G00500|organism=Nannochloropsis oceanica|type=gene|length=1436bp
ATGGCCATGCCACTAGTTCTCACCCTCTTCTTCGGGGTACTCCTGGCCGT
GGGTATCGCATTGGTGGTCCTCCTCATCCTCCCATTCGTCATCTATCTCA
TAAGCCGCAAGCGCTACCCCACCCTTCCTTCTCAGGCGTCTAATGTCACG
CTGGGCGGCATAGTGGTCACCGGTGCCTCGACAGGTATAGGAAGACATGC
AGCCTTGTACCTGGCCCAACGAGGGTTTATTGTCTTTGCCGGCGTGCGCA
AGCCTGCAGATGGAGAGGCACTCCTACTTGCACATCAACAAGAGAAAAAA
GATCATTCGACGAGCCAAACATCAGCCACAACGAGCAAAGGAGGTGTCCT
CCACCCACTCATCCTCGACGTGACCAAAGCTGCCCAAATCACTGCTGCCT
TGCGCACTGTAAAAGAGGAGCTGGCCCGCCGAGGTAATTTGCCGTTTCTG
GGACTTGTAAATAACGCAGGAGTAACTGGTGGGGCAGATCCCGTTGAGTA
CTTGCCGCTGGACTACAACAGATATGCGTTCGAAGTTAATTACCACGGGC
CTCTGGCAGTAACGAAAGCGTTTCTCCCTCTCCTCCGCCAAGAGCCCCAA
GGGCGGATTGTAAACGTGTCCAGCATGGCTGGGACGGTCACTCGTCCCTT
AGGCGCTACCTATTCCTGCACCAAATTCGCCTTGGAAGCCCTGAGTGATA
CTCTGCGGATGGAGCTCGGGCACCTAGGGGTCTCAGTCTCGGTGATTCAA
CCGGGCTATATCCACAGCGAGATATTTGGGAAAGCCACAGAGCAGCATGA
CCAGCGGATGCAAGAGCTGCCGGAGGAATGTGCGATGCTGTACGGCCATT
TGTATGCGCTCAAGAAGGTGGATAATTTGGTCGCTAAGGCCTCTGACCCA
GTTGTATGCTCGAAGGCCATCCACCATGCCTTGACCAGCGCGTACCCCCG
Ggtatgattttgagggaaaggaagggaagggagggggagcaagcgaaatg
ggtgtcgatcattaagtggctgaaactgttgtgcaacccatcccattttt
gattttggggtgggtttgattcgattcttccttttcatggatgtccgttt
gcctcgcctaccgtataaatacagcagtcactcaaagagagtgacccttc
acgaaaactcacccgctctcttcctcctttcccccaccttcccgccttcc
ttcattcattccctgtataaaagACGAGATACCAGCCGGGAAACGTGAAT
GGCACGCCTGCATCCTTATTAAGCTGGGGAATTTGGATATTGAACGACCG
ATTGCTGGATAGGGTGATAACACCGAGCCCGGCACAGAAAGGGGATGTCC
AGATTGGTGTAGTGAAGAGAGACGGGGAGGACAAGGAGGAGGGAGGGGTG
GAAGAGGGGAGGGAAGGGGGAAATGCGACGCAGTGA
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protein sequence of NO01G00500.1

>NO01G00500.1-protein ID=NO01G00500.1-protein|Name=NO01G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MAMPLVLTLFFGVLLAVGIALVVLLILPFVIYLISRKRYPTLPSQASNVT
LGGIVVTGASTGIGRHAALYLAQRGFIVFAGVRKPADGEALLLAHQQEKK
DHSTSQTSATTSKGGVLHPLILDVTKAAQITAALRTVKEELARRGNLPFL
GLVNNAGVTGGADPVEYLPLDYNRYAFEVNYHGPLAVTKAFLPLLRQEPQ
GRIVNVSSMAGTVTRPLGATYSCTKFALEALSDTLRMELGHLGVSVSVIQ
PGYIHSEIFGKATEQHDQRMQELPEECAMLYGHLYALKKVDNLVAKASDP
VVCSKAIHHALTSAYPRTRYQPGNVNGTPASLLSWGIWILNDRLLDRVIT
PSPAQKGDVQIGVVKRDGEDKEEGGVEEGREGGNATQ*
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Synonyms
Publications