NO02G01070, NO02G01070 (gene) Nannochloropsis oceanica

Overview
NameNO02G01070
Unique NameNO02G01070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2663
Alignment locationchr2:334161..336823 +

Link to JBrowse

Properties
Property NameValue
DescriptionCell differentiation, Rcd1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:334161..336823 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006402mRNA catabolic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0030014CCR4-NOT complex
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR007216Rcd1
Homology
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: EWM30583.1 (Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 534.6 bits (1376), Expect = 1.900e-148
Identity = 275/301 (91.36%), Postives = 286/301 (95.02%), Query Frame = 0 
Query:    1 MLGMNPLSSLGGVGVGPSAQTGGLTGGGPGGYEELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISEG 302
            MLGMNPL++LG V V   AQ+  L GGG   YEEL PLV+QLSE  KRETALMELSKKREVYPDLAP+LWHSVGTMAALLQEIIAIYPML+PPTLTAQASNRVCNALALLQCVASH ETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVK+DD+EVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQK+LLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTF+QCLKDDVTINRWLANLLYNI+EG
Sbjct:   39 MLGMNPLNTLGAVNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEG 339
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: EWM30584.1 (Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 517.7 bits (1332), Expect = 2.400e-143
Identity = 266/289 (92.04%), Postives = 275/289 (95.16%), Query Frame = 0 
Query:   13 VGVGPSAQTGGLTGGGPGGYEELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISEG 302
            V V   AQ+  L GGG   YEEL PLV+QLSE  KRETALMELSKKREVYPDLAP+LWHSVGTMAALLQEIIAIYPML+PPTLTAQASNRVCNALALLQCVASH ETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVK+DD+EVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQK+LLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTF+QCLKDDVTINRWLANLLYNI+EG
Sbjct:   11 VNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEG 299
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: EWM30585.1 (Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana] >EWM30586.1 Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 477.6 bits (1228), Expect = 2.800e-131
Identity = 241/249 (96.79%), Postives = 248/249 (99.60%), Query Frame = 0 
Query:   53 MELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISEG 302
            MELSKKREVYPDLAP+LWHSVGTMAALLQEIIAIYPML+PPTLTAQASNRVCNALALLQCVASH ETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVK+DD+EVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQK+LLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTF+QCLKDDVTINRWLANLLYNI+EG
Sbjct:    1 MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEG 249
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: XP_009037094.1 (hypothetical protein AURANDRAFT_69805 [Aureococcus anophagefferens] >EGB08375.1 hypothetical protein AURANDRAFT_69805 [Aureococcus anophagefferens])

