NO12G01000, NO12G01000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01000 vs. NCBI_GenBank
Match: EWM25936.1 (hypothetical protein Naga_100134g15 [Nannochloropsis gaditana]) HSP 1 Score: 147.1 bits (370), Expect = 1.900e-31 Identity = 76/147 (51.70%), Postives = 103/147 (70.07%), Query Frame = 0 Query: 84 WRKRTEMGKKRMKMLLDEYHASLSERQATFYREVEAVHQAREVDIVPHNMQSYFTSYWQDERGKRPPTVGQSKAIKLHLQRLSEALEENGWTTTEEKIFKQMVLDEKAAIHARLKLKGRSAPPLWGRMTEAQRAEDSRVEALIDWRK 231 WR+ E G++R+ +L+++Y SL+ R+ FY +EA+H+ RE ++P NMQSY +SYWQDE G+ PP + S L+RL+ ALE+ GWT EEKIFK +VL EKAAI ARL L+G+ PL GRMTE R ED +VE ++DWRK Sbjct: 79 WRRCME-GRRRIDLLVEDYQRSLATRRVAFYEMIEALHRDREGHVMPRNMQSY-SSYWQDEMGQCPPRIITSPGYSERLRRLNAALEDGGWTPQEEKIFKALVLKEKAAIQARLGLEGKDI-PLLGRMTETARREDDKVERMLDWRK 222
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_005853533.1 (myb-like dna-binding domain containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU22827.1 myb-like dna-binding domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 116.7 bits (291), Expect = 2.700e-22 Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 0 Query: 456 DGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 D QCRSRWYQT HPHTNRGDW EEEVGRL L E +GP+WVKIAGE+G+GRTRQQVKQM +R++R E Sbjct: 15 DVQCRSRWYQTLHPHTNRGDWSEEEVGRLRALVETHGPNWVKIAGEMGSGRTRQQVKQMHSRLVREE 81
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_010243797.1 (PREDICTED: uncharacterized protein LOC104587774 isoform X1 [Nelumbo nucifera]) HSP 1 Score: 97.4 bits (241), Expect = 1.700e-16 Identity = 94/380 (24.74%), Postives = 152/380 (40.00%), Query Frame = 0 Query: 159 KLHLQRLSEALEENGWTTTE--------EKIFKQMVLDEKAAIHARLKLKGRSAPPLWGRMTEAQRAEDSRVEALIDWRKISEKLRRHHPK--RLRLAPRPVL--------ALLTHWKNKVSVPPTFTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYA-DNWSLVSDHVATRTASQCRHRQNSLLMDKTP----FSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMW 516 K+ L L +L WT E ++ F++M+L + ++ L+ G S A D + ++ D EK+R P RLA VL A ++++ + ++ E ++L +VQ+ + W ++A+ +GTG + QCL YQR SLN AHI WT D+D +L AAV + D+W L++ ++ RT +QC +R L ++ +E KRL +A + P+ W + + T+ QCR RW + P N G W EEE RL+ +G W K+A + RT Q ++ W Sbjct: 313 KVVLSMLPHSLNRQPWTNVEKENIRKGIKQQFQEMLLQKSMELYGDLEGSGDS------------NAFDESIASITDLEITPEKIRSFLPNVDWERLASMYVLGHSGAECEARWLNFEDPLINHNPWSNNEDKKLLFIVQQSGLYNWIDIARELGTGRTPFQCLARYQR----------------------SLN-------AHIMKRDWTEDDDAQLRAAVETFGEDDWQLIASNLEGRTGTQCSNRWRKTLHPARQRVGRWTADEDKRLKVAVMLFGPKTWMKIAQFVPGRTQV---------------------------QCRERWVNSLDPSLNLGPWTEEEDSRLKAAILQHGYCWSKVAASV-PPRTDNQCRRRW 623
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_010243798.1 (PREDICTED: uncharacterized protein LOC104587774 isoform X2 [Nelumbo nucifera]) HSP 1 Score: 97.4 bits (241), Expect = 1.700e-16 Identity = 94/380 (24.74%), Postives = 152/380 (40.00%), Query Frame = 0 Query: 159 KLHLQRLSEALEENGWTTTE--------EKIFKQMVLDEKAAIHARLKLKGRSAPPLWGRMTEAQRAEDSRVEALIDWRKISEKLRRHHPK--RLRLAPRPVL--------ALLTHWKNKVSVPPTFTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYA-DNWSLVSDHVATRTASQCRHRQNSLLMDKTP----FSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMW 516 K+ L L +L WT E ++ F++M+L + ++ L+ G S A D + ++ D EK+R P RLA VL A ++++ + ++ E ++L +VQ+ + W ++A+ +GTG + QCL YQR SLN AHI WT D+D +L AAV + D+W L++ ++ RT +QC +R L ++ +E KRL +A + P+ W + + T+ QCR RW + P N G W EEE RL+ +G W K+A + RT Q ++ W Sbjct: 68 KVVLSMLPHSLNRQPWTNVEKENIRKGIKQQFQEMLLQKSMELYGDLEGSGDS------------NAFDESIASITDLEITPEKIRSFLPNVDWERLASMYVLGHSGAECEARWLNFEDPLINHNPWSNNEDKKLLFIVQQSGLYNWIDIARELGTGRTPFQCLARYQR----------------------SLN-------AHIMKRDWTEDDDAQLRAAVETFGEDDWQLIASNLEGRTGTQCSNRWRKTLHPARQRVGRWTADEDKRLKVAVMLFGPKTWMKIAQFVPGRTQV---------------------------QCRERWVNSLDPSLNLGPWTEEEDSRLKAAILQHGYCWSKVAASV-PPRTDNQCRRRW 378
