NO04G04600, NO04G04600 (gene) Nannochloropsis oceanica

Overview
NameNO04G04600
Unique NameNO04G04600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2353
Alignment locationchr4:1251572..1253924 +

Link to JBrowse

Properties
Property NameValue
DescriptionOrnithine mitochondrial-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1251572..1253924 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016597amino acid binding
GO:0016743carboxyl- or carbamoyltransferase activity
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036901Asp/Orn_carbamoylTrfase_sf
IPR006131Asp_carbamoyltransf_Asp/Orn-bd
IPR006132Asp/Orn_carbamoyltranf_P-bd
IPR002292Orn/put_carbamltrans
IPR006130Asp/Orn_carbamoylTrfase
Homology
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: EWM28844.1 (ornithine mitochondrial-like protein [Nannochloropsis gaditana] >EWM28845.1 ornithine mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 551.2 bits (1419), Expect = 2.900e-153
Identity = 283/363 (77.96%), Postives = 305/363 (84.02%), Query Frame = 0 
Query:   74 MWARKLTRPFTAAGAVRLQE--AGAGSGLSGLGGATRAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGA-GKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVG 434
            MWA KL+RPF       L+      G GL    G  R+FQGVASL+GK+ MNIDELTD ELR LLSLSAQLK  Y S SP  LPRP  G SVSMIFQKRSTRTRVSTETGMA+LGGHALFLGPQD+QLGVNES+RDTA VLSRFNSLILARVFAH DVQ+LAKHSSVPVINALSDLYHPLQALADLLTLEEHFG+G ++GKVL WVGDGNNVLHDLAMGA RLGMHVRVACP GYEP+ E+M +V+ HAQR GGS +M RDPM AV GA+V+VTDTWVSMGQEEEYE+RMRDFEGFQV + MME GA G   G+  CVFLHCLPRHPEEVTDEVFYD  RSLVFPEAENRMWTVMAVMLSLVG
Sbjct:    1 MWALKLSRPFMECHTRHLKPNLLANGYGLWAREGGMRSFQGVASLQGKNFMNIDELTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRSTRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILARVFAHTDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQGKVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQRSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTRRMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENRMWTVMAVMLSLVG 363
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: EWM28846.1 (ornithine mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 539.7 bits (1389), Expect = 8.600e-150
Identity = 270/327 (82.57%), Postives = 290/327 (88.69%), Query Frame = 0 
Query:  108 RAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGA-GKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVG 434
            R+FQGVASL+GK+ MNIDELTD ELR LLSLSAQLK  Y S SP  LPRP  G SVSMIFQKRSTRTRVSTETGMA+LGGHALFLGPQD+QLGVNES+RDTA VLSRFNSLILARVFAH DVQ+LAKHSSVPVINALSDLYHPLQALADLLTLEEHFG+G ++GKVL WVGDGNNVLHDLAMGA RLGMHVRVACP GYEP+ E+M +V+ HAQR GGS +M RDPM AV GA+V+VTDTWVSMGQEEEYE+RMRDFEGFQV + MME GA G   G+  CVFLHCLPRHPEEVTDEVFYD  RSLVFPEAENRMWTVMAVMLSLVG