HSP 1 Score: 425.6 bits (1093), Expect = 1.300e-115
Identity = 218/276 (78.99%), Postives = 247/276 (89.49%), Query Frame = 0 
Query:   28 GPGGYEELTPLVMQLSEPDK---RETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISE 301
            G    EEL PLV+QL+ PD    RE+AL+ELSKKRE + DLAPILWHS GTM  LLQEI++IYPMLSPP LTA ASNRVCNALALLQCVASH ETRGLFL AH+P+YLYPFLNTV SK+RPFEYLRLTSLGV+GALVKMDDS+VI+FLLQTEIIPLCLRIMETG+ELSKTVATFIVQKILLD+MGLNY+CATAERF+AVSTVL+NMV  L+E PS+RLLKHIVRCYLRLS+N RAR+ALRQCLP++LR D TFA  +KDD+T+ RWL++LLYNISE
Sbjct:    2 GEKSVEELYPLVLQLTVPDSPEHRESALLELSKKRETFTDLAPILWHSFGTMGTLLQEIVSIYPMLSPPNLTAHASNRVCNALALLQCVASHPETRGLFLNAHVPLYLYPFLNTV-SKNRPFEYLRLTSLGVVGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLNYVCATAERFYAVSTVLANMVLTLVEQPSIRLLKHIVRCYLRLSDNLRAREALRQCLPESLR-DHTFAGHIKDDLTVKRWLSSLLYNISE 275
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: CBJ25574.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 416.8 bits (1070), Expect = 5.900e-113
Identity = 212/267 (79.40%), Postives = 241/267 (90.26%), Query Frame = 0 
Query:   34 ELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISE 301
            E T LV+QL+ PD+RE AL+ELSKKRE + DLAPILWHS GT++ALLQE++AIYP+LSPPTLT  ASNRVCNALALLQCVASH ETR LFL+AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVKMDD+EVI+FLLQTEIIPLCLRIMETG+ELSKTVATFIVQKILLDE GL YIC TAERF+AVSTVL NMV  L+E PSVRLLKH+VRCYLRLS+N RAR+ALRQCLPDALR++ TF   LKDDV++ RWL +LL+N++E
Sbjct:   67 EDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNN-TFTNVLKDDVSVKRWLTSLLFNLTE 331
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: KOO32309.1 (cell differentiation protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 416.8 bits (1070), Expect = 5.900e-113
Identity = 211/270 (78.15%), Postives = 244/270 (90.37%), Query Frame = 0 
Query:   33 EELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISEGV 303
            +++  LV++L+ PD+RETAL+ELSK+RE +PDLAPILWHS GT++ALLQEI+AIYP+LSPP LTAQASNRVCNALALLQCVASH +TR LFL AHIP++LYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DD++VI+FLL TEIIPLCLRIMETG+ELSKTVATFIVQKILLDE GL YICATAERF+AVSTVL+N+V AL+E PS RLLKHIVRC+LRLS+N RAR+ALRQCLPDALR D TF+ CLKDDVT  RW   LL+NI+E V
Sbjct:   22 DKIFVLVLELTNPDQRETALLELSKRRETFPDLAPILWHSFGTVSALLQEIVAIYPLLSPPALTAQASNRVCNALALLQCVASHPDTRTLFLNAHIPLFLYPFLNTV-SKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLANLVGALVEQPSGRLLKHIVRCFLRLSDNARAREALRQCLPDALR-DATFSACLKDDVTTKRWHTQLLFNITESV 289
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: GAY02910.1 (cell differentiation protein rcd1 [Pythium insidiosum])

HSP 1 Score: 416.8 bits (1070), Expect = 5.900e-113
Identity = 213/269 (79.18%), Postives = 240/269 (89.22%), Query Frame = 0 
Query:   31 GYEELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNIS 300
            G E+L  LV++LS P++RETAL+ELSKKRE +P+LAPILWHS GT+AALLQEI++IYP+LSPP LTA ASNRVCNALALLQCVASHAETR  FL AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DDS+VI+FLLQTEIIPLCLRIME G+ELSKTVATFIVQKILLDEMGL YIC T ERF+AV TVLS MV  L+E P+ RLLKHI+RCYLRLS+NPRA+DALRQCLPDALR ++TF   LKDD T +RWLA LLYNIS
Sbjct:    3 GPEQLYALVLELSSPEQRETALLELSKKREEFPELAPILWHSFGTVAALLQEIVSIYPLLSPPQLTAHASNRVCNALALLQCVASHAETRTHFLNAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKIDDSDVINFLLQTEIIPLCLRIMEAGSELSKTVATFIVQKILLDEMGLTYICHTPERFYAVGTVLSKMVNVLVETPAPRLLKHIIRCYLRLSDNPRAKDALRQCLPDALR-NRTFEMALKDDPTTSRWLAQLLYNIS 269
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: XP_005768296.1 (hypothetical protein EMIHUDRAFT_414254 [Emiliania huxleyi CCMP1516] >XP_005788958.1 hypothetical protein EMIHUDRAFT_455065 [Emiliania huxleyi CCMP1516] >EOD15867.1 hypothetical protein EMIHUDRAFT_414254 [Emiliania huxleyi CCMP1516] >EOD36529.1 hypothetical protein EMIHUDRAFT_455065 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 413.3 bits (1061), Expect = 6.500e-112
Identity = 208/268 (77.61%), Postives = 241/268 (89.93%), Query Frame = 0 
Query:   33 EELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISE 301
            E++  LV++L+ P++RE AL+ELSK+RE + DLAPILWHS GT++ALLQEI+AIYP+LSPP+LTAQASNRVCNALALLQCVASH ETR LFL AHIP++LYPFLNT+ SK+RPFEYLRLTSLGVIGALVK+DD +VI+FLL TEIIPLCLRIMETG+ELSKTVATFIVQKILLDE GL YICATAERF+AVSTVL N+V +L++ PS RLLKHIVRCYLRLS+NPRAR+ALRQCLPD LR D TF+ CLKDDVT  RWL  LL+NI+E
Sbjct:   18 EKIFHLVLELTNPEQREAALLELSKRRETFIDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTI-SKTRPFEYLRLTSLGVIGALVKVDDPDVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVDQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDVLR-DATFSACLKDDVTTKRWLTQLLFNITE 283
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: OWZ21802.1 (Cell differentiation protein rcd1 [Phytophthora megakarya])

