jgi.p|Nanoce1779_2|634421, gene_10877 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|634421
Unique Namegene_10877
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_79:3546..6598 +

Link to JBrowse

Properties
Property NameValue
TranscriptId634507
ProteinId634421
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_79supercontigscaffold_79:3546..6598 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL003ncniL003Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01000NO12G01000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634421mRNA_10877-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634421mRNA_10877Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|634421

>mRNA_10877-protein ID=mRNA_10877-protein|Name=jgi.p|Nanoce1779_2|634421|organism=Nannochloropsis oceanica|type=polypeptide|length=661bp
MTQPVVDGGGNDEDNFPPPPDVNLLDNDGDDDTIVGQQHHPPTLHAGTMP
SNFQHQQHHYHPHHRKETQQQRQDNGPAATLAEWRKRTEMGKKRMKMLLD
EYHASLSERQATFYREVEAVHQAREVDIVPHNMQSYFTSYWQDERGKRPP
TVGQSKAIKLHLQRLSEALEENGWTTTEEKIFKQMVLDEKAAIHARLKLK
GRSAPPLWGRMTEAQRAEDSRVEALIDWRKISEKLRRHHPKRLRLAPRPV
LALLTHWKNKVSVPPTFTAEEKERLRQLVQRHKEHEWEEVAKRMGTGHSG
IQCLREYQRGGGGGGGGEGRGKGRGGGAITSSLNSLAAASSAHIKHGLWT
RDEDGRLAAAVGMYADNWSLVSDHVATRTASQCRHRQNSLLMDKTPFSRE
EQKRLILATKAYAPEVWKAVQEGKQRPTESNLMAHEGGGSGGYWGHIAGH
LPGRTDGQCRSRWYQTFHPHTNRGDWGEEEVGRLERLFEAYGPDWVKIAG
EIGTGRTRQQVKQMWARMMRAEAKQARKREKEAQKGKEKEEKVAKKRKKG
GATEDYEEDQCRGEGRGGGGREVHASGATRSKGERLRKSKLTAAEMATEK
KRKGEQVRERRASGLAKSRKRGRGMRLEEEESDSNDEEGEEGEEEEDKEG
GGGGGRRGGC*
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Synonyms
Publications