Naga_100402g6, gene1758 (gene) Nannochloropsis gaditana

Overview
NameNaga_100402g6
Unique Namegene1758
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:250921..254219 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100402g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:250921..254219 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04600NO04G04600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1832rna1832-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1831rna1831-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1830rna1830-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1832rna1832Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1831rna1831Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1830rna1830Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1832

>rna1832-protein ID=rna1832-protein|Name=rna1832|organism=Nannochloropsis gaditana|type=polypeptide|length=379bp
MRWIVHVLRIPPSSSRLHSNSFLNLQPRPGMRSFQGVASLQGKNFMNIDE
LTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRSTRTRV
STETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILARVFAH
TDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQGKVLTW
VGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQRSGGS
YVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTRRMMEH
GAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENRMWTVM
AVMLSLVGGGGRGCEVGESHNGGGGRRSS
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protein sequence of rna1831

>rna1831-protein ID=rna1831-protein|Name=rna1831|organism=Nannochloropsis gaditana|type=polypeptide|length=384bp
MWALKLSRPFMECHTRHLKPNLLANGYGLWAREGGMRSFQGVASLQGKNF
MNIDELTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRS
TRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILA
RVFAHTDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQG
KVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQ
RSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTR
RMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENR
MWTVMAVMLSLVGGGGRGCEVGESHNGGGGRRSS
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protein sequence of rna1830

>rna1830-protein ID=rna1830-protein|Name=rna1830|organism=Nannochloropsis gaditana|type=polypeptide|length=384bp
MWALKLSRPFMECHTRHLKPNLLANGYGLWAREGGMRSFQGVASLQGKNF
MNIDELTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRS
TRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILA
RVFAHTDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQG
KVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQ
RSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTR
RMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENR
MWTVMAVMLSLVGGGGRGCEVGESHNGGGGRRSS
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Synonyms
Publications