HSP 1 Score: 410.2 bits (1053), Expect = 5.500e-111
Identity = 209/267 (78.28%), Postives = 239/267 (89.51%), Query Frame = 0 
Query:   33 EELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNIS 300
            E+L  LV++LS P++RE+AL+ELSKKRE +P+LAPILWHS GT+AALLQEI+AIYP+LSPP LTA ASNRVCNALALLQCVASHAETR  FL AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DDS+VI+FLLQTEIIPLCLRIME G+ELSKTVATFIVQKILLD+MGL YIC T ERF+AV TVLS MV  L+E P+ RLLKHI+RCYLRLS+NPRA++ALRQCLP+ALR + TF + LKDD T +RWLA LLYNIS
Sbjct:    5 EQLYALVLELSSPEQRESALLELSKKREEFPELAPILWHSFGTVAALLQEIVAIYPLLSPPQLTAHASNRVCNALALLQCVASHAETRTHFLNAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKIDDSDVINFLLQTEIIPLCLRIMEAGSELSKTVATFIVQKILLDDMGLTYICHTPERFYAVGTVLSKMVATLVEAPAPRLLKHIIRCYLRLSDNPRAKEALRQCLPEALR-NHTFDEGLKDDATTSRWLAQLLYNIS 269
[Close]
BLAST of NO02G01070 vs. NCBI_GenBank
Match: XP_009527321.1 (hypothetical protein PHYSODRAFT_559218 [Phytophthora sojae] >EGZ18263.1 hypothetical protein PHYSODRAFT_559218 [Phytophthora sojae])

