NO01G00240, NO01G00240 (gene) Nannochloropsis oceanica

Overview
NameNO01G00240
Unique NameNO01G00240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length974
Alignment locationchr1:39764..40737 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:39764..40737 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO01G00240 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 112.1 bits (279), Expect = 2.000e-21
Identity = 79/194 (40.72%), Postives = 107/194 (55.15%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCRE--KGGARTTKLFC 192
            M RA  LLALGITL +TA Q + TL ++K +D +   +DQWSMKG L+DP    V  I  EGL V+L +         + +    FAA+DC+   NGRGV CK  GAR+S K ++R P  A V+   N+N T     YYS SG+FRR QF ++ I     +     +        +S+C E  KG  RTT++ C
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMAL------ATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ-NSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITC 183          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 111.7 bits (278), Expect = 2.600e-21
Identity = 77/192 (40.10%), Postives = 109/192 (56.77%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCREKGGARTTKLFC 192
            M R LSLLALG+TL +TA Q   TL ++K  + +   +DQWSMKG L++P  + V  I   GL V+L +   D       ++   FAA +C+ L NGRGV CK  GAR+S K+T+R P  AKVK+    + ++S   YY  SG+FRR QF ++ +     +     +T L A  +  + R KG  R TK+ C
Sbjct:    1 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLD------PLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKVKS----SNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITC 180          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 111.3 bits (277), Expect = 3.400e-21
Identity = 79/194 (40.72%), Postives = 107/194 (55.15%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCRE--KGGARTTKLFC 192
            M RA  LLALGITL +TA Q + TL ++K +D +   +DQWSMKG L+DP    V  I  EGL V+L +         + +    FAA+DC+   NGRGV CK  GAR+S K ++R P  A V+   N+N T     YYS SG+FRR QF ++ I     +     +        +S+C E  KG  RTT++ C
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMAL------ATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ-NSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITC 202          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 105.1 bits (261), Expect = 2.400e-19
Identity = 77/192 (40.10%), Postives = 104/192 (54.17%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCREKGGARTTKLFC 192
            M   LSLLALGITL +TA Q   TL +IK        +DQWSMKG L++P  + V  I   GL V+L +         S ++   FAA +C+ L N RGV CK  GAR+  K+T+R P  AKVK+    +  +S   YY+ SG+FRR QF ++T+     +     TT L A  +  + R K   R TK+ C
Sbjct:    1 MRCILSLLALGITLVMTAGQE-FTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASL------SPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKVKS----SSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTTTLPAIVSTCSERTKSAGRITKITC 180          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 102.8 bits (255), Expect = 1.200e-18
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCREK 182
            M R LSLLALG+TL +TA Q   TL ++K  + +   +DQWSMKG L++P  + V  I   GL V+L +   D       ++   FAA +C+ L NGRGV CK  GAR+S K+T+R P  AKVK+    + ++S   YY  SG+FRR QF ++ +     +     +T L A   +S C E+
Sbjct:   37 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLD------PLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKVKS----SNSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKVGSTTLPA--IVSTCSER 204          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 101.7 bits (252), Expect = 2.700e-18
Identity = 85/192 (44.27%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLTAATSTTQLGA-EDTLSNCREKGGARTTKLFC 192
            M R LSLLALG+TLALT  Q ML+L SIK  + T  NKD+WSMKG L DP    VS I   GL V L     D  DD  D +   FAA DC    N +G  CK  GAR+S + +K  P   KVK        +S   YYSVSG FR  Q +     S  LTA  +   +G    TL++C  + GA TT+  C
Sbjct:   68 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTL----LDTADDTLDTA--SFAAGDCMVRKNSKGAKCKMMGARVSIRASK-PPKGVKVKTY------NSTGGYYSVSGSFRGVQLQEDPVISP-LTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTC 243          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 100.9 bits (250), Expect = 4.500e-18
Identity = 84/192 (43.75%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLTAATSTTQLGA-EDTLSNCREKGGARTTKLFC 192
            M R LSLLALG+TLALT  Q ML+L SIK  + T  NKD+WSMK  L DP    VS I   GL V L     D  DD  D +   FAA DC    N +G  CK  GAR+S + +K  P +      K+HN T     YYSVSG FRR Q +    +   LTA  +   +G    TL+ C  K G +T K+ C
Sbjct:   80 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTL----LDTADDTLDTAT--FAAGDCMVRKNSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYYSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 254          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 100.9 bits (250), Expect = 4.500e-18
Identity = 84/192 (43.75%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLTAATSTTQLGA-EDTLSNCREKGGARTTKLFC 192
            M R LSLLALG+TLALT  Q ML+L SIK  + T  NKD+WSMK  L DP    VS I   GL V L     D  DD  D +   FAA DC    N +G  CK  GAR+S + +K  P +      K+HN T     YYSVSG FRR Q +    +   LTA  +   +G    TL+ C  K G +T K+ C
Sbjct:   11 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTL----LDTADDTLDTAT--FAAGDCMVRKNSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYYSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 185          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana])

