NO04G04400, NO04G04400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04400 vs. NCBI_GenBank
Match: EWM28729.1 (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana]) HSP 1 Score: 284.6 bits (727), Expect = 3.000e-73 Identity = 148/253 (58.50%), Postives = 170/253 (67.19%), Query Frame = 0 Query: 9 NSTLDKGLSLYTALEPFLYPSLNPALVLGQDISHHCPSLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKIVA 262 +S GL+LY+ LEP LYPSLNPALVLG DISHHCPSLMYGELS ETL KAL LIDE L LP GEGS ID+GSGIG Q+F AAC++ WKRC+GVEIYEKRAKLA +AL+RW+ + T VDFAC D++++ +EGFQV+LLVSAAFTD LM+++A LD Q VGT AICITK LP PKWEVVHK EREEPWGRAWLIIQKKI+A Sbjct: 20 SSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDE-LEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-----------------------------------------QSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230
BLAST of NO04G04400 vs. NCBI_GenBank
Match: EWM28730.1 (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana] >EWM28731.1 uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana] >EWM28732.1 uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana]) HSP 1 Score: 284.6 bits (727), Expect = 3.000e-73 Identity = 148/253 (58.50%), Postives = 170/253 (67.19%), Query Frame = 0 Query: 9 NSTLDKGLSLYTALEPFLYPSLNPALVLGQDISHHCPSLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKIVA 262 +S GL+LY+ LEP LYPSLNPALVLG DISHHCPSLMYGELS ETL KAL LIDE L LP GEGS ID+GSGIG Q+F AAC++ WKRC+GVEIYEKRAKLA +AL+RW+ + T VDFAC D++++ +EGFQV+LLVSAAFTD LM+++A LD Q VGT AICITK LP PKWEVVHK EREEPWGRAWLIIQKKI+A Sbjct: 76 SSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDE-LEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-----------------------------------------QSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 286
BLAST of NO04G04400 vs. NCBI_GenBank
Match: EWM28733.1 (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana]) HSP 1 Score: 284.6 bits (727), Expect = 3.000e-73 Identity = 148/253 (58.50%), Postives = 170/253 (67.19%), Query Frame = 0 Query: 9 NSTLDKGLSLYTALEPFLYPSLNPALVLGQDISHHCPSLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKIVA 262 +S GL+LY+ LEP LYPSLNPALVLG DISHHCPSLMYGELS ETL KAL LIDE L LP GEGS ID+GSGIG Q+F AAC++ WKRC+GVEIYEKRAKLA +AL+RW+ + T VDFAC D++++ +EGFQV+LLVSAAFTD LM+++A LD Q VGT AICITK LP PKWEVVHK EREEPWGRAWLIIQKKI+A Sbjct: 13 SSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDE-LEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-----------------------------------------QSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
BLAST of NO04G04400 vs. NCBI_GenBank
Match: XP_005854807.1 (hypothetical protein NGA_2076020 [Nannochloropsis gaditana CCMP526] >XP_005855662.1 hypothetical protein NGA_2076010 [Nannochloropsis gaditana CCMP526] >EKU20699.1 hypothetical protein NGA_2076010 [Nannochloropsis gaditana CCMP526] >EKU21553.1 hypothetical protein NGA_2076020 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 283.5 bits (724), Expect = 6.700e-73 Identity = 148/253 (58.50%), Postives = 170/253 (67.19%), Query Frame = 0 Query: 9 NSTLDKGLSLYTALEPFLYPSLNPALVLGQDISHHCPSLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKIVA 262 +S GL+LY+ LEP LYPSLNPALVLG DISHHCPSLMYGELS ETL KAL LIDE L LP GEGS ID+GSGIG Q+F AAC++ WKRC+GVEIYEKRAKLA +AL+RW+ + T VDFAC D++++ +EGFQV+LLVSAAFTD LM+++A LD Q VGT AICITK LP PKWEVVHK EREEPWGRAWLIIQKKI+A Sbjct: 76 SSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDE-LEALPREGEGSLIDIGSGIGKQIFTAACVYVWKRCIGVEIYEKRAKLAEQALQRWKSK-----------------------------------------QSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 286