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_020150877.1 (uncharacterized protein LOC109736068 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 95.5 bits (236), Expect = 6.500e-16 Identity = 72/260 (27.69%), Postives = 103/260 (39.62%), Query Frame = 0 Query: 267 FTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHRQNSLLMDKTP----FSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 +TA E++RL VQ H W +A +GT + QCL YQR SLN HI WT++ED +L AAV + NW LVS ++ R +QC +R L+ + +S +E KRL+++ K + W + + T+S QC RW P G+W EE +L GP W KIAG + RT + W R+ + E Sbjct: 396 WTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR----------------------SLN-------PHILKRTWTKEEDLQLLAAVQTFGCNWQLVSANLVGRIGNQCSNRYRKTLIPERKRVGRWSEDEDKRLMVSVKLFRSGSWNKIAQFVPGRTQS---------------------------QCSERWRNVLDPDIEHGEWRPEEDSKLLASVHEVGPCWSKIAGAMIPHRTDNMCLRRWKRLCQDE 599
BLAST of NO12G01000 vs. NCBI_GenBank
Match: EMS63752.1 (Myb-like protein L [Triticum urartu]) HSP 1 Score: 95.1 bits (235), Expect = 8.500e-16 Identity = 72/260 (27.69%), Postives = 103/260 (39.62%), Query Frame = 0 Query: 267 FTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHRQNSLLMDKTP----FSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 +TA E++RL VQ H W +A +GT + QCL YQR SLN HI WT++ED +L AAV + NW LVS + R +QC +R L+ + +S +E KRL+++ K + W + + T+S QC RW P + G+W EE +L GP W KIAG + RT + W R+ + E Sbjct: 389 WTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR----------------------SLN-------PHILKRAWTKEEDLQLVAAVQTFGCNWQLVSASLVGRIGNQCSNRWRKTLIPERKRVGRWSEDEDKRLLVSVKFFRSGSWNKIAQFVPGRTQS---------------------------QCSERWRNVLDPDIDHGEWRPEEDSKLLASVHEVGPCWSKIAGAMIPHRTDNMCLRRWKRLCQDE 592
BLAST of NO12G01000 vs. NCBI_GenBank
Match: BAJ99757.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 94.0 bits (232), Expect = 1.900e-15 Identity = 71/260 (27.31%), Postives = 104/260 (40.00%), Query Frame = 0 Query: 267 FTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHRQNSLLMDKTP----FSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 + A E++RL VQ H W +A +GT + QCL YQR SLN HI WT++ED +L AAV + NW LVS ++A R +QC +R L+ + +S +E KRL+++ K + W + + T+S QC RW P + G+W EE +L GP W KIAG + RT + W ++ + E Sbjct: 394 WAACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR----------------------SLN-------PHILKRTWTKEEDLQLIAAVQAFGCNWQLVSANLAGRIGNQCSNRWRKTLIPERKRVGRWSEDEDKRLLVSVKIFRSGSWNKIAQFVPGRTQS---------------------------QCGERWRNVLDPDIDHGEWRPEEDSKLLASVHEVGPCWSKIAGAMIPHRTDNNCLRRWKKLCQNE 597
