Naga_100010g47, gene3364 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g47
Unique Namegene3364
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:538715..540469 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g47
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:538715..540469 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL135ngnoL135Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01860NO07G01860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3491rna3491-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3492rna3492-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3493rna3493-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3491rna3491Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3492rna3492Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3493rna3493Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3491

>rna3491-protein ID=rna3491-protein|Name=rna3491|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEE
QERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKE
RLLFGGVVGSVTGAFFGGREYMLPLCTNKIAQGRINVIAAIEYMKRHMDS
CEADPFCVYLTVCMAYTAWLEILQQ
back to top

protein sequence of rna3492

>rna3492-protein ID=rna3492-protein|Name=rna3492|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp
MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEE
QERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKE
RLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVG
SAAAIFSIFYSSYQGIKYITKVARSECDWGNPATAALCTIPPLLISTAFR
RNVPYAVLLIGMDVISDASSSSPSSGTRTS
back to top

protein sequence of rna3493

>rna3493-protein ID=rna3493-protein|Name=rna3493|organism=Nannochloropsis gaditana|type=polypeptide|length=159bp
MRMLMCVYKQSSAFRWLNSTLQISNRHGGTLNFHSMSQVPWTRIREFKEE
QERKKRHKVESGQEASRSQRDVLQHETRSQGQETEENSFLGRFKGTYFKE
RLLFGGVVGSVTGAFFGGLDAVQGIKKGKAFGVVLNNFQAKVKFSAEHVG
SAAAIFSMA
back to top
Synonyms
Publications