NO24G01500, NO24G01500 (gene) Nannochloropsis oceanica

Overview
NameNO24G01500
Unique NameNO24G01500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2385
Alignment locationchr24:398370..400754 -

Link to JBrowse

Properties
Property NameValue
DescriptionRadical sam domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:398370..400754 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR034422HydE/PylB-like
IPR007197rSAM
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
GO:0005488binding
GO:0003824catalytic activity
Homology
BLAST of NO24G01500 vs. NCBI_GenBank
Match: EWM24357.1 (radical sam domain protein [Nannochloropsis gaditana])

HSP 1 Score: 592.8 bits (1527), Expect = 9.200e-166
Identity = 299/426 (70.19%), Postives = 353/426 (82.86%), Query Frame = 0
Query:   47 RTRPPAATAQCQHD-------AQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTTQDGALVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            R RP + T +   D       A+  ++PL  FLG+++L+ G+ +D+S+ QL ELLTT D  L++++Y++AEAATTAYFG+KVYARGIVEFSNVCTKDC YCGIRKH KVHRYTMTK+EI+ CAEFAY+QGMGTLMLQSGELP+PERINFMLDVVRA+R RT+++  E  P      PSA     PN     SQRGLAVALSLGELPS  Y+AF EAGASRYLLRIE+SNP LY +LHP SHSF++RR+CL EL+RIGFQVGTGVMVGVP+Q VED A DLLFFKE DPDMIGLGPYIVQ++TPLG+++L E    SA + E  R+ LLERTTRMYALAR++LGNVNIAATTAL+ALDP+GRELALRRGANVVMPIITPQRLR +Y+IYENKPGIDQDAL+STACL+ RV++AGK+LLLDG WHDPP
Sbjct:   58 RQRPLSVTIRYASDKGTARGGAEPLWSPLKDFLGLDRLDTGQKLDISRRQLTELLTTNDRTLIKSMYAVAEAATTAYFGTKVYARGIVEFSNVCTKDCFYCGIRKHTKVHRYTMTKEEILACAEFAYSQGMGTLMLQSGELPSPERINFMLDVVRAIRRRTMDLACESPP-----FPSAG----PNQRDFPSQRGLAVALSLGELPSSVYQAFLEAGASRYLLRIETSNPTLYTRLHPASHSFQARRKCLEELQRIGFQVGTGVMVGVPFQTVEDQANDLLFFKELDPDMIGLGPYIVQSQTPLGKLWLEEHGEESAAKQEANRVALLERTTRMYALARIMLGNVNIAATTALEALDPEGRELALRRGANVVMPIITPQRLRGQYEIYENKPGIDQDALDSTACLERRVRMAGKDLLLDGGWHDPP 474          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: EWM24358.1 (radical sam domain protein [Nannochloropsis gaditana])

