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Properties
| Property Name | Value |
|---|
| Product | ornithine mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100402g6.3860.mrna |
| Orig protein id | gnl|cribi|Naga_100402g6.3860 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:250921..254210 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1831 ID=rna1831|Name=rna1831|organism=Nannochloropsis gaditana|type=mRNA|length=2721bp
ATCAATCCCCGGTCCTTATTCGTCGATGACTGACCAGGACATACACGCAC
GATAGGGGCCCCGGTGCACGGTCGTGACGGAAAGCCGTGGGTTTGTGTTT
GGTTGACTTCAGACCTATCGTTGCTGCATGGCAAAGCCAAAAAATCTGTT
CATAAAGCTAATGTCTGCGGCCGGCACCGGGTAAGTCACGCAGCAAGAAA
GCGTTCAGATCGACAGGAAGACCGACGAGCACGCACACTTGGGTTATCAA
CTACCTTCCCATCGCATGTCACATCTTCACAGCTTCTTCTATGTCACGCG
CAAAAATCCTAAAAATGTGACAAGGAAACTCGCGCTAAGGAAGTACGACC
CAGTTGTCCGAAAGCACGTGCTTTTCACCGAGACAAAGCTGAGGTAGCGG
GTGCGGCATTGGCTTCATTTTGTCGTTGTAAAGTGTATGGCGAAGAATTA
AAGGCATGGGTAACGTGCCGTCTCTGAATTTATGACTACTGCCTTGCAGG
AGTGCATTCATCCTCTCTTGTTCTTTGCATTTCTGTTCGAGGATTGAAAA
AACCACGTTCCAAGTCTTATCATTTCAAATACTAAAGATTGAGGATGGGC
GCGAGCAACTTTAATCCCTCGAGTTCTTTGTTTGACATGTACGGCTCCCT
CATAAGAGCTTAGAGCTCTGTTATATCGCTACTACATTTTAGAAATTACG
CGGACAAGGGTGCACCTTCAATCCTACGAATAGCTCAAGCGCGAAACATT
GTCGGCCTTGTGATCGACACCCTTATTTATATTCTCTATTGTTCTCATTG
TAAAGACTCTGAACCAGATTGTGCGGTGAAGTTGTTACCTCTTCATGTCC
ACTCCGGCAACTTCATAGCACGCCAGCGCACCCCTCTACCTGTGTTGCTG
CAACATATCCACAGCTTGCCTTAACTATGAATGTCCTTTGCCATTCAAGG
TGCTGTCCCATGGGTGTATGTTTCAAGACTTGTTTTTGCGGCCTTTTTTT
CTCCCTCGTCCCTGGGGAGTTTTTCTCACGGCTTTGAAAAGTCAACTTTC
CGTTATACTTATTTGAGGTAAAATTGAGGACAAAACTAATTTCATGTGTT
GCCTAGAATAGAAAATTTCATACGAGCAGGTCGCAATCGTGGTTAACAAG
ATTCTTGGGGGGGGAATAAGGAGAAGGGGGGATGCAAACAAGGTGTCACA
TAGTTATGGGGTGGGGAGGTTTTCCTTTGATCGATCTTTACATACACTTC
TGCGGTAAATCTGCGACTTCGATGAAAGGTTAGCAATCTCCTTACATTTG
GTGACTGAATGTCTGCAGTCGGATGGATCTGCATGCAAATGCTAACTATA
CTTCTTTCGCTTCCTAAAACAGGATACTCTCGTAGGCTCCTTTCCCCCCG
GTCACTCCACCATGTGGGCACTTAAGCTGTCCCGTCCTTTCATGGAGTGT
CACACGCGACATCTAAAGCCAAATTTGCTTGCAAACGGATACGGGCTCTG
GGCGCGGGAGGGAGGCATGCGCTCTTTTCAAGGCGTGGCCAGTCTGCAAG