BLAST of NO04G04400 vs. NCBI_GenBank
Match: XP_008894629.1 (hypothetical protein PPTG_03698 [Phytophthora parasitica INRA-310] >ETI40932.1 hypothetical protein F443_13770 [Phytophthora parasitica P1569] >ETK81033.1 hypothetical protein L915_13423 [Phytophthora parasitica] >ETL34459.1 hypothetical protein L916_13311 [Phytophthora parasitica] >ETL87729.1 hypothetical protein L917_13130 [Phytophthora parasitica] >ETM40957.1 hypothetical protein L914_13218 [Phytophthora parasitica] >ETN20772.1 hypothetical protein PPTG_03698 [Phytophthora parasitica INRA-310] >ETO69634.1 hypothetical protein F444_13825 [Phytophthora parasitica P1976] >ETP10722.1 hypothetical protein F441_13696 [Phytophthora parasitica CJ01A1] >ETP38880.1 hypothetical protein F442_13620 [Phytophthora parasitica P10297]) HSP 1 Score: 84.0 bits (206), Expect = 7.800e-13 Identity = 57/217 (26.27%), Postives = 98/217 (45.16%), Query Frame = 0 Query: 46 SLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVI---DLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKI 260 SL+YGE+ ET+ L+ G L +G G+F D+GSG G V AA + + +C G+E+ + +A + L RW E++ + V F GD + D+ + ++ S F+D+L++ ++ D VG++ + +TK LPS +W+ +H+E+ WGRA +I+QKK+ Sbjct: 54 SLVYGEIPFETVDAIFQLMRMQFGVLLDKG-GNFYDIGSGCGKVVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRFEILDS---------------------------------------LPATKADVDVGFVKGDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLPSTRWQAMHEEKFHMSWGRATVIVQKKM 229
BLAST of NO04G04400 vs. NCBI_GenBank
Match: CBN73808.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.5 bits (184), Expect = 2.800e-10 Identity = 58/201 (28.86%), Postives = 78/201 (38.81%), Query Frame = 0 Query: 46 SLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWE-----REVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHK 242 +L YGE+S LA + + GGLP + +G F DLG G G VF AA M W RC+G+EI + +AL RWE + VGE ++F CGD L V+ S F D LMK LA G + +T +PSP +EV+ + Sbjct: 98 ALTYGEVSATGFSDILAKVQDSYGGLPEK-DGVFYDLGCGTGKPVFAAATMHPWHRCIGMEILGDLHGICLKALERWEGGLRHKVTVGETKGG-----------------------------------------AAEIEFVCGDFTVLDWSDGDVVFANSTCFGDDLMKKLAQGAAALKEGAIVVTMTDPVPSPAFEVLEE 256
BLAST of NO04G04400 vs. NCBI_GenBank
Match: XP_009535944.1 (hypothetical protein PHYSODRAFT_525142 [Phytophthora sojae] >EGZ09311.1 hypothetical protein PHYSODRAFT_525142 [Phytophthora sojae]) HSP 1 Score: 74.3 bits (181), Expect = 6.200e-10 Identity = 58/229 (25.33%), Postives = 98/229 (42.79%), Query Frame = 0 Query: 46 SLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGV------------QVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVI---DLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKI 260 SL+YGE+ ET+ L+ G L +G G+F D+GSG G QV AA + + +C G+E+ + +A + L RW +++ L + FA D + D+ + ++ S F+D+L++ ++ D VG++ + +TK L S +W+ VH+E+ WGRA +IIQKK+ Sbjct: 54 SLVYGEIPFETVDAIFQLMRTQFGVLLDKG-GNFYDIGSGCGKVVRAGNVLTVEWQVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRYQMLDS---------------------------------------LPATKADLDLGFAKADAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLQSTRWQAVHEEKFHMSWGRATVIIQKKM 241