HSP 1 Score: 539.7 bits (1389), Expect = 9.300e-150
Identity = 268/351 (76.35%), Postives = 303/351 (86.32%), Query Frame = 0
Query:  115 AYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            AYFG+KVYARGIVEFSNVCTKDC YCGIRKH KVHRYTMTK+EI+ CAEFAY+QGMGTLMLQSGELP+PERINFMLDVVRA+R RT+++  E  P      PSA     PN     SQRGLAVALSLGELPS  Y+AF EAGASRYLLRIE+SNP LY +LHP SHSF++RR+CL EL+RIGFQVGTGVMVGVP+Q VED A DLLFFKE DPDMIGLGPYIVQ++TPLG+++L E    SA + E  R+ LLERTTRMYALAR++LGNVNIAATTAL+ALDP+GRELALRRGANVVMPIITPQRLR +Y+IYENKPGIDQDAL+STACL+ RV++AGK+LLLDG WHDPP
Sbjct:   27 AYFGTKVYARGIVEFSNVCTKDCFYCGIRKHTKVHRYTMTKEEILACAEFAYSQGMGTLMLQSGELPSPERINFMLDVVRAIRRRTMDLACESPP-----FPSAG----PNQRDFPSQRGLAVALSLGELPSSVYQAFLEAGASRYLLRIETSNPTLYTRLHPASHSFQARRKCLEELQRIGFQVGTGVMVGVPFQTVEDQANDLLFFKELDPDMIGLGPYIVQSQTPLGKLWLEEHGEESAAKQEANRVALLERTTRMYALARIMLGNVNIAATTALEALDPEGRELALRRGANVVMPIITPQRLRGQYEIYENKPGIDQDALDSTACLERRVRMAGKDLLLDGGWHDPP 368          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: XP_004344718.1 (radical SAM domain containing protein [Acanthamoeba castellanii str. Neff] >ELR20975.1 radical SAM domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 405.2 bits (1040), Expect = 2.700e-109
Identity = 212/403 (52.61%), Postives = 273/403 (67.74%), Query Frame = 0
Query:   62 QASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTTQDGALVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDP 465
            +   APLA  +G   L PG  + L KEQ++ +L T D  L  ALY  A+  T  YFG K+Y RGIVEFSNVCTKDC YCGIRKH++V RY+M+K+EIV CA FAY  G G+LMLQSGELPT +R+ F++D ++ V+  T+E D E +                        + L VA+SLGEL  + +++  EAGA RYLLRIESSNP LY KLHP  HS+  R +CL EL  +GFQVGTGVM+G+P Q + D+A DLLFFK  D DMIG+GPYI Q  TPLG+++  E  +   +   ++   L   +T+M ALAR+I G+VNIAATTALQA++PQGRE+AL +GAN++MPI+TP++ RE+YQ+YE KP ID+ A E  +CL  RVQ AGKEL L   W DP
Sbjct:   68 EEKIAPLASLVG-RALTPGEPLTLEKEQIVHILQTADEGLENALYDYADTVTQRYFGKKIYFRGIVEFSNVCTKDCYYCGIRKHIQVKRYSMSKEEIVNCAIFAYESGYGSLMLQSGELPTDKRLAFLVDTIKEVKRVTIEKDKERN----------------GVKEGVENKSLGVAISLGELTKDMFRSLREAGAHRYLLRIESSNPDLYAKLHPADHSWHRRVECLRELNELGFQVGTGVMIGLPGQTLGDLAQDLLFFKSMDIDMIGMGPYICQKDTPLGKLWQEENSNLDTKRYNEK---LFRLSTKMVALARIICGDVNIAATTALQAINPQGREVALNQGANMLMPILTPRKYREDYQLYEGKPCIDEGAEECRSCLKNRVQWAGKELTLHD-WGDP 449          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: AGA37362.2 (mitochondrial hydrogenase maturation protein, partial [Mastigamoeba balamuthi])

HSP 1 Score: 376.7 bits (966), Expect = 1.000e-100
Identity = 204/412 (49.51%), Postives = 274/412 (66.50%), Query Frame = 0
Query:   62 QASFAPLAHFLGVEK--LEPGRIIDLSKEQLMELLTTQDGALVQA-LYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHM---KVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPS--HSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            + SF  +   LG+ +  ++PG+ +DL++ QL +LL+  DG+  +A L+ LAE      +G+KVY RGIVEFSNVC K+C YCGIR+ M    + RYTM   EIV CA +A  Q +GT+MLQSGE+  P RIN+++DV+  +R R++E D  VH                       ++G+AVALS+GE   + Y+  +EAG  R+LLRIESSNP+LY  LHP    H++E R  CL +L R+GFQ+GTGVM+G+P Q   D+AGD+LFFKE D DMIG+GPY+VQA TP G+V+    + H  E+ E+    LL  ++RM AL R+ LG+ NIAATTALQA+ P GREL LRRGAN++MPI+TP + REEYQ+YE KP I + A E+ A L  RV +AGKE + D  W DPP
Sbjct:   26 RTSFPSIERVLGLPRGHVQPGQTLDLNRIQLTDLLSANDGSETEAELFDLAETIVNRVYGNKVYLRGIVEFSNVCEKNCNYCGIRREMPKQALPRYTMPDNEIVECALWAQKQRLGTVMLQSGEVSHPSRINