NO23G01390, NO23G01390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01390 vs. NCBI_GenBank
Match: EWM22910.1 (hypothetical protein Naga_101154g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 99.8 bits (247), Expect = 2.500e-17 Identity = 54/104 (51.92%), Postives = 66/104 (63.46%), Query Frame = 0 Query: 8 TVVFVLLASIGSFLFG------LLNDLDVFKPLPAPS--LGGETRGXXXXXXXXXGFVCRTLARETAIGAEDIITITPSILLAGTDDRLRLWENARFGPAKTPQ 104 T +F++ S+ FL G L+ DLDV KP P PS L E G GF+CRTL RE+ IGAEDI+T+TPS+ + GTDDRLRLWEN FGP +TPQ Sbjct: 2 TRIFMVTISLVQFLLGSLFLVMLMYDLDVLKPSPRPSERLYSED-GEVHFVPTPSGFICRTLGRESIIGAEDIVTLTPSLFITGTDDRLRLWENPDFGPTRTPQ 104
BLAST of NO23G01390 vs. NCBI_GenBank
Match: OEU10258.1 (hypothetical protein FRACYDRAFT_247873 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 97.8 bits (242), Expect = 9.600e-17 Identity = 73/250 (29.20%), Postives = 114/250 (45.60%), Query Frame = 0 Query: 128 ITIEPVPLVNFPEGIAFHPHGMYYHRETSKLFVINHAYEKGGERIDVFHLPFTTITSSRSRSSRRMRLVHARWLYVLAPPIFQAECMGTLNDLVVLHSLPAAAAGGKEGGREPRREDELYVTHYRAFPDAAAGRLVPGNILAGVHDLLNFFSIVSRRRWTRVLYCK---------------GNV-CRPTEINGKQGGGVLFNGINVSPDRKRLLVADMKSVQVLEIDPSLPLSLHRLAHLPTPHLVDNIE 362 + +E +P++N+PE I FHPHG+Y +E L+V+NHAYEKGGERIDVF TI + + + Y + + E G +N +VV+ E++ Y+T Y A P + + GV L N ++ T V YC+ N+ CR ++ G+ G NGI + D ++ V+ KS+ V + D S +L R + P++VDNI+ Sbjct: 131 LKVEKLPIINYPEKINFHPHGIYIRKEDRTLYVVNHAYEKGGERIDVF-----TIITDDDIDIDDDIPIRLDYKYSITSDWMKKELNGIINSIVVV------------------EENKFYITQYEAEPHKPSPFKLSSEFKKGVTLLRNL--LLGPDANTHVFYCEYTPLSSSASSSSALTDNLDCR--KVAGQFEGA---NGITHNADYSKIFVSSWKSITVFDRD-STTNNLARRITIHVPNVVDNIK 349
BLAST of NO23G01390 vs. NCBI_GenBank
Match: KRX03364.1 (hypothetical protein PPERSA_12643 [Pseudocohnilembus persalinus]) HSP 1 Score: 88.2 bits (217), Expect = 7.600e-14 Identity = 82/315 (26.03%), Postives = 129/315 (40.95%), Query Frame = 0 Query: 58 CRTLARETAIGAEDIITITPSILLAGTDDRLRLWENARFGPAKTPQGGLLAIYXXXXXXXXXXXXXGEEGITIEPVPLVNFPEGIAFHPHGMYYHRETSKLFVINHAYEKGGERIDVFHLPFTTITSSRSRSSRRMRLVHARWLYVLAPPIFQAECMGTLNDLVVLHSLPAAAAGGKEGGREPRREDELYVTHYRAFPDAAAGRLVPGNILAGVHDLLNFFSIVSRRRWTRVLYC--KGNVCRPTEINGK----QGG-GVLFNGINVSPDRKRLLVADMKSVQV----LEIDPSLPLSLHRLAHLPTPHLVDNIE 362 C+ + + GAEDI I+ + + G D R LWE + GP P GG+ I E + + NFP+ FHPHG+YY+ E+ L VINH Y+ RI+ F L + + + R + + + E G +ND + + +DE VT Y + PD GR + L + L I+ + T VL+C K E+ + +G G + NGI + K ++VAD ++ L+ D + L +P+ +L+DNIE Sbjct: 41 CQYIKGFSGGGAEDITKISENFAVTGGDKRHELWEK-KNGPENVPNGGIFLI--------------DLEMDNVYQFKIRNFPQNRKFHPHGIYYNHESKILSVINHGYDGIPSRIEQFKLDVSNVKEPVANHIRSL--------------VVETEHNGVINDNIQI------------------SDDEYIVTQYLSQPDPLKGR--QNHTL--LQKLKGSLKILFNLKSTFVLHCSFKSQYKLEKEVQMECQRIEGTYGTMMNGITWDRN-KEVVVADTVDKKLYFYQLQQDKAKNQILQLKKIIPSSYLIDNIE 303
BLAST of NO23G01390 vs. NCBI_GenBank
Match: XP_002788687.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER20483.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 86.7 bits (213), Expect = 2.200e-13 Identity = 74/233 (31.76%), Postives = 106/233 (45.49%), Query Frame = 0 Query: 133 VPLVNFPEGIAFHPHGMYYHRETSKLFVINHAYEKGGERIDVFHLPFTTITSSRSRSSRRMRLVHARWLYVLAPPIFQAECMGTLNDLVVLHSLPAAAAGGKEGGREPRREDELYVTHYRAFP---DAAAGRLVPGNILAGVHDLLNFFSIVSRRRWTRVLYCKGNVCRPTEINGKQGGGVLFNGINVSPDRKRLLVADM--KSVQVLEIDPSLPLSLHRLAHLPTPHLVDNI 361 +PL FP GI+F PHG+ YHRET+ L V+NHA+ GGER++ F + F R + L++ + V +P + G LND+ +L EPR + Y T + P D L G LA + LN +IV YC G CR T G + G +NGI +S DR +L M + + +I P L + + H+ T +DNI Sbjct: 129 LPLEGFPIGISFRPHGISYHRETATLGVVNHAWASGGERVEFFRVRF--------EGQRPVALLYMK--SVTSPEMGH----GQLNDMQILEV-------------EPR--VKFYATKWWGHPLGDDKGPNMLAKGRFLADLILGLNSCTIV---------YCDGEKCRDT--GGARPG---YNGIYISHDRSKLAAVVMGDHGLNLYDILPDGDLRI--IGHVHTGMPLDNI 316
BLAST of NO23G01390 vs. NCBI_GenBank
Match: CBN78009.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.3 bits (199), Expect = 9.300e-12 Identity = 45/111 (40.54%), Postives = 58/111 (52.25%), Query Frame = 0 Query: 70 EDIITITPSILLAGTDDRLRLWENARFGPAKTPQGGLLAIYXXXXXXXXXXXXXGEEGITIEPVPLVNFPEGIAFHPHGMYYHRETSKLFVINHAYEKGGERIDVFHLPFT 181 EDII + + +A +D+R R + G P G L AI+ E + FPEG AFHPHGM+Y ET +LFV+NHAY +GGERIDVF + T Sbjct: 69 EDIIPVFEGVFVASSDER-RQFVMQSIGAEAAPWGDLFAIWDVDTPGQDPKSAVLE---------IEGFPEGNAFHPHGMHYRAETGELFVVNHAYSQGGERIDVFKVSET 169
BLAST of NO23G01390 vs. NCBI_GenBank
Match: XP_004030355.1 (paraoxonase 3, putative [Ichthyophthirius multifiliis] >EGR29119.1 paraoxonase 3, putative [Ichthyophthirius multifiliis]) HSP 1 Score: 79.7 bits (195), Expect = 2.700e-11 Identity = 67/275 (24.36%), Postives = 111/275 (40.36%), Query Frame = 0 Query: 64 ETAIGAEDIITITPSILLAGTDDRLRLWENARFGPAKTPQGGLLAIYXXXXXXXXXXXXXGEEGITIE-PVPLVNFPEGIAFHPHGMYYHRETSKLFVINHAY--EKGGERIDVFHLPFTTITSSRSRSSRRMRLVHARWLYVLAPPIFQAECMGTLNDLVVLHSLPAAAAGGKEGGREPRREDELYVTHYRAFPDAAAGRLVPGNILAGVHDLLNFFSIVSRRRWTRVLYC------KGNVCRPTEINGKQGGGVLFNGINVSPDRKRLLVADM 330 E IG ED + + L ++D ++ WE GP KT G + + ++ +T + + L NFP+ I FHPHG+Y+ +E LFVINH Y E G+RI++F + + L++ + +Y F + G LN+L+V + +L VT Y + D GR +L + ++ +T VL C + P K G + NGI ++ + V+D+ Sbjct: 67 ENTIGPEDFAKVDSNSFLFSSNDNIQQWEIG--GPNKTQNGHIYLLKM-------------DKNLTSQYKLKLENFPQTIPFHPHGIYFRQEDQVLFVINHPYIFETPGDRIEIFKF-----------NEQNKTLIYLQSIY------FGQQYNGILNNLIVFD------------------KGKLLVTQYLSTTDPKEGRTGRNKF----RELADIAEVLFELEYTYVLSCLWKEEYNQQIALPQCTVLKNTKGTINNGITWDKEQNIVFVSDI 287
