Naga_100284g5, gene3621 (gene) Nannochloropsis gaditana

Overview
NameNaga_100284g5
Unique Namegene3621
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1152758..1155195 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100284g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1152758..1155195 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G04570NO07G04570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3758rna3758-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3759rna3759-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3760rna3760-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3758rna3758Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3759rna3759Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3760rna3760Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3758

>rna3758-protein ID=rna3758-protein|Name=rna3758|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTER
YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLV
YQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSK
TRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPP
SLGIIADYVRNSGVSKVKSEIKNVEKRECRMAGRTSDSLSANMRLIAGCE
YDVLRLPACTTCAHCFFSLCTI
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protein sequence of rna3759

>rna3759-protein ID=rna3759-protein|Name=rna3759|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTER
YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLV
YQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSK
TRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPP
SLGIIADYVRNSGVSKVKSEIKNVEKRECRMAGRTSDSLSANMRLIAGCE
YDVLRLPACTTCAHCFFSLCTI
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protein sequence of rna3760

>rna3760-protein ID=rna3760-protein|Name=rna3760|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTER
YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLV
YQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSK
TRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPP
SLGIIADYVRNSGVSKVELAPGEVQLIINSLAYDMKIEPVQNSLVGALPV
RNY
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Synonyms
Publications