NO01G00170, NO01G00170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00170 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 95.1 bits (235), Expect = 2.800e-16 Identity = 76/189 (40.21%), Postives = 99/189 (52.38%), Query Frame = 0 Query: 1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKG--------VPGP 182 M R LSLLALG+TLALT Q ML+L SIK + T N+DKWSMKG L DP ++S I GL+ L++ + +FAA C + +G CK GAR+S + +K P + K+HN T Y+SVSG FRR Q + + L+ L T TL+ C KG VPGP Sbjct: 1 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYFSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGP 179
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 91.3 bits (225), Expect = 4.100e-15 Identity = 76/213 (35.68%), Postives = 112/213 (52.58%), Query Frame = 0 Query: 1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTI----SNSANLSGSLGNNQAF--------TDEPTLSNCRKKGVPGPPSSSASKCHRIEVG 196 M LSLLALGITL +T A L L SI+AVD + N+D W MKG +NDP + I GL+ +L ++ ++ V FAA+ CR ++GR CK GAR+S KR++R K+K K H K+ +S YYSV+G FR F EN + + + ++GS+ ++ + T+S C PGPP + + + + G Sbjct: 1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR----PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGSVLSDTLISCYDLARKSARSTISQCE----PGPPVPTPTWTEQTDAG 205
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 89.0 bits (219), Expect = 2.000e-14 Identity = 77/212 (36.32%), Postives = 111/212 (52.36%), Query Frame = 0 Query: 1 MHRALSLLALGITLALT---AAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC----RKKG-------VPGPPSSSASKCHRIEVG 196 M ALSLL LG+T T A L L SI+ VD + N+D W MKG +NDP ++ I GL+ +L ++ ++ V FAA+ CR ++GR CK GAR+S K ++R KVK K H K+ +S YYSV+G FR F EN + + L+ +L N + + TL++C RK G PGPP+ + + + G Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRR----PKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALRINGSVLSD-TLTSCYDLARKSGRNTISHCEPGPPAPTPTWTEQTTAG 205
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM26485.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 89.0 bits (219), Expect = 2.000e-14 Identity = 77/212 (36.32%), Postives = 111/212 (52.36%), Query Frame = 0 Query: 1 MHRALSLLALGITLALT---AAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC----RKKG-------VPGPPSSSASKCHRIEVG 196 M ALSLL LG+T T A L L SI+ VD + N+D W MKG +NDP ++ I GL+ +L ++ ++ V FAA+ CR ++GR CK GAR+S K ++R KVK K H K+ +S YYSV+G FR F EN + + L+ +L N + + TL++C RK G PGPP+ + + + G Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRR----PKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALRINGSVLSD-TLTSCYDLARKSGRNTISHCEPGPPAPTPTWTEQTTAG 205
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 83.2 bits (204), Expect = 1.100e-12 Identity = 73/198 (36.87%), Postives = 99/198 (50.00%), Query Frame = 0 Query: 1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNC----RKKG-------VPGPP 183 M A S LA+GIT +T A L L SI+AVD + N+D W MKG ++DP ++ IA GL +L + ++ VTFAA+ CR +NGR CK GAR+S K ++R K+K K H KT +S YY V+G R F + S + N +D TL++C R G PGPP Sbjct: 1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRR----PKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNGDVLSD--TLTSCYDLPRMNGRNTITHCEPGPP 192 The following BLAST results are available for this feature:
BLAST of NO01G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00170 ID=NO01G00170|Name=NO01G00170|organism=Nannochloropsis oceanica|type=gene|length=654bpback to top protein sequence of NO01G00170.1 >NO01G00170.1-protein ID=NO01G00170.1-protein|Name=NO01G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=218bpback to top Synonyms
Publications
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