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Properties
| Property Name | Value |
|---|
| Product | ornithine mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100402g6.3859.mrna |
| Orig protein id | gnl|cribi|Naga_100402g6.3859 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:250921..254219 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1830 ID=rna1830|Name=rna1830|organism=Nannochloropsis gaditana|type=mRNA|length=1214bp
CGCGCCCCGGCCCACCTGCACCCAAGGTCGATGCCTCGCACGCCTTTGCC
CGGCTCGTCTTCCTCCGCCGGCTTCTCCTCAGCGCTGCTCGGTGTTTTTT
GGAGGTCCGCTTACATGAAGGGGAGTGGTCCGCGCGGCAAGTCTGCAATT
TCTTGGAATCGGAGCTGGTTCTTTCCAAGGGCGAAGCCCGCCGGGAAGTG
ATGATGTACCTCAGGCATCCCTTGACGGCAAGCGCGGGCTTAATGGGCTG
GGAAGAGTTGCGGGAATGGAGGAGGATGGAGGTGGATGACCGACGGCAAG
GAAAGAGGGGGGAAGGGAGGGCGGCGAGGACGGAGAGGGACAACCAGGAA
TGGTGGGAGAAGGCGGCAAGCTTCGGGCGGATACCTCCGTGTTACGTGAT
GTATTTGGAAGAGAAGAGGCGGGAGGGAGCGAAAGGAGAGGCATGAGAAG
GGACGATTGGACGGGCGAGGGAGAGAGGAGGGGGGGAAGGAGGGAGGGAG
GGAGGACGAGGAGAAAGTCGAGGAGGGTGGAGGTATGCCTGTGTACAAAT
ACACAAACATGTACGATCTATCTCGGAAGGAAGTTGGCCACGAGGCGCCC
GCTTGGAAGAAAAGTCGGCCGAAAAGGACCGAAAGGGGAGGAACGGGAAG
AGAAAGCAGCGGCTGGCAGGTGGGCATGGAGGGAGAAAGCGTGCCACAGG
CGGCAGCGTGCAGCAAGTCTACGGGTTGCATGTGGGAATAAGGGTGATAT
TTGTCGAACAGGTGGAAGTGGTCAGGTGCCAGGTGAAGCCAGAGAGCCCC
AGGGCCGGCATCCTTGGAGGAGGCTGCCCAGAGGTGAGCCTTGCCCTACC
TAAAATGAAGCCAGCGTCGCACGAATAGAGAGAATCGATGCCACATGCGT
GTGGAATCCCCTGTGAGGGGGAGCAATGACGGCCAAACTTGAGAAAAAAG
GCGCGAAAGCAACGCCGCCCGGAGAGTTTCTACTTTGACTAGACAAGACG
CCCGGTTTCTTCCAAAGGAGAGGCAGCCGCAAGCAAGAAAAGCCCTGAAG
TTTTGCCTTGAGCTGTGGTCATTTAGTTGGGATTGTCCCCCGCCATTGTT
TGCCCTTTGCCTGTCAGCTACTCCTTCTCCCCCCCCCACCGTTGTGACTC
TCTCCCACCTCACACCCTCTTCCCCCCCCCCCCACCAACGAAAGCATGAC
GGCCATGACCGTCC back to topprotein sequence of rna1830 >rna1830-protein ID=rna1830-protein|Name=rna1830|organism=Nannochloropsis gaditana|type=polypeptide|length=384bp
MWALKLSRPFMECHTRHLKPNLLANGYGLWAREGGMRSFQGVASLQGKNF
MNIDELTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRS
TRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILA
RVFAHTDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQG
KVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQ
RSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTR
RMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENR
MWTVMAVMLSLVGGGGRGCEVGESHNGGGGRRSS back to topmRNA from alignment at CM002458.1:250921..254219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1830 ID=rna1830|Name=rna1830|organism=Nannochloropsis gaditana|type=mRNA|length=3299bp|location=Sequence derived from alignment at CM002458.1:250921..254219- (Nannochloropsis gaditana)
ATCAATCCCCGGTCCTTATTCGTCGATGACTGACCAGGACATACACGCAC
GATAGGGGCCCCGGTGCACGGTCGTGACGGAAAGCCGTGGGTTTGTGTTT
GGTTGACTTCAGACCTATCGTTGCTGCATGGCAAAGGTAAGGCATCGCCT
CCTCCATTATACTCAACCCCGTAGTTATGTTCCGCAAGCTTGGTCTTCCC
GTCCTTGTCTACGCACGTAGTGCCAAAAATATCTAACTTATCCCTTTCCC
TGGCCAACATACTAGCCAAAAAATCTGTTCATAAAGCTAATGTCTGCGGC
CGGCACCGGGTAAGTCACGCAGCAAGAAAGCGTTCAGATCGACAGGAAGA
CCGACGAGCACGCACACTTGGGTTATCAACTACCTTCCCATCGCATGTCA
CATCTTCACAGCTTCTTCTATGTCACGCGCAAAAATCCTAAAAATGTGAC
AAGGAAACTCGCGCTAAGGAAGGTAGGCAACATGAGATATTGATGGCATG
TCTGGAGCCTGACACGAGAAGGGTGGTTGGGGATTTATATAGCGTGAGGT
GGGTGCGTGAAGGCAAAGCTGTGTTAAGGAGTTTGCGAGATAAGGTTGAG
TGAATTTTTACGCATTTATCTGAAATCATCGTCCTTTTCCCTTGTCTTTT
ACTGCTTTCCTTCCCGAATGTTGCCCGTCAGTACGACCCAGTTGTCCGAA
AGCACGTGCTTTTCACCGAGACAAAGCTGAGGTAGCGGGTGCGGCATTGG
CTTCATTTTGTCGTTGTAAAGTGTATGGCGAAGAATTAAAGGCATGGGTA
ACGTGCCGTCTCTGAATTTATGACTACTGCCTTGCAGGAGTGCATTCATC
CTCTCTTGTTCTTTGCATTTCTGTTCGAGGATTGAAAAAACCACGTTCCA
AGTCTTATCATTTCAAATACTAAAGATTGAGGATGGGCGCGAGCAACTTT
AATCCCTCGAGTTCTTTGTTTGACATGTACGGCTCCCTCATAAGAGCTTA
GAGCTCTGTTATATCGCTACTACATTTTAGAAATTACGCGGACAAGGGTG
CACCTTCAATCCTACGAATAGCTCAAGCGCGAAACATTGTCGGCCTTGTG
ATCGACACCCTTATTTATATTCTCTATTGTTCTCATTGTAAAGACTCTGA
ACCAGATTGTGCGGTGAAGTTGTTACCTCTTCATGTCCACTCCGGCAACT
TCATAGCACGCCAGCGCACCCCTCTACCTGTGTTGCTGCAACATATCCAC
AGCTTGCCTTAACTATGAATGTCCTTTGCCATTCAAGGTGCTGTCCCATG
GGTGTATGTTTCAAGACTTGTTTTTGCGGCCTTTTTTTCTCCCTCGTCCC
TGGGGAGTTTTTCTCACGGCTTTGAAAAGTCAACTTTCCGTTATACTTAT
TTGAGGTAAAATTGAGGACAAAACTAATTTCATGTGTTGCCTAGAATAGA
AAATTTCATACGAGCAGGTCGCAATCGTGGTTAACAAGATTCTTGGGGGG
GGAATAAGGAGAAGGGGGGATGCAAACAAGGTGTCACATAGTTATGGGGT
GGGGAGGTTTTCCTTTGATCGATCTTTACATACACTTCTGCGGTAAATCT
GCGACTTCGATGAAAGGTTAGCAATCTCCTTACATTTGGTGACTGAATGT
CTGCAGTCGGATGGATCTGCATGCAAATGCTAACTATACTTCTTTCGCTT