GGAAAAACTTTATGAACATCGACGAACTCACGGACGTCGAGCTCCGGGAC
CTCCTTTCCCTTTCTGCTCAATTGAAGAAAGCCTATTCCTCGCCCAGTCC
TCCCGTCCTTCCTCGGCCGTGCGAGGGAAAAAGCGTCAGTATGATTTTCC
AAAAACGCAGTACGCGTACACGCGTATCGACCGAGACAGGCATGGCTCTT
CTGGGTGGCCACGCCTTGTTTCTGGGTCCACAAGATGTACAGTTGGGCGT
AAACGAGAGTATGCGGGACACGGCGAATGTGCTTTCCCGCTTCAATTCCC
TTATCCTCGCCCGAGTGTTCGCCCACACGGACGTCCAGCTCCTCGCGAAA
CATTCCAGCGTCCCCGTCATCAATGCCTTGTCCGATCTTTACCACCCTTT
GCAGGCCCTGGCCGATCTCCTGACCCTGGAGGAGCATTTTGGGAAGGGGA
GTTTACAGGGGAAAGTTCTGACATGGGTAGGTGACGGGAACAACGTCCTG
CACGATCTGGCCATGGGCGCAGCTCGTCTGGGTATGCACGTGCGGGTAGC
CTGTCCCGTCGGCTACGAGCCCAACGGCGAAATTATGCACCGGGTGGAGT
GGCACGCCCAGCGGTCGGGGGGGTCGTATGTGATGGAAAGAGACCCGATG
ACGGCCGTCGCGGGCGCGCACGTGATCGTGACGGACACCTGGGTGAGCAT
GGGCCAAGAGGAGGAGTACGAGAGGCGGATGCGGGATTTTGAGGGCTTTC
AGGTGACGAGACGCATGATGGAGCATGGGGCCAAGGGGTCAAATGCCGGG
CGGCCGGCCTGCGTGTTCTTGCACTGCCTGCCCCGCCATCCCGAGGAGGT
GACGGACGAGGTCTTTTACGACCCCGCACGGAGTTTGGTGTTCCCAGAGG
CGGAAAACCGGATGTGGACGGTCATGGCCGTCATGCTTTCGTTGGTGGGG
GGGGGGGGAAGAGGGTGTGAGGTGGGAGAGAGTCACAACGGTGGGGGGGG
GAGAAGGAGTAGCTGACAGGCAAAGGGCAAACAATGGCGGGGGACAATCC
CAACTAAATGACCACAGCTCAAGGCAAAACTTCAGGGCTTTTCTTGCTTG
CGGCTGCCTCTCCTTTGGAAGAAACCGGGCGTCTTGTCTAGTCAAAGTAG
AAACTCTCCGGGCGGCGTTGC back to topprotein sequence of rna1831 >rna1831-protein ID=rna1831-protein|Name=rna1831|organism=Nannochloropsis gaditana|type=polypeptide|length=384bp
MWALKLSRPFMECHTRHLKPNLLANGYGLWAREGGMRSFQGVASLQGKNF
MNIDELTDVELRDLLSLSAQLKKAYSSPSPPVLPRPCEGKSVSMIFQKRS
TRTRVSTETGMALLGGHALFLGPQDVQLGVNESMRDTANVLSRFNSLILA
RVFAHTDVQLLAKHSSVPVINALSDLYHPLQALADLLTLEEHFGKGSLQG
KVLTWVGDGNNVLHDLAMGAARLGMHVRVACPVGYEPNGEIMHRVEWHAQ
RSGGSYVMERDPMTAVAGAHVIVTDTWVSMGQEEEYERRMRDFEGFQVTR
RMMEHGAKGSNAGRPACVFLHCLPRHPEEVTDEVFYDPARSLVFPEAENR
MWTVMAVMLSLVGGGGRGCEVGESHNGGGGRRSS back to topmRNA from alignment at CM002458.1:250921..254210- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1831 ID=rna1831|Name=rna1831|organism=Nannochloropsis gaditana|type=mRNA|length=3290bp|location=Sequence derived from alignment at CM002458.1:250921..254210- (Nannochloropsis gaditana)