Sbjct:   32 RSFQGVASLQGKNFMNIDELTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRSTRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILARVFAHTDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQGKVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQRSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTRRMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENRMWTVMAVMLSLVG 358
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_005854047.1 (ornithine carbamoyltransferase, partial [Nannochloropsis gaditana CCMP526] >EKU22313.1 ornithine carbamoyltransferase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 538.5 bits (1386), Expect = 1.900e-149
Identity = 269/326 (82.52%), Postives = 290/326 (88.96%), Query Frame = 0 
Query:  108 RAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGA-GKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLV 433
            R+FQGVASL+GK+ MNIDELTD ELR LLSLSAQLK  Y S SPS LPRP  G SVSMIFQKRSTRTRVSTETGMA+LGGHALFLGPQD+QLGVNES+RDTA VLSRFNSLILARVFAH DVQ+LAKHSSVP+INALSDLYHPLQALADLLTLEEHFG+G ++GKVL WVGDGNNVLHDLAMGA RLGMHVRVACP GYEP+ E+M +V+ HAQR GGS +M RDPM AV GA+V+VTDTWVSMGQEEEYE+RMRDFEGFQV + MME GA G   G+  CVFLHCLPRHPEEVTDEVFYD  RSLVFPEAENRMWTVMAVMLSLV
Sbjct:    3 RSFQGVASLQGKNFMNIDELTDVELRDLLSLSAQLKKAYSSPSPSVLPRPCEGKSVSMIFQKRSTRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILARVFAHTDVQLLAKHSSVPIINALSDLYHPLQALADLLTLEEHFGKGSLQGKVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQRSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTRRMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENRMWTVMAVMLSLV 328
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_002184453.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44202.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 407.1 bits (1045), Expect = 6.700e-110
Identity = 205/322 (63.66%), Postives = 256/322 (79.50%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            V +L+G+H M+ID+L+ +EL+GLL ++   KA Y ++  ++ PRPL G S+SMIFQKRSTRTRVS+ETGMA+LGGHALFLGP D+QLGVNES+RDTA VL+RFNSLILARVF H DV  LAK+S+VPVINALSD +HPLQ LADL+TL++HFG+  + GK +AWVGDGNNVLHDL +G+  LGM+V +A P GYEPDA++++  +G A  +G  +  T     AV+ A+VVVTDTWVSMGQEEEY KR+ +F+G+QVNKA++   +         VFLHCLPRHPEEV DEVFY  ERSLVFPEAENRMWTVMAVM + +GK
Sbjct:   36 VGTLEGQHFMSIDQLSKTELQGLLDVAHHYKAQY-ATQTANTPRPLAGHSMSMIFQKRSTRTRVSSETGMALLGGHALFLGPSDVQLGVNESMRDTANVLARFNSLILARVFGHADVTELAKYSAVPVINALSDRHHPLQTLADLMTLQQHFGKDKLRGKTVAWVGDGNNVLHDLMLGSALLGMNVNIATPTGYEPDAQILETTRGFAAAEGMKVQTTTVAAEAVKDAHVVVTDTWVSMGQEEEYAKRVAEFDGYQVNKALISHAS------PDAVFLHCLPRHPEEVDDEVFY-SERSLVFPEAENRMWTVMAVMAAQLGK 349
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: XP_002286586.1 (hypothetical protein THAPSDRAFT_997 [Thalassiosira pseudonana CCMP1335] >EED96227.1 hypothetical protein THAPSDRAFT_997 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 407.1 bits (1045), Expect = 6.700e-110