BLAST of NO04G04400 vs. NCBI_GenBank
Match: OWY96345.1 (hypothetical protein PHMEG_00033409 [Phytophthora megakarya]) HSP 1 Score: 73.9 bits (180), Expect = 8.100e-10 Identity = 57/232 (24.57%), Postives = 95/232 (40.95%), Query Frame = 0 Query: 46 SLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIG------------VQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVE------GFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKI 260 SL+YGE+ ET+ L+ G L +G G F D+GSG G +V AA + + +C G+E+ + A + L RW E++ E P VD G + V+ ++ S F+D+L++ ++ D VG++ + +TK L S +W+ +H+E+ WGRA +I+QKK+ Sbjct: 53 SLVYGEIPFETVDAIFQLMRTQFGVLLDKG-GRFYDIGSGCGKVVGAGALAVTRYEVMAAALLHDFSKCCGIEVLDGLHAAAMKVLDRWRYEMLDE-------------------------------------------LPATKVDVEVGFAKEDAVKRPDIWRDATLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLQSTRWQAMHEEKFHMSWGRATVIVQKKM 240
BLAST of NO04G04400 vs. NCBI_GenBank
Match: XP_002903642.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55418.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 73.6 bits (179), Expect = 1.100e-9 Identity = 60/231 (25.97%), Postives = 98/231 (42.42%), Query Frame = 0 Query: 46 SLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGV----------QVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVD----FACGDVI---DLGVEGFQVLLLVSAAFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKI 260 SL+YGE+ ET+ L+ G L +G GSF D+GSG G +V AA + + +C GVE+ + +A + L RW E++ P VD F GD + D+ + ++ S F+D+L++ ++ D VG++ + +TK L S +W+ +H+E+ WGRA +I QKK+ Sbjct: 54 SLVYGEIPFETVDAIFQLMRTQFGVLLDKG-GSFYDIGSGCGKVVRVGYWFAGEVMAAALLHDFSKCCGVEVLDGLHAVALKVLDRWRFEMLDS-------------------------------------------LPATKVDVDVGFVKGDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLLSTRWQAMHEEKFHMSWGRATVIFQKKM 239
BLAST of NO04G04400 vs. NCBI_GenBank
Match: GAY02364.1 (Hypothetical protein PINS_010209 [Pythium insidiosum]) HSP 1 Score: 68.6 bits (166), Expect = 3.400e-8 Identity = 55/216 (25.46%), Postives = 91/216 (42.13%), Query Frame = 0 Query: 46 SLMYGELSRETLQKALALIDEDLGGLPPRGEGSFIDLGSGIGVQVFVAACMWGWKRCLGVEIYEKRAKLAREALRRWEREVVGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLAVDFACGDVIDLGVEGFQVLLLVSA-AFTDALMKTLAIALDGQPVGTFAICITKGLPSPKWEVVHKEEREEPWGRAWLIIQKKIV 261 SL+YGE+ ET+ L+ G L RG G+F D+GSG G V AA + +++C G+EI + +A +AL W + + X + V FA GD L + L+ +A F+D+ L G + +TK L S +W+++H+++ WG A ++IQ+K++ Sbjct: 73 SLVYGEICFETVAAVFTLMRNQFGVLLDRG-GNFYDIGSGCGKVVLAAALLHDFQKCCGIEILDGLHAMALKALEHWRYKTL---------------------------------------DXLPVVKSDMDVGFAKGDATKLELWRDATLVFCNATCFSDSPRTQL-------NEGAXXVMVTKPLASKRWKILHEQKFPMSWGSATVVIQRKVL 241 The following BLAST results are available for this feature:
BLAST of NO04G04400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04400 ID=NO04G04400|Name=NO04G04400|organism=Nannochloropsis oceanica|type=gene|length=2091bpback to top protein sequence of NO04G04400.1 >NO04G04400.1-protein ID=NO04G04400.1-protein|Name=NO04G04400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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