Naga_100033g52, gene121 (gene) Nannochloropsis gaditana

Overview
NameNaga_100033g52
Unique Namegene121
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:329552..331743 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100033g52
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:329552..331743 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01070NO02G01070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna124rna124Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna125rna125Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna126rna126Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna127rna127Nannochloropsis gaditana (N. gaditana B-31)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna124rna124-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna125rna125-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna126rna126-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna127rna127-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

protein sequence of rna124

>rna124-protein ID=rna124-protein|Name=rna124|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MYEPVNVAPQSTPSLGPKRNTGTWPRARCSPAADAILLMLGMNPLNTLGA
VNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVY
PDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQC
VASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVK
VDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNY
ICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDA
LRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
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protein sequence of rna125

>rna125-protein ID=rna125-protein|Name=rna125|organism=Nannochloropsis gaditana|type=polypeptide|length=250bp
MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNR
VCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLT
SLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQK
VLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLR
LSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
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protein sequence of rna126

>rna126-protein ID=rna126-protein|Name=rna126|organism=Nannochloropsis gaditana|type=polypeptide|length=250bp
MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNR
VCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLT
SLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQK
VLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLR
LSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
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protein sequence of rna127

>rna127-protein ID=rna127-protein|Name=rna127|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MRTTNCNVRLVNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETAL
MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNR
VCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLT
SLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQK
VLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLR
LSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
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Synonyms
Publications