Identity = 210/338 (62.13%), Postives = 264/338 (78.11%), Query Frame = 0 
Query:  101 SGLGGATRAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSS---PSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKG-GSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            +G      +   ++ L+GKH ++ID+L++ ELRGLL LS + + TY  +S   P++ P+PLTG SVSMIFQKRSTRTRVSTETGM +LGG +LFLGP DIQLGVNES+RDTA VLSRFNSLILARVF+H DV  L++H++VPVINALSDL+HPLQ LADL+ LE+HFG+  ++GK LAWVGDGNNVLHDLA+G  +LGM++R+A P GYE DA V+   +  A   G   + +T     AV+G++VVVTDTWVSMGQEEEYEKR+++F+G+QVN  +M++         G VFLHCLPRHPEEV+DEVFY ++ SLVFPEAENRMWTVMAVM S +GK
Sbjct:   23 NGCAKRAMSISALSGLEGKHFISIDKLSNEELRGLLDLSKKYRDTYGKNSAADPATAPKPLTGQSVSMIFQKRSTRTRVSTETGMNLLGGQSLFLGPSDIQLGVNESMRDTALVLSRFNSLILARVFSHNDVLELSEHATVPVINALSDLHHPLQTLADLMALEDHFGD--LKGKTLAWVGDGNNVLHDLALGGAKLGMNIRIATPVGYEADAGVLDTTRKLAAESGTEDVFLTNVAAEAVKGSDVVVTDTWVSMGQEEEYEKRVKEFDGYQVNATLMKQ------ANPGAVFLHCLPRHPEEVSDEVFYSDQ-SLVFPEAENRMWTVMAVMASQLGK 351
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: EJK73021.1 (hypothetical protein THAOC_05385 [Thalassiosira oceanica])

HSP 1 Score: 397.9 bits (1021), Expect = 4.000e-107
Identity = 212/362 (58.56%), Postives = 265/362 (73.20%), Query Frame = 0 
Query:   77 RKLTRPFTAAGAVRLQEAGAGSGLSGLGGATRAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATY---KSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKG-GSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            R L  P  AA    L  A  G  +S L             +GKH ++ID+L++ ELRGLL LS + + TY    S +P   P+PLTG SVSMIFQKRSTRTRVSTETGM +LGG +LFLGP DIQLGVNES+RDTA VLSRFNSL+LARVFAH D+  L+K+++VPVINALSDL+HPLQ LADL+ LE+HF  G ++GK LAWVGDGNNVLHDL +G  +LGM++R+A P GY+ ++ V++  +  A   G   +  T     AV+G++VVVTDTWVSMGQE+EYE+R+++F+G+QVN A+M +         G VFLHCLPRHPEEV+DEVFY E+ SLVFPEAENRMWTVMAVM + +GK
Sbjct:    7 RALQSPAAAARVAALSTAKRGMSISSL----------TQFEGKHFISIDQLSNDELRGLLDLSKKYRDTYGKGSSVNPVEAPKPLTGQSVSMIFQKRSTRTRVSTETGMNLLGGQSLFLGPSDIQLGVNESMRDTALVLSRFNSLVLARVFAHDDILELSKYATVPVINALSDLHHPLQTLADLMALEDHF--GNLKGKTLAWVGDGNNVLHDLMLGGAKLGMNIRIATPAGYDANSGVLETTKQLAAENGTADVFETTVASEAVKGSDVVVTDTWVSMGQEDEYEQRVKEFDGYQVNSALMAQ------ANDGAVFLHCLPRHPEEVSDEVFYSEQ-SLVFPEAENRMWTVMAVMAAQLGK 349
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: GAX15624.1 (ornithine carbamoyltransferase [Fistulifera solaris])

HSP 1 Score: 388.3 bits (996), Expect = 3.200e-104
Identity = 200/322 (62.11%), Postives = 248/322 (77.02%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            + SLKG H ++ D+L+  EL+GLL LS   K TYK+      P+PL G S++MIFQKRSTRTRVSTETG+AM+GGHALFLGP DIQLGVNES+RDTA VLSRFNS+ILARV++H D+  LAK+++VPVINALSDL+HPLQ+LADL+TL+EHFG+  + GK +AWVGDGNNVLHDLA+G+  LGM+V +A P G+E +  ++ KV+  A + GG +M T     AV  A+VVVTDTWVSMGQE+EY  R++ F+G+QVNK +M K           VFLHCLPRHPEEV DEVFY  + SLVF EAENRMWTVMAV  + +GK