CCTAAAACAGGATACTCTCGTAGGCTCCTTTCCCCCCGGTCACTCCACCA
TGTGGGCACTTAAGCTGTCCCGTCCTTTCATGGAGTGTCACACGCGACAT
CTAAAGCCAAATTTGCTTGCAAACGGATACGGGCTCTGGGCGCGGGAGGG
AGGTTCGTTCTTGGTTATAGGTTGAAAGTCTTGCCTCCGAGACCCTACAT
CTCTCTTCACCGTTGTACTTAAATCCTCCTTCCTTCTGTTCGTGGCTACC
GGTTGAAAGCGTACATCGTCTTCACCCTTAGTTAGGACTCTTTTCGTTCA
AGTCATGCGTTGGATTGTTCATGTGTTGCGTATACCTCCTAGCTCCTCAC
GACTCCATTCCAACTCATTTTTGAATTTACAACCGCGTCCAGGCATGCGC
TCTTTTCAAGGCGTGGCCAGTCTGCAAGGGAAAAACTTTATGAACATCGA
CGAACTCACGGACGTCGAGCTCCGGGACCTCCTTTCCCTTTCTGCTCAAT
TGAAGAAAGCCTATTCCTCGCCCAGTCCTCCCGTCCTTCCTCGGCCGTGC
GAGGGAAAAAGCGTCAGTATGATTTTCCAAAAACGCAGTACGCGTACACG
CGTATCGACCGAGACAGGCATGGCTCTTCTGGGTGGCCACGCCTTGTTTC
TGGGTCCACAAGATGTACAGTTGGGCGTAAACGAGAGTATGCGGGACACG
GCGAATGTGCTTTCCCGCTTCAATTCCCTTATCCTCGCCCGAGTGTTCGC
CCACACGGACGTCCAGCTCCTCGCGAAACATTCCAGCGTCCCCGTCATCA
ATGCCTTGTCCGATCTTTACCACCCTTTGCAGGCCCTGGCCGATCTCCTG
ACCCTGGAGGAGCATTTTGGGAAGGGGAGTTTACAGGGGAAAGTTCTGAC
ATGGGTAGGTGACGGGAACAACGTCCTGCACGATCTGGCCATGGGCGCAG
CTCGTCTGGGTATGCACGTGCGGGTAGCCTGTCCCGTCGGCTACGAGCCC
AACGGCGAAATTATGCACCGGGTGGAGTGGCACGCCCAGCGGTCGGGGGG
GTCGTATGTGATGGAAAGAGACCCGATGACGGCCGTCGCGGGCGCGCACG
TGATCGTGACGGACACCTGGGTGAGCATGGGCCAAGAGGAGGAGTACGAG
AGGCGGATGCGGGATTTTGAGGGCTTTCAGGTGACGAGACGCATGATGGA
GCATGGGGCCAAGGGGTCAAATGCCGGGCGGCCGGCCTGCGTGTTCTTGC
ACTGCCTGCCCCGCCATCCCGAGGAGGTGACGGACGAGGTCTTTTACGAC
CCCGCACGGAGTTTGGTGTTCCCAGAGGCGGAAAACCGGATGTGGACGGT
CATGGCCGTCATGCTTTCGTTGGTGGGGGGGGGGGGAAGAGGGTGTGAGG
TGGGAGAGAGTCACAACGGTGGGGGGGGGAGAAGGAGTAGCTGACAGGCA
AAGGGCAAACAATGGCGGGGGACAATCCCAACTAAATGACCACAGCTCAA
GGCAAAACTTCAGGGCTTTTCTTGCTTGCGGCTGCCTCTCCTTTGGAAGA
AACCGGGCGTCTTGTCTAGTCAAAGTAGAAACTCTCCGGGCGGCGTTGC back to topCoding sequence (CDS) from alignment at CM002458.1:250921..254219- >rna1830 ID=rna1830|Name=rna1830|organism=Nannochloropsis gaditana|type=CDS|length=2310bp|location=Sequence derived from alignment at CM002458.1:250921..254219- (Nannochloropsis gaditana)
GCATGCGCTCTTTTCAAGGCGTGGCCAGTCTGCAAGGGAAAAACTTTATG
AACATCGACGAACTCACGGACGTCGAGCTCCGGGACCTCCTTTCCCTTTC
TGCTCAATTGAAGAAAGCCTATTCCTCGCCCAGTCCTCCCGTCCTTCCTC
GGCCGTGCGAGGGAAAAAGCGTCAGTATGATTTTCCAAAAACGCAGTACG
CGTACACGCGTATCGACCGAGACAGGCATGGCTCTTCTGGGTGGCCACGC
