NO30G00720, NO30G00720 (gene) Nannochloropsis oceanica

Overview
NameNO30G00720
Unique NameNO30G00720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1221
Alignment locationchr30:261534..262754 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:261534..262754 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00720.8NO30G00720.8Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.7NO30G00720.7Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.6NO30G00720.6Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.5NO30G00720.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.4NO30G00720.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.3NO30G00720.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.2NO30G00720.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00720.1NO30G00720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00720.8NO30G00720.8-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.7NO30G00720.7-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.6NO30G00720.6-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.5NO30G00720.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.4NO30G00720.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.3NO30G00720.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.2NO30G00720.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00720.1NO30G00720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00720 ID=NO30G00720|Name=NO30G00720|organism=Nannochloropsis oceanica|type=gene|length=1221bp
ATGCACGCCGAATTTTGTACATCCAGGATCAAAGGTGGTCCAATTTTCGT
TTTACAAAAGTCCTCAGAGTGTCGTAGTGGTGGCAATGTTACCACGCCCG
CTTTCTGTCGGATGGGCCGGGCAACAGCAACGACTTCCTACTTCCTCCTC
TCTTTCTCTCTCCATTCACCCCCTTCGTGCTTCTTGCATTGCACAGTCAT
GCCCGGATTCTCAAAGCACAAGAACAACACAATATGTACACATGTATACA
GGACATGCGATTGGTTTACGGGTGCGGCGGCTGCGCATATGTTTCCTGGC
CTGCATCGTTCACAAGCGAGTATCTTGGTCCTCCGTACCCTCCCTCCGTG
CTTTCCCAAGAACGCAGCACTCCGCCGTAGGAAGCCGGTCCTCTACATGT
TCACCTTCATGATGCGAGCTGGGCTGGTGACGCTGGTGGTGCCTGAGCTT
GGTGGGAATGGCCAAGGAATGTGGTGGCCTCCAACCTTCCCTCCTGCTAC
TATAAGGTTGCAACTCCGAGTGCCACCGCCCTTGTGTGGGCTGCTGCTGC
TCCTGCTACTGCCTGATAGTTCCTCAGTGCTGCTGCTGGAGCAGTTGCTG
CTGAATATCATCCACCTATCCCTCCGGCATCTCGCCACACAAGTCAGgta
tgaatttctcccgtttcagtgaatcaaagagagacatgacatttagagga
gaagtgatttccaacagtctattctttactataaccagAGCCTCATCCTC
TCGAGGATCAGGGCAAAGGATCGAAACAAGAAGAGTCTGATCTCCTCCTC
CGAATCCCTTCCCCCCTCTCCGCTTACTTCCTCCCGCCCCATCTCCCTCA
TGGCCCATCCTTTTATCTGTCAATCGAGCAAAAAAATAATGTCTAATGGA
AGATTGGCAAGAGGgtacgcgaaaagccatacgtacgggtacagtgcaag
agcgaggtctgcatctgcatctaatcctctcttcctccctctcaccttcc
ctccttccatccctcctgcccctttctccctctcctacgtagCCTAGGAG
AAGATGCCCGGCGGAAAGATAACGAGGAAAGCCCAGAAGGTGGTACGAGT
GGTTGTTGACTCGGCGGATATCGACGGTCAGCAGGGGCAGCAACTTGGCG
CGAGCAAGAGGAACATAGAATCGGGGAATGTGTAACGGATGGAAGTTAAT
CATATAAATAAATAACATTGG
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protein sequence of NO30G00720.8

>NO30G00720.8-protein ID=NO30G00720.8-protein|Name=NO30G00720.8|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVSLGEDARRKDNEESPEGGTSGC*
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protein sequence of NO30G00720.7

>NO30G00720.7-protein ID=NO30G00720.7-protein|Name=NO30G00720.7|organism=Nannochloropsis oceanica|type=polypeptide|length=224bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVRYEFLPFQ*
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protein sequence of NO30G00720.6

>NO30G00720.6-protein ID=NO30G00720.6-protein|Name=NO30G00720.6|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVRASSSRGSGQRIETRRV*
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protein sequence of NO30G00720.5

>NO30G00720.5-protein ID=NO30G00720.5-protein|Name=NO30G00720.5|organism=Nannochloropsis oceanica|type=polypeptide|length=224bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVRYEFLPFQ*
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protein sequence of NO30G00720.4

>NO30G00720.4-protein ID=NO30G00720.4-protein|Name=NO30G00720.4|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVSKKIMSNGRLARGYAKSHTYGLGEDARRKDNEESP
EGGTSGC*
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protein sequence of NO30G00720.3

>NO30G00720.3-protein ID=NO30G00720.3-protein|Name=NO30G00720.3|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVRASSSRGSGQRIETRRV*
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protein sequence of NO30G00720.2

>NO30G00720.2-protein ID=NO30G00720.2-protein|Name=NO30G00720.2|organism=Nannochloropsis oceanica|type=polypeptide|length=250bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVSKKIMSNGRLARGLGEDARRKDNEESPEGGTSGC*
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protein sequence of NO30G00720.1

>NO30G00720.1-protein ID=NO30G00720.1-protein|Name=NO30G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MHAEFCTSRIKGGPIFVLQKSSECRSGGNVTTPAFCRMGRATATTSYFLL
SFSLHSPPSCFLHCTVMPGFSKHKNNTICTHVYRTCDWFTGAAAAHMFPG
LHRSQASILVLRTLPPCFPKNAALRRRKPVLYMFTFMMRAGLVTLVVPEL
GGNGQGMWWPPTFPPATIRLQLRVPPPLCGLLLLLLLPDSSSVLLLEQLL
LNIIHLSLRHLATQVRASSSRGSGQRIETRRV*
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Synonyms
Publications