Sbjct:   24 IQSLKGVHFVSTDQLSKEELQGLLDLSKYYKDTYKAKG-GLKPKPLEGDSMAMIFQKRSTRTRVSTETGIAMMGGHALFLGPSDIQLGVNESMRDTALVLSRFNSIILARVYSHNDITELAKYATVPVINALSDLHHPLQSLADLMTLQEHFGK-DLSGKTVAWVGDGNNVLHDLALGSAILGMNVNIATPAGFECNPTILAKVKELAAKHGGKVMTTSVAADAVANADVVVTDTWVSMGQEDEYAARLKAFDGYQVNKELMSK------ANPNAVFLHCLPRHPEEVADEVFYSPQ-SLVFDEAENRMWTVMAVAAAQLGK 336
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: GAX19152.1 (ornithine carbamoyltransferase [Fistulifera solaris])

HSP 1 Score: 387.5 bits (994), Expect = 5.500e-104
Identity = 200/322 (62.11%), Postives = 247/322 (76.71%), Query Frame = 0 
Query:  113 VASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK 435
            + SLKG H ++ D+L+  EL+GLL LS   K TYK+      P+PL G S++MIFQKRSTRTRVSTETG+AM+GGHALFLGP DIQLGVNES+RDTA VLSRFNS+ILARV++H D+  LAK+++VPVINALSDL+HPLQ+LADL+TL+EHFG+  + GK +AWVGDGNNVLHDLA+G+  LGM+V +A P G+E +  ++ KV+  A + GG +M T     AV  A+VVVTDTWVSMGQE EY  R++ F+G+QVNK +M K           VFLHCLPRHPEEV DEVFY  + SLVF EAENRMWTVMAV  + +GK
Sbjct:   24 IQSLKGVHFVSTDQLSKEELQGLLDLSKYYKETYKAKG-GLKPKPLEGDSMAMIFQKRSTRTRVSTETGIAMMGGHALFLGPSDIQLGVNESMRDTALVLSRFNSIILARVYSHNDIAELAKYATVPVINALSDLHHPLQSLADLMTLQEHFGK-DLSGKTVAWVGDGNNVLHDLALGSAILGMNVNIATPAGFECNPTILAKVKELAAKHGGKVMTTSVAADAVANADVVVTDTWVSMGQEAEYAARLKAFDGYQVNKELMSK------ANPNAVFLHCLPRHPEEVADEVFYSPQ-SLVFDEAENRMWTVMAVAAAQLGK 336
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: GBG33119.1 (Ornithine carbamoyltransferase, mitochondrial [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 361.7 bits (927), Expect = 3.200e-96
Identity = 196/362 (54.14%), Postives = 248/362 (68.51%), Query Frame = 0 
Query:   78 KLTRPFTAAGAVRLQEAGAGSGLSGLGGA------TRAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLVG 434
            K TRP  AA         A    S  G A       +  +GV   KG+HLM ID+    EL  +L+ S  LK   K+     +P+ L G SV+ IFQKRSTRTRVSTETGM +LGG  LFL  QD+QLGVNE+++D+A VLSRFNSLILARVF H  V  LA+H++VPVINALSD++HPLQ LAD +T++E FG   ++GK LAWVGDGNNVLHDL + A  +G+++R+  PEGY PDA +MK  +  AQ+ G  + +  DP+  V G N+VVTDTWVSMGQEEE  KR++ FEG++VN  +M KG    G     +F+HCLPRHPEEV+DEVFY  +RS+VF EAE RM+TVMAVM + +G
Sbjct:   11 KATRPAQAAATKTTTTRLAWRAFSTSGPAEYTQEHRKTLEGV---KGRHLMRIDDYCKEELEAILAFSRHLKDLVKA---EKVPQALHGKSVACIFQKRSTRTRVSTETGMNLLGGSPLFLSSQDVQLGVNETIKDSALVLSRFNSLILARVFGHDTVHELAEHATVPVINALSDMHHPLQTLADFMTIQERFGPENVKGKTLAWVGDGNNVLHDLMLAAPPMGVNLRICTPEGYRPDAGIMKDTEALAQKFGTDIWVGADPIEGVAGCNIVVTDTWVSMGQEEEAAKRIKAFEGYEVNSELMSKG----GAADDWIFMHCLPRHPEEVSDEVFY-SDRSVVFDEAEARMYTVMAVMATQLG 361
[Close]
BLAST of NO04G04600 vs. NCBI_GenBank
Match: CBN76155.1 (ornithine transcarbamoylase [Ectocarpus siliculosus])

HSP 1 Score: 360.5 bits (924), Expect = 7.200e-96
Identity = 192/323 (59.44%), Postives = 235/323 (72.76%), Query Frame = 0 