CTTGTTTCTGGGTCCACAAGATGTACAGTTGGGCGTAAACGAGAGTATGC
GGGACACGGCGAATGTGCTTTCCCGCTTCAATTCCCTTATCCTCGCCCGA
GTGTTCGCCCACACGGACGTCCAGCTCCTCGCGAAACATTCCAGCGTCCC
CGTCATCAATGCCTTGTCCGATCTTTACCACCCTTTGCAGGCCCTGGCCG
ATCTCCTGACCCTGGAGGAGCATTTTGGGAAGGGGAGTTTACAGGGGAAA
GTTCTGACATGGGTAGGTGACGGGAACAACGTCCTGCACGATCTGGCCAT
GGGCGCAGCTCGTCTGGGTATGCACGTGCGGGTAGCCTGTCCCGTCGGCT
ACGAGCCCAACGGCGAAATTATGCACCGGGTGGAGTGGCACGCCCAGCGG
TCGGGGGGGTCGTATGTGATGGAAAGAGACCCGATGACGGCCGTCGCGGG
CGCGCACGTGATCGTGACGGACACCTGGGTGAGCATGGGCCAAGAGGAGG
AGTACGAGAGGCGGATGCGGGATTTTGAGGGCTTTCAGGTGACGAGACGC
ATGATGGAGCATGGGGCCAAGGGGTCAAATGCCGGGCGGCCGGCCTGCGT
GTTCTTGCACTGCCTGCCCCGCCATCCCGAGGAGGTGACGGACGAGGTCT
TTTACGACCCCGCACGGAGTTTGGTGTTCCCAGAGGCGGAAAACCGGATG
TGGACGGTCATGGCCGTCATGCTTTCGTTGGTGGGGGGGGGGGGAAGAGG
GTGTGAGGTGGGAGAGAGTCACAACGGTGGGGGGGGGAGAAGGAGTAGCT
GAATGTGGGCACTTAAGCTGTCCCGTCCTTTCATGGAGTGTCACACGCGA
CATCTAAAGCCAAATTTGCTTGCAAACGGATACGGGCTCTGGGCGCGGGA
GGGAGGCATGCGCTCTTTTCAAGGCGTGGCCAGTCTGCAAGGGAAAAACT
TTATGAACATCGACGAACTCACGGACGTCGAGCTCCGGGACCTCCTTTCC
CTTTCTGCTCAATTGAAGAAAGCCTATTCCTCGCCCAGTCCTCCCGTCCT
TCCTCGGCCGTGCGAGGGAAAAAGCGTCAGTATGATTTTCCAAAAACGCA
GTACGCGTACACGCGTATCGACCGAGACAGGCATGGCTCTTCTGGGTGGC
CACGCCTTGTTTCTGGGTCCACAAGATGTACAGTTGGGCGTAAACGAGAG
TATGCGGGACACGGCGAATGTGCTTTCCCGCTTCAATTCCCTTATCCTCG
CCCGAGTGTTCGCCCACACGGACGTCCAGCTCCTCGCGAAACATTCCAGC
GTCCCCGTCATCAATGCCTTGTCCGATCTTTACCACCCTTTGCAGGCCCT
GGCCGATCTCCTGACCCTGGAGGAGCATTTTGGGAAGGGGAGTTTACAGG
GGAAAGTTCTGACATGGGTAGGTGACGGGAACAACGTCCTGCACGATCTG
GCCATGGGCGCAGCTCGTCTGGGTATGCACGTGCGGGTAGCCTGTCCCGT
CGGCTACGAGCCCAACGGCGAAATTATGCACCGGGTGGAGTGGCACGCCC
AGCGGTCGGGGGGGTCGTATGTGATGGAAAGAGACCCGATGACGGCCGTC
GCGGGCGCGCACGTGATCGTGACGGACACCTGGGTGAGCATGGGCCAAGA
GGAGGAGTACGAGAGGCGGATGCGGGATTTTGAGGGCTTTCAGGTGACGA
GACGCATGATGGAGCATGGGGCCAAGGGGTCAAATGCCGGGCGGCCGGCC
TGCGTGTTCTTGCACTGCCTGCCCCGCCATCCCGAGGAGGTGACGGACGA
GGTCTTTTACGACCCCGCACGGAGTTTGGTGTTCCCAGAGGCGGAAAACC
GGATGTGGACGGTCATGGCCGTCATGCTTTCGTTGGTGGGGGGGGGGGGA
AGAGGGTGTGAGGTGGGAGAGAGTCACAACGGTGGGGGGGGGAGAAGGAG
TAGCTGAATGTGGGCACTTAAGCTGTCCCGTCCTTTCATGGAGTGTCACA
CGCGACATCTAAAGCCAAATTTGCTTGCAAACGGATACGGGCTCTGGGCG
CGGGAGGGAG back to top
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