CGGTCCTTATTCGTCGATGACTGACCAGGACATACACGCACGATAGGGGC
CCCGGTGCACGGTCGTGACGGAAAGCCGTGGGTTTGTGTTTGGTTGACTT
CAGACCTATCGTTGCTGCATGGCAAAGGTAAGGCATCGCCTCCTCCATTA
TACTCAACCCCGTAGTTATGTTCCGCAAGCTTGGTCTTCCCGTCCTTGTC
TACGCACGTAGTGCCAAAAATATCTAACTTATCCCTTTCCCTGGCCAACA
TACTAGCCAAAAAATCTGTTCATAAAGCTAATGTCTGCGGCCGGCACCGG
GTAAGTCACGCAGCAAGAAAGCGTTCAGATCGACAGGAAGACCGACGAGC
ACGCACACTTGGGTTATCAACTACCTTCCCATCGCATGTCACATCTTCAC
AGCTTCTTCTATGTCACGCGCAAAAATCCTAAAAATGTGACAAGGAAACT
CGCGCTAAGGAAGGTAGGCAACATGAGATATTGATGGCATGTCTGGAGCC
TGACACGAGAAGGGTGGTTGGGGATTTATATAGCGTGAGGTGGGTGCGTG
AAGGCAAAGCTGTGTTAAGGAGTTTGCGAGATAAGGTTGAGTGAATTTTT
ACGCATTTATCTGAAATCATCGTCCTTTTCCCTTGTCTTTTACTGCTTTC
CTTCCCGAATGTTGCCCGTCAGTACGACCCAGTTGTCCGAAAGCACGTGC
TTTTCACCGAGACAAAGCTGAGGTAGCGGGTGCGGCATTGGCTTCATTTT
GTCGTTGTAAAGTGTATGGCGAAGAATTAAAGGCATGGGTAACGTGCCGT
CTCTGAATTTATGACTACTGCCTTGCAGGAGTGCATTCATCCTCTCTTGT
TCTTTGCATTTCTGTTCGAGGATTGAAAAAACCACGTTCCAAGTCTTATC
ATTTCAAATACTAAAGATTGAGGATGGGCGCGAGCAACTTTAATCCCTCG
AGTTCTTTGTTTGACATGTACGGCTCCCTCATAAGAGCTTAGAGCTCTGT
TATATCGCTACTACATTTTAGAAATTACGCGGACAAGGGTGCACCTTCAA
TCCTACGAATAGCTCAAGCGCGAAACATTGTCGGCCTTGTGATCGACACC
CTTATTTATATTCTCTATTGTTCTCATTGTAAAGACTCTGAACCAGATTG
TGCGGTGAAGTTGTTACCTCTTCATGTCCACTCCGGCAACTTCATAGCAC
GCCAGCGCACCCCTCTACCTGTGTTGCTGCAACATATCCACAGCTTGCCT
TAACTATGAATGTCCTTTGCCATTCAAGGTGCTGTCCCATGGGTGTATGT
TTCAAGACTTGTTTTTGCGGCCTTTTTTTCTCCCTCGTCCCTGGGGAGTT
TTTCTCACGGCTTTGAAAAGTCAACTTTCCGTTATACTTATTTGAGGTAA
AATTGAGGACAAAACTAATTTCATGTGTTGCCTAGAATAGAAAATTTCAT
ACGAGCAGGTCGCAATCGTGGTTAACAAGATTCTTGGGGGGGGAATAAGG
AGAAGGGGGGATGCAAACAAGGTGTCACATAGTTATGGGGTGGGGAGGTT
TTCCTTTGATCGATCTTTACATACACTTCTGCGGTAAATCTGCGACTTCG
ATGAAAGGTTAGCAATCTCCTTACATTTGGTGACTGAATGTCTGCAGTCG
GATGGATCTGCATGCAAATGCTAACTATACTTCTTTCGCTTCCTAAAACA
GGATACTCTCGTAGGCTCCTTTCCCCCCGGTCACTCCACCATGTGGGCAC
TTAAGCTGTCCCGTCCTTTCATGGAGTGTCACACGCGACATCTAAAGCCA
AATTTGCTTGCAAACGGATACGGGCTCTGGGCGCGGGAGGGAGGTTCGTT
CTTGGTTATAGGTTGAAAGTCTTGCCTCCGAGACCCTACATCTCTCTTCA
CCGTTGTACTTAAATCCTCCTTCCTTCTGTTCGTGGCTACCGGTTGAAAG