Query:  111 QGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYK-SSSPSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLGVNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRVACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVSMGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEVTDEVFYDEERSLVFPEAENRMWTVMAVMLSLV 433
            QGV SL G+ LM+I +L+ +EL  LL  S  LK  +K SSS     + L G SV+MIFQKRSTRTRVSTETGM +LGG ALFLGP DIQLGVNES++DTA VLS FNSL+LARV  H DV+ L   + VPVINALSDL+HPLQ LADL+T++E FG+  +EG    WVGDGNNVLHDL +GA +L +++R+A PEGY PD  V    +  A+  G S+++T DP  AV G +VV TDTWVSMGQEEE  KR++D+EG+QV   +M   A         +F+HCLPRH EEV D VFY  ERS+VFPEAENRMWTVMA+M S++
Sbjct:    5 QGVKSLAGRSLMSIADLSKAELIELLDCSIALKKAFKDSSSGIEKEQKLIGKSVAMIFQKRSTRTRVSTETGMGLLGGRALFLGPTDIQLGVNESMKDTAKVLSGFNSLLLARVNDHADVEELKAEARVPVINALSDLHHPLQTLADLMTIQERFGK--LEGLTFTWVGDGNNVLHDLMLGAAKLAINLRIATPEGYRPDPAVTAMTEALAKESGSSVLITADPKEAVTGTHVVATDTWVSMGQEEEAAKRIKDYEGYQVTDELMSLAAD------DAIFMHCLPRHKEEVDDAVFY-SERSVVFPEAENRMWTVMALMQSML 318
The following BLAST results are available for this feature:
BLAST of NO04G04600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28844.12.900e-15377.96ornithine mitochondrial-like protein [Nannochlorop... [more]
EWM28846.18.600e-15082.57ornithine mitochondrial-like protein [Nannochlorop... [more]
XP_005854047.11.900e-14982.52ornithine carbamoyltransferase, partial [Nannochlo... [more]
XP_002184453.16.700e-11063.66predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002286586.16.700e-11062.13hypothetical protein THAPSDRAFT_997 [Thalassiosira... [more]
EJK73021.14.000e-10758.56hypothetical protein THAOC_05385 [Thalassiosira oc... [more]
GAX15624.13.200e-10462.11ornithine carbamoyltransferase [Fistulifera solari... [more]
GAX19152.15.500e-10462.11ornithine carbamoyltransferase [Fistulifera solari... [more]
GBG33119.13.200e-9654.14Ornithine carbamoyltransferase, mitochondrial [Aur... [more]
CBN76155.17.200e-9659.44ornithine transcarbamoylase [Ectocarpus siliculosu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009327NSK009327Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04600.1NO04G04600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579610gene_2248Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100402g6gene1758Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04600.1NO04G04600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04600 ID=NO04G04600|Name=NO04G04600|organism=Nannochloropsis oceanica|type=gene|length=2353bp
TCTCTTGGGACTGATAAATTGGTACACTTTGTTGTGTGCGGCCGCGATTA
AAGTAAGGACAACAAAGGAGACGCATCGACCAGCACCCTTCTCCTGCAAA
CTCCTTGTTTTGCTCCTAGTGATGGCGGTGAAGGCGACGACAAATTTGCG
TGAGTTGTTGTTTTGTATCTGCTCACCTCGTGTCCCCATCGATTCACTCT
CGTCCGCTTGATCTCGGCTACGGCATGGGCGGCGGCGATCATGCCGCGCG
CTATACTTCGAGACGAAGCCACACTTCGACCGGGCACTCAAGCGCGCCTG