BLAST of NO23G01390 vs. NCBI_GenBank
Match: XP_001452939.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK85542.1 unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 78.2 bits (191), Expect = 7.900e-11 Identity = 72/313 (23.00%), Postives = 127/313 (40.58%), Query Frame = 0 Query: 9 VVFVLLASIGSFLFGLLNDLDVFKPLPAPSLGGETRGXXXXXXXXXGFVCRTLARETAIGAEDIITITPSILLAGTDDRLRLWENARFGPAKTPQGGLLAIYXXXXXXXXXXXXXGEEGITIEPVPLVNFPEGIAFHPHGMYYHRET--SKLFVINHAYEKGGERIDVFHLPFTTITSSRSRSSRRMRLVHARWLYVLAPPIFQAECMGTLNDLVVLHSLPAAAAGGKEGGREPRREDELYVTHYRAFPDAAAGRLVPGNILAGVHDLLNFFSIVSRRRWTRVLYCK----GNVCRPTEINGKQGGGVLFNGI 316 V V+ + + F L +DLDVFKP+ + G C+ L +E G ED+ + ++ G+ + +++ G + Q G+ AI ++ ++ + + NFP+ +A + HG+Y ++ + LFVINHAY GGERI+VF + ++ L + + I + G LNDLVV+ ++ +T Y PD GR G +H L F +++++ T ++ C+ + P G++ NGI Sbjct: 4 VTIVVFGVVLALFFKLASDLDVFKPVTNYNEYGN---------------CKYL-KEDIRGPEDMTQYNSTTIIIGSGNFQKVYAQ---GKPELEQQGIYAI-----------LNSNKKNYSVLQLEVKNFPKDVALYMHGIYVRKQQDGNYLFVINHAYHNGGERIEVFKI------------DEQLVLTYTHSI------IMGEQYTGILNDLVVID------------------DNRFLITTYMPLPDPKQGRSAAG----AMHILQTLFYQLTKQKTTYIMDCRFKKENTLIHPVCKQLPNTSGIMRNGI 246
BLAST of NO23G01390 vs. NCBI_GenBank
Match: XP_012654154.1 (transmembrane protein, putative [Tetrahymena thermophila SB210] >EWS73305.1 transmembrane protein, putative (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 69.3 bits (168), Expect = 3.700e-8 Identity = 36/126 (28.57%), Postives = 63/126 (50.00%), Query Frame = 0 Query: 55 GFVCRTLARE--TAIGAEDIITITPSILLAGTDDRLRLWENARFGPAKTPQGGLLAIYXXXXXXXXXXXXXGEEGITIEPVPLVNFPEGIAFHPHGMYYHRETSKLFVINHAYEKG-GERIDVFHL 178 G+ C+ L ++ G EDI+ + L+ ++D ++WE ++ A L+ Y + I + ++NFP+ + FHPHG Y ++ LFV+NH+Y G G+R++VF L Sbjct: 38 GYSCKLLEKQGVHTKGPEDILIYNSTYLITTSNDNFQMWEVGQYTDALDGAINLVKNY--------------KTNPEIVSLKILNFPKSVRFHPHGAYIRKQDDTLFVVNHSYSSGNGDRVEVFAL 149 The following BLAST results are available for this feature:
BLAST of NO23G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01390 ID=NO23G01390|Name=NO23G01390|organism=Nannochloropsis oceanica|type=gene|length=3577bpback to top protein sequence of NO23G01390.1 >NO23G01390.1-protein ID=NO23G01390.1-protein|Name=NO23G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bpback to top protein sequence of NO23G01390.2 >NO23G01390.2-protein ID=NO23G01390.2-protein|Name=NO23G01390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=485bpback to top protein sequence of NO23G01390.3 >NO23G01390.3-protein ID=NO23G01390.3-protein|Name=NO23G01390.3|organism=Nannochloropsis oceanica|type=polypeptide|length=387bpback to top Synonyms
Publications
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