CGTACATCGTCTTCACCCTTAGTTAGGACTCTTTTCGTTCAAGTCATGCG
TTGGATTGTTCATGTGTTGCGTATACCTCCTAGCTCCTCACGACTCCATT
CCAACTCATTTTTGAATTTACAACCGCGTCCAGGCATGCGCTCTTTTCAA
GGCGTGGCCAGTCTGCAAGGGAAAAACTTTATGAACATCGACGAACTCAC
GGACGTCGAGCTCCGGGACCTCCTTTCCCTTTCTGCTCAATTGAAGAAAG
CCTATTCCTCGCCCAGTCCTCCCGTCCTTCCTCGGCCGTGCGAGGGAAAA
AGCGTCAGTATGATTTTCCAAAAACGCAGTACGCGTACACGCGTATCGAC
CGAGACAGGCATGGCTCTTCTGGGTGGCCACGCCTTGTTTCTGGGTCCAC
AAGATGTACAGTTGGGCGTAAACGAGAGTATGCGGGACACGGCGAATGTG
CTTTCCCGCTTCAATTCCCTTATCCTCGCCCGAGTGTTCGCCCACACGGA
CGTCCAGCTCCTCGCGAAACATTCCAGCGTCCCCGTCATCAATGCCTTGT
CCGATCTTTACCACCCTTTGCAGGCCCTGGCCGATCTCCTGACCCTGGAG
GAGCATTTTGGGAAGGGGAGTTTACAGGGGAAAGTTCTGACATGGGTAGG
TGACGGGAACAACGTCCTGCACGATCTGGCCATGGGCGCAGCTCGTCTGG
GTATGCACGTGCGGGTAGCCTGTCCCGTCGGCTACGAGCCCAACGGCGAA
ATTATGCACCGGGTGGAGTGGCACGCCCAGCGGTCGGGGGGGTCGTATGT
GATGGAAAGAGACCCGATGACGGCCGTCGCGGGCGCGCACGTGATCGTGA
CGGACACCTGGGTGAGCATGGGCCAAGAGGAGGAGTACGAGAGGCGGATG
CGGGATTTTGAGGGCTTTCAGGTGACGAGACGCATGATGGAGCATGGGGC
CAAGGGGTCAAATGCCGGGCGGCCGGCCTGCGTGTTCTTGCACTGCCTGC
CCCGCCATCCCGAGGAGGTGACGGACGAGGTCTTTTACGACCCCGCACGG
AGTTTGGTGTTCCCAGAGGCGGAAAACCGGATGTGGACGGTCATGGCCGT
CATGCTTTCGTTGGTGGGGGGGGGGGGAAGAGGGTGTGAGGTGGGAGAGA
GTCACAACGGTGGGGGGGGGAGAAGGAGTAGCTGACAGGCAAAGGGCAAA
CAATGGCGGGGGACAATCCCAACTAAATGACCACAGCTCAAGGCAAAACT
TCAGGGCTTTTCTTGCTTGCGGCTGCCTCTCCTTTGGAAGAAACCGGGCG
TCTTGTCTAGTCAAAGTAGAAACTCTCCGGGCGGCGTTGC back to topCoding sequence (CDS) from alignment at CM002458.1:250921..254210- >rna1831 ID=rna1831|Name=rna1831|organism=Nannochloropsis gaditana|type=CDS|length=2310bp|location=Sequence derived from alignment at CM002458.1:250921..254210- (Nannochloropsis gaditana)
GCATGCGCTCTTTTCAAGGCGTGGCCAGTCTGCAAGGGAAAAACTTTATG
AACATCGACGAACTCACGGACGTCGAGCTCCGGGACCTCCTTTCCCTTTC
TGCTCAATTGAAGAAAGCCTATTCCTCGCCCAGTCCTCCCGTCCTTCCTC
GGCCGTGCGAGGGAAAAAGCGTCAGTATGATTTTCCAAAAACGCAGTACG
CGTACACGCGTATCGACCGAGACAGGCATGGCTCTTCTGGGTGGCCACGC
CTTGTTTCTGGGTCCACAAGATGTACAGTTGGGCGTAAACGAGAGTATGC
GGGACACGGCGAATGTGCTTTCCCGCTTCAATTCCCTTATCCTCGCCCGA
GTGTTCGCCCACACGGACGTCCAGCTCCTCGCGAAACATTCCAGCGTCCC