HSP 1 Score: 408.7 bits (1049), Expect = 1.600e-110
Identity = 207/267 (77.53%), Postives = 239/267 (89.51%), Query Frame = 0 
Query:   33 EELTPLVMQLSEPDKRETALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNIS 300
            E+L  LV++LS P++RE+AL+ELSKKRE +P+LAPILWHS GT+AALLQEI+AIYP+LSPP LTA ASNRVCNALALLQCVASH+ETR  FL AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DDS+VI+FLLQTEIIPLCLRIME G+ELSKTVATFIVQKILLD+MGL YIC T ERF+AV TVLS MV  L+E P+ RLLKHI+RCYLRLS+NPRA++ALRQCLP+ALR + TF + LK+D T +RWLA LLYNIS
Sbjct:    3 EQLYALVLELSSPEQRESALLELSKKREEFPELAPILWHSFGTVAALLQEIVAIYPLLSPPQLTAHASNRVCNALALLQCVASHSETRTHFLNAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKIDDSDVINFLLQTEIIPLCLRIMEAGSELSKTVATFIVQKILLDDMGLTYICHTPERFYAVGTVLSKMVAVLVEAPAPRLLKHIIRCYLRLSDNPRAKEALRQCLPEALR-NHTFDEALKEDATTSRWLAQLLYNIS 267
The following BLAST results are available for this feature:
BLAST of NO02G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30583.11.900e-14891.36Cell differentiation, Rcd1-like protein [Nannochlo... [more]
EWM30584.12.400e-14392.04Cell differentiation, Rcd1-like protein [Nannochlo... [more]
EWM30585.12.800e-13196.79Cell differentiation, Rcd1-like protein [Nannochlo... [more]
XP_009037094.11.300e-11578.99hypothetical protein AURANDRAFT_69805 [Aureococcus... [more]
CBJ25574.15.900e-11379.40conserved unknown protein [Ectocarpus siliculosus][more]
KOO32309.15.900e-11378.15cell differentiation protein [Chrysochromulina sp.... [more]
GAY02910.15.900e-11379.18cell differentiation protein rcd1 [Pythium insidio... [more]
XP_005768296.16.500e-11277.61hypothetical protein EMIHUDRAFT_414254 [Emiliania ... [more]
OWZ21802.15.500e-11178.28Cell differentiation protein rcd1 [Phytophthora me... [more]
XP_009527321.11.600e-11077.53hypothetical protein PHYSODRAFT_559218 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006713NSK006713Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01070.1NO02G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G01070.2NO02G01070.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573796gene_686Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100033g52gene121Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01070.1NO02G01070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G01070.2NO02G01070.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01070 ID=NO02G01070|Name=NO02G01070|organism=Nannochloropsis oceanica|type=gene|length=2663bp
GTACCGTTGGTAGCAAACCCTTGTCAGTGTTGCGTAACAGCGCGTCTGTG
TGGAGGGGTGGAAAGAGGGGAGACGTGGAAAGCATTGAGAGCGTACACAT
GAGTGCTACGAAGGCATAAATTAGCACGCAAGGGCGTGTCAGTTGAATAG
AAGGAACAGAAGCTACAAGATGAAGAAGCAATCACAACACAGGCCAGCAG
GCTCGCCAGTGGCTGGACAATCCAGCTCGCTATGGTGAGAATTTAATCAA
GCCTTCATGTCCGTCAAATTAGGACATTTACGCTCTTGAAAGACCGATCG
ACGGCAAGCGGGCACGCGATGGTCCGAAAATTCATGCTTTTTTTCCGTCT
CCCTGAGACATTTTACTACTGCATGACACAAGGGCAAGCATGCCAGGAAT
CCGAGGTAGAGCACCACCGCCAAAGCCTTTTTTTTTGTTTTTTTTTATTA
AGAAAGTCAACGCAAATGACTGCATCGCTCATAGCATGCCCGTGTAATAA
GGAGTTTGATAAATCATTCAAGATACCCTTCATATTAGTGCCCCGGACAT
AACGCGAAGTTTTTGCAGTGCCGTCGTTGGAGATCCCCACTTGGCACGCT
GAGCGCGAAAAACGGAGAGGGGAGGGTCGGGGGGGAAAGACTCGGGAGGA
GGACTTGTGTCTTCTGGGAGATAAAGGTATTAACGACCACTCACCGTTCT
CTGCGTTGTATTCCACACACTGACACATACCCGACCGTGTGGCAGGCTGG
