Naga_100002g170, gene1776 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g170
Unique Namegene1776
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:307788..310456 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g170
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:307788..310456 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04400NO04G04400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1858rna1858-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1857rna1857-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1856rna1856-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1855rna1855-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1854rna1854-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1858rna1858Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1857rna1857Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1856rna1856Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1855rna1855Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1854rna1854Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1858

>rna1858-protein ID=rna1858-protein|Name=rna1858|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPS
LMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVY
AWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEI
EMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEV
VHKSEREEPWGRAWLIIQKKILA
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protein sequence of rna1857

>rna1857-protein ID=rna1857-protein|Name=rna1857|organism=Nannochloropsis gaditana|type=polypeptide|length=286bp
MLKKKDLQFVPVHHLVLWKRANGEHGRTSNVSREYSFSVSKPTDPSLHTA
FPSFFFHRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPA
LVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGS
GIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRT
RVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAI
CITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
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protein sequence of rna1856

>rna1856-protein ID=rna1856-protein|Name=rna1856|organism=Nannochloropsis gaditana|type=polypeptide|length=286bp
MLKKKDLQFVPVHHLVLWKRANGEHGRTSNVSREYSFSVSKPTDPSLHTA
FPSFFFHRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPA
LVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGS
GIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRT
RVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAI
CITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
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protein sequence of rna1855

>rna1855-protein ID=rna1855-protein|Name=rna1855|organism=Nannochloropsis gaditana|type=polypeptide|length=286bp
MLKKKDLQFVPVHHLVLWKRANGEHGRTSNVSREYSFSVSKPTDPSLHTA
FPSFFFHRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPA
LVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGS
GIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRT
RVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAI
CITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
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protein sequence of rna1854

>rna1854-protein ID=rna1854-protein|Name=rna1854|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp
MRLSFTFMETAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHD
ISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQI
FTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFA
CDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKAL
PGPKWEVVHKSEREEPWGRAWLIIQKKILA
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Synonyms
Publications