CGTCATCAATGCCTTGTCCGATCTTTACCACCCTTTGCAGGCCCTGGCCG
ATCTCCTGACCCTGGAGGAGCATTTTGGGAAGGGGAGTTTACAGGGGAAA
GTTCTGACATGGGTAGGTGACGGGAACAACGTCCTGCACGATCTGGCCAT
GGGCGCAGCTCGTCTGGGTATGCACGTGCGGGTAGCCTGTCCCGTCGGCT
ACGAGCCCAACGGCGAAATTATGCACCGGGTGGAGTGGCACGCCCAGCGG
TCGGGGGGGTCGTATGTGATGGAAAGAGACCCGATGACGGCCGTCGCGGG
CGCGCACGTGATCGTGACGGACACCTGGGTGAGCATGGGCCAAGAGGAGG
AGTACGAGAGGCGGATGCGGGATTTTGAGGGCTTTCAGGTGACGAGACGC
ATGATGGAGCATGGGGCCAAGGGGTCAAATGCCGGGCGGCCGGCCTGCGT
GTTCTTGCACTGCCTGCCCCGCCATCCCGAGGAGGTGACGGACGAGGTCT
TTTACGACCCCGCACGGAGTTTGGTGTTCCCAGAGGCGGAAAACCGGATG
TGGACGGTCATGGCCGTCATGCTTTCGTTGGTGGGGGGGGGGGGAAGAGG
GTGTGAGGTGGGAGAGAGTCACAACGGTGGGGGGGGGAGAAGGAGTAGCT
GAATGTGGGCACTTAAGCTGTCCCGTCCTTTCATGGAGTGTCACACGCGA
CATCTAAAGCCAAATTTGCTTGCAAACGGATACGGGCTCTGGGCGCGGGA
GGGAGGCATGCGCTCTTTTCAAGGCGTGGCCAGTCTGCAAGGGAAAAACT
TTATGAACATCGACGAACTCACGGACGTCGAGCTCCGGGACCTCCTTTCC
CTTTCTGCTCAATTGAAGAAAGCCTATTCCTCGCCCAGTCCTCCCGTCCT
TCCTCGGCCGTGCGAGGGAAAAAGCGTCAGTATGATTTTCCAAAAACGCA
GTACGCGTACACGCGTATCGACCGAGACAGGCATGGCTCTTCTGGGTGGC
CACGCCTTGTTTCTGGGTCCACAAGATGTACAGTTGGGCGTAAACGAGAG
TATGCGGGACACGGCGAATGTGCTTTCCCGCTTCAATTCCCTTATCCTCG
CCCGAGTGTTCGCCCACACGGACGTCCAGCTCCTCGCGAAACATTCCAGC
GTCCCCGTCATCAATGCCTTGTCCGATCTTTACCACCCTTTGCAGGCCCT
GGCCGATCTCCTGACCCTGGAGGAGCATTTTGGGAAGGGGAGTTTACAGG
GGAAAGTTCTGACATGGGTAGGTGACGGGAACAACGTCCTGCACGATCTG
GCCATGGGCGCAGCTCGTCTGGGTATGCACGTGCGGGTAGCCTGTCCCGT
CGGCTACGAGCCCAACGGCGAAATTATGCACCGGGTGGAGTGGCACGCCC
AGCGGTCGGGGGGGTCGTATGTGATGGAAAGAGACCCGATGACGGCCGTC
GCGGGCGCGCACGTGATCGTGACGGACACCTGGGTGAGCATGGGCCAAGA
GGAGGAGTACGAGAGGCGGATGCGGGATTTTGAGGGCTTTCAGGTGACGA
GACGCATGATGGAGCATGGGGCCAAGGGGTCAAATGCCGGGCGGCCGGCC
TGCGTGTTCTTGCACTGCCTGCCCCGCCATCCCGAGGAGGTGACGGACGA
GGTCTTTTACGACCCCGCACGGAGTTTGGTGTTCCCAGAGGCGGAAAACC
GGATGTGGACGGTCATGGCCGTCATGCTTTCGTTGGTGGGGGGGGGGGGA
AGAGGGTGTGAGGTGGGAGAGAGTCACAACGGTGGGGGGGGGAGAAGGAG
TAGCTGAATGTGGGCACTTAAGCTGTCCCGTCCTTTCATGGAGTGTCACA
CGCGACATCTAAAGCCAAATTTGCTTGCAAACGGATACGGGCTCTGGGCG
CGGGAGGGAG back to top
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