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_010228413.1 (uncharacterized protein LOC100828457 isoform X1 [Brachypodium distachyon] >XP_014752710.1 uncharacterized protein LOC100828457 isoform X1 [Brachypodium distachyon] >PNT77125.1 hypothetical protein BRADI_1g58087v3 [Brachypodium distachyon]) HSP 1 Score: 92.8 bits (229), Expect = 4.200e-15 Identity = 72/260 (27.69%), Postives = 107/260 (41.15%), Query Frame = 0 Query: 267 FTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHR-QNSLLMDKT---PFSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 +TA E++ L VQ H W +A +GT + QCL YQR SLN HI +WT++ED +L AAV + NW LVS + R +QC +R + +LL ++T +S +E KRL+++ K + W + + T+S QC RW P + G+W EE +L G W KIAG++ RT + W R+ + E Sbjct: 419 WTAHEEKTLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR----------------------SLN-------PHILKRVWTKEEDLQLLAAVETFGCNWQLVSASMDGRIGNQCSNRWRKTLLPERTRVGRWSEDEDKRLMVSVKLFGSGSWIKIAQFVPGRTQS---------------------------QCSERWRNVLDPDIDHGEWRPEEDSKLLASVHQVGACWSKIAGDMIPRRTDNMCLRRWKRLCQDE 622
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_014752711.1 (uncharacterized protein LOC100828457 isoform X2 [Brachypodium distachyon]) HSP 1 Score: 92.8 bits (229), Expect = 4.200e-15 Identity = 72/260 (27.69%), Postives = 107/260 (41.15%), Query Frame = 0 Query: 267 FTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHR-QNSLLMDKT---PFSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 +TA E++ L VQ H W +A +GT + QCL YQR SLN HI +WT++ED +L AAV + NW LVS + R +QC +R + +LL ++T +S +E KRL+++ K + W + + T+S QC RW P + G+W EE +L G W KIAG++ RT + W R+ + E Sbjct: 419 WTAHEEKTLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR----------------------SLN-------PHILKRVWTKEEDLQLLAAVETFGCNWQLVSASMDGRIGNQCSNRWRKTLLPERTRVGRWSEDEDKRLMVSVKLFGSGSWIKIAQFVPGRTQS---------------------------QCSERWRNVLDPDIDHGEWRPEEDSKLLASVHQVGACWSKIAGDMIPRRTDNMCLRRWKRLCQDE 622
BLAST of NO12G01000 vs. NCBI_GenBank
Match: XP_014752712.1 (uncharacterized protein LOC100828457 isoform X3 [Brachypodium distachyon]) HSP 1 Score: 92.8 bits (229), Expect = 4.200e-15 Identity = 72/260 (27.69%), Postives = 107/260 (41.15%), Query Frame = 0 Query: 267 FTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSGIQCLREYQRGXXXXXXXXXXXXXXXXXXITSSLNSLAAASSAHIKHGLWTRDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHR-QNSLLMDKT---PFSREEQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYXXXXXXXXXXXXDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAGEIGTGRTRQQVKQMWARMMRAE 523 +TA E++ L VQ H W +A +GT + QCL YQR SLN HI +WT++ED +L AAV + NW LVS + R +QC +R + +LL ++T +S +E KRL+++ K + W + + T+S QC RW P + G+W EE +L G W KIAG++ RT + W R+ + E Sbjct: 402 WTAHEEKTLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR----------------------SLN-------PHILKRVWTKEEDLQLLAAVETFGCNWQLVSASMDGRIGNQCSNRWRKTLLPERTRVGRWSEDEDKRLMVSVKLFGSGSWIKIAQFVPGRTQS---------------------------QCSERWRNVLDPDIDHGEWRPEEDSKLLASVHQVGACWSKIAGDMIPRRTDNMCLRRWKRLCQDE 605 The following BLAST results are available for this feature:
BLAST of NO12G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01000 ID=NO12G01000|Name=NO12G01000|organism=Nannochloropsis oceanica|type=gene|length=2969bpback to top protein sequence of NO12G01000.2 >NO12G01000.2-protein ID=NO12G01000.2-protein|Name=NO12G01000.2|organism=Nannochloropsis oceanica|type=polypeptide|length=479bpback to top protein sequence of NO12G01000.1 >NO12G01000.1-protein ID=NO12G01000.1-protein|Name=NO12G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=663bpback to top Synonyms
Publications
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