CCGGTGCTCCACGCCTCGCCCTTTATTCAGTTTGCGGTCCAAAGAACACT
CTTGGCATCATCATCATCATCGACATAATCCTCATAACTTCTCCACAACA
ATGCTGGGCATGAACCCTTTGAGCTCCTTAGGCGGAGgtacgtgcggcga
agccaaataaagaggatgagccgaaggagatatggcggtaggggaaggag
tgggcagggtgtggcttggcatgcccttccgcgtatctatctcccagtgg
aagggtaaagacaagaggggggtcgaaaaggcggggcaggcacatgcatg
tgcgcttctacgctttccctgtgatccccaaccccctgctctctcattca
ctcctctccttaaatcctcaatcgtcattgtcgaccgactaatgtctagt
gctaccatgctcttcactcacaccaaccaccctccgtcaaattaatatgc
atacatagTTGGAGTCGGTCCGTCCGCACAAACGGGTGGCTTGACCGGTG
GCGGCCCCGGAGGATATGAGGAATTGACGCCGTTGGTCATGCAGTTGTCG
GAGCCGGACAAGGTAAGGAACGAAGCAAAGCAAGCAAAAAAAAAAGGGCA
GACAGTATGAGAGAGATTGGAAAGTGAGAGTGGAGAGACAGGGGAACGAG
GCAAATGAATGGCCGTCAAGTATCTTGCATCCCCTCCCACACACTGTACG
TTTTCCCTTCTCTCCCTCCATCCCTCCCTCCTTCCCTCCCTCCTTCCATA
CCTCCCTCCCTCCCTCCCCTCCACCCAATCCACTCAGCGCGAAACCGCCC
TGATGGAATTGAGCAAGAAGCGTGAGGTCTATCCGGACCTGGCTCCCATC
CTCTGGCACTCTGTCGGAACCATGGCTGCCCTCCTTCAGGAAATTATTGC
CATTTACCCTATGCTTTCCCCCCCCACCCTAACGGCCCAAGCCAGCAACC
GTGTATGCAACGCCCTGGCCTTGCTGCAGTGTGTGGCGAGCCATGCTGAG
ACCAGGGGACTCTTTTTGCAAGgtcatgattaagtggggggagtgggagg
ggagggaggagggaggaggtagaagaggggcgcgcaccagggcaggcctt
gtaaatgcacctgaatttaaagctctcgttctcagtgaactaatattccc
acgccctctctctcttcctcccacccacttgatcgcctctttctccctta
gCGCACATTCCCATGTATCTGTACCCTTTCCTTAATACGGTCATGAGCAA
AAGTCGACCTTTCGAGTACCTGCGTCTCACGTCTCTAGGCGTGATAGGGG
CCTTGGTGAAGATGGACGATTCAGAGGTCATCTCCTTCCTCCTTCAGACC
GAAATAATTCCCCTGTGCCTCCGAATCATGGAGACGGGAAATGAATTGAG
CAAGACAGTGGCCACTTTTATCGTACAAAAAATCCTGCTTGATGAGATGG
GATTGAACTATATCTGCGCCACGGCCGAGCGCTTCTTTGCCGTGTCCACA
GTGCTGAGTAACATGGTGCAAGCGCTGATAGAGGTTCCTTCAGTGAGGCT
ACTCAAGCATATTGTCCGTTGTTATTTACGCCTGTCGGAGAATCCGAGAG
CGCGTGATGCGCTGCGACAGTGCTTGCCCGACGCTTTGAGGAGTGACCAG
ACGTTTGCGCAGTGTCTGAAGGATGATGTGACGATCAATCGCTGGTTGGC
GAACTTGCTGTATAACATTAGCGAGGGAGTTTAGTCTCGTGATAGGCATA
GACGGAGGGAGGAGTAAGTGGGGAGGAGTGCTGAGAGGAGGGGGAGGGAG
GGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAAAGTGACAGGGAATG
TATAGGGAAAATCTGCCAAAGAGACAAAAGAAAAGAGAAGCAAAATAACT
TACATGCATAGAG
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protein sequence of NO02G01070.1

>NO02G01070.1-protein ID=NO02G01070.1-protein|Name=NO02G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=303bp
MLGMNPLSSLGGVGVGPSAQTGGLTGGGPGGYEELTPLVMQLSEPDKRET
ALMELSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQAS
NRVCNALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLR
LTSLGVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIV
QKILLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCY
LRLSENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISE
GV*
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protein sequence of NO02G01070.2

>NO02G01070.2-protein ID=NO02G01070.2-protein|Name=NO02G01070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MAVKYLASPPTHCTFSLLSLHPSLLPSLLPYLPPSLPSTQSTQRETALME
LSKKREVYPDLAPILWHSVGTMAALLQEIIAIYPMLSPPTLTAQASNRVC
NALALLQCVASHAETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSL
GVIGALVKMDDSEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKIL
LDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLS
ENPRARDALRQCLPDALRSDQTFAQCLKDDVTINRWLANLLYNISEGV*
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Synonyms
Publications