AACGGGCACTTATCTTTTTTGTAATTGTGCATATTCACATCGGCATGCTC
ATTCCGGCACTTATCTTGGTCTCCCTTGTCTTTGTCCTTCAACAAACCAC
AGCCTCCTCCCCAACCCCGTGCCACAAGCCAACAAGACCAAATATGTGGG
CACGCAAGCTCACCCGTCCCTTCACGGCTGCAGGAGCCGTACGATTACAA
GAAGCAGGAGCAGGAAGTGGACTATCGGGTCTTGGAGGGGgtatgtacta
gatttacgttgcctctccgtgtgctgatcttcctctccctcaaccccact
cgatccctgtaacccacacccaccactccacgcacgcgttacagtagcat
ctttttaagcactacttagtgttacttgatatgattcccttcttgccacg
attacatatacaattgctcgctgtacatggataatttgttttcaatcttt
tcctctaccctccctcactctcatgtgtctggaccatgaaagagcgctgt
cgcactcgcaagggcacacacgtatcatctgcgtaacattcatgacatga
cgtccctcaaacctaagacgtttccaggcatgtccacaaaaaataaatga
cgattctcgcggtagatttggttgggcggcttccatgcacgcccttggcc
tgatgtcaatatggcgtggccctcgtggctgtcctccagcaaatgtgaat
atgatatcctcttctgccgtacacagtctgcaatgccatcctcttgaatg
caggccttcgactgagcccctctcgggccccctttgacgctcactctttc
cttctgtccctccctccttcccccctcctttcagCCACCCGCGCCTTCCA
AGGCGTCGCCAGCTTGAAAGGAAAGCACTTGATGAACATCGACGAGCTCA
CGGACAGCGAGCTCCGGGGCCTACTCTCCCTCTCCGCCCAACTCAAAGCC
ACGTACAAGTCCTCCTCCCCTTCCTCCCTCCCTCGCCCCCTGACGGGAAC
ATCCGTGAGCATGATCTTCCAAAAACGGAGCACGCGTACCCGTGTCTCCA
CAGAGACGGGCATGGCTATGCTAGGCGGACATGCCCTTTTTCTTGGTCCA
CAAGACATTCAATTAGGGGTGAACGAGTCCTTGCGTGATACGGCGGCTGT
CCTCTCTCGCTTCAACTCCCTCATCCTGGCCCGAGTGTTTGCGCATCCCG
ACGTGCAAATGCTGGCAAAGCACTCCTCGGTGCCTGTGATCAATGCTCTG
TCCGACTTGTACCACCCACTGCAAGCCCTGGCCGATTTGCTGACCCTGGA
GGAGCACTTCGGGGAGGGCGGGATGGAGGGCAAGGTCCTGGCGTGGGTCG
GTGACGGGAATAACGTCCTCCACGACCTGGCCATGGGCGCAGTGCGGCTG
GGAATGCATGTGCGGGTGGCCTGCCCGGAAGGGTACGAGCCAGACGCGGA
GGTAATGAAGAAGGTGCAAGGCCACGCGCAGAGGAAGGGAGGGTCGTTGA
TGATGACACGAGACCCAATGGCGGCCGTGGAGGGGGCGAATGTGGTGGTG
ACCGATACCTGGGTGAGTATGGGCCAGGAAGAGGAGTACGAGAAGCGGAT
GCGGGACTTTGAGGGTTTTCAGGTCAACAAAGCCATGATGGAGAAGGGGG
CAGGGAAGGAGGGAGGGAAAGCAGGGTGCGTGTTTTTGCATTGTCTCCCT
CGGCATCCGGAGGAGGTGACGGACGAGGTGTTTTATGATGAGGAAAGAAG
TCTGGTCTTCCCCGAGGCGGAGAATCGGATGTGGACGGTCATGGCCGTCA
TGCTTTCGTTGGTGGGGAAGTAGGAAAAAGGATTTAGGGAGGAAGGCAGG
GAGGGGGGACGGGAGGGGAGGAATACGGTGCGGACGGTTATATGTTTCGT
GGATGGGAAATAAGAAAGGGAGGGGAAAAGGGAGGAGGTAGAGATGAGGA
AGAGGACACGAAGAATAAAATTAAATGAAGGAGCCACCCAGTCTTGAGTC
TGTCTACCTTACTGTCGACCGTCAACCATCATCGAATGACAGACGAAACG
GCG
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protein sequence of NO04G04600.1

>NO04G04600.1-protein ID=NO04G04600.1-protein|Name=NO04G04600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MGGGDHAARYTSRRSHTSTGHSSAPERALIFFVIVHIHIGMLIPALILVS
LVFVLQQTTASSPTPCHKPTRPNMWARKLTRPFTAAGAVRLQEAGAGSGL
SGLGGATRAFQGVASLKGKHLMNIDELTDSELRGLLSLSAQLKATYKSSS
PSSLPRPLTGTSVSMIFQKRSTRTRVSTETGMAMLGGHALFLGPQDIQLG
VNESLRDTAAVLSRFNSLILARVFAHPDVQMLAKHSSVPVINALSDLYHP
LQALADLLTLEEHFGEGGMEGKVLAWVGDGNNVLHDLAMGAVRLGMHVRV
ACPEGYEPDAEVMKKVQGHAQRKGGSLMMTRDPMAAVEGANVVVTDTWVS
MGQEEEYEKRMRDFEGFQVNKAMMEKGAGKEGGKAGCVFLHCLPRHPEEV
TDEVFYDEERSLVFPEAENRMWTVMAVMLSLVGK*
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Synonyms
Publications