HSP 1 Score: 100.5 bits (249), Expect = 5.900e-18
Identity = 83/200 (41.50%), Postives = 109/200 (54.50%), Query Frame = 0
Query:    1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNCRE--KGGARTTKLFCQ 193
            M   LSLLALGITL    +T A   L L SI+AVD +  NKD W MKG +NDP   FV  I   GL V+L +   D       ++ V FAA+DCR  ++GR   CK  GAR+S K+++R     K+K  K  H K+ +S   YYSV+G FR   F EN + +   LTAA         DTL +C +  +  AR+T   C+
Sbjct:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATD------PLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR----PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALRVNGSVLSDTLISCYDLARKSARSTISQCE 188          
BLAST of NO01G00240 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana])

HSP 1 Score: 100.1 bits (248), Expect = 7.700e-18
Identity = 78/184 (42.39%), Postives = 101/184 (54.89%), Query Frame = 0
Query:    1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDPDADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGVLCKDAGARISFKKTKRVP--HEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLTAATSTTQLGAEDTLSNC 179
            M   LSLLALGITL    +T     L L SI+AVD +  NKD W MKG +NDP    V TI  +GL V+L +   D+      ++ V FAA DCR  ++G+   CK  GAR+ F KT R P  +  K    K +N T     YYSV+G FRR  F EN + +   LTAA +  +    DTL++C
Sbjct:   69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDL------LNTVTFAARDCRVPAHGKRAACKIRGARV-FIKTSRRPKINTPKTVHAKRYNST---GGYYSVTGTFRRLTFLENPVVSP--LTAALTVNESVLSDTLTSC 240          
The following BLAST results are available for this feature:
BLAST of NO01G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
XP_005855033.12.000e-2140.72hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM30045.12.600e-2140.10hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM30036.13.400e-2140.72hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
EWM20135.12.400e-1940.10hypothetical protein Naga_101626g1, partial [Nanno... [more]
EWM20105.11.200e-1840.11hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM22005.12.700e-1844.27hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
EWM22002.14.500e-1843.75hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.14.500e-1843.75hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM20521.15.900e-1841.50hypothetical protein Naga_100335g8, partial [Nanno... [more]
EWM27397.17.700e-1842.39hypothetical protein Naga_101181g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL007nonsL007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR042ncniR042Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00240.1NO01G00240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00240.1NO01G00240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00240 ID=NO01G00240|Name=NO01G00240|organism=Nannochloropsis oceanica|type=gene|length=974bp
ATGCATCGCGCCCTTTCTCTGCTTGCCCTCGGCATCACCCTCGCCCTGAC
GGCGGCTCAGCCGATGTTGACCCTCACCTCCATTAAGGCAGTCGACTCGA
CTAGCGACAACAAGGATCAATGGAGCATGAAGGGCTTCCTCAACGATCCT
GATGCCGATTTCGTCTCTACCATCGCCGATGAGGGCTTGTTTGTAGACTT
GTACAACGATGAGTTTGACATCAATGATGACGACAGTGACGTGAGTGTGG
TGGAATTTGCCGCGGCTGATTGTAGAGACCTCAGCAACGGCAGGGGAGTC
CTTTGCAAGGATGCGGGCGCCCGTATCTCGTTCAAGAAGACGAAGAGGGT
ACCGCATGAGGCCAAGGTGAAGGCGATGAAGAACCACAACAAGACGGACA
GCGCTTCTTCCTACTACAGTGTGTCGGGTGTTTTCCGCCGTCAGCAATTC
GAGAACACTATCTCTAACTCAGCGAATCTGACAGCTGCTACTTCTACTAC
CCAGCTAGGTGCTGAAGACACACTCTCTAACTGCAGGGAGAAGGGGGGTG
CCAGGACCACCAAGCTCTTCTGCCAGTAAATGCCATCGCATTGAGGTCGG
GCCTGCACTCGGCGCTCGACTCACCGGCAAGAGACCCTCCACGTCCTGCC
TCTTGTATATCTATGTGTGACTGTGTCTTGTATGCCCGCTCAGGTTGGAA
GCCCTCCAGTTTCCGTTCCTGACGCGTCGGTTTGTCCATGTGCGTAAACA
GTGTTCTTGTTTGATGTGTTGTGCATGTGTTGTGCTGTGTATGTGTCCCA
TCTCCTCTCTCGAGCCCTTCTCGTGTTGTATGCTTGTATTCCCCGGACGG
CCCCAGAGAGCCAAGTCTCGGAGTTTGATCTTTGGTGCCTGAAGTTCAAC
TCTGTCAATATTCCAAAAGAAGGACAGGCCTTTCGCAGGCGATTATTTGC
GAAATAAAATCTGCTTATAAAATG
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protein sequence of NO01G00240.1

>NO01G00240.1-protein ID=NO01G00240.1-protein|Name=NO01G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bp
MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSDNKDQWSMKGFLNDP
DADFVSTIADEGLFVDLYNDEFDINDDDSDVSVVEFAAADCRDLSNGRGV
LCKDAGARISFKKTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF
ENTISNSANLTAATSTTQLGAEDTLSNCREKGGARTTKLFCQ*
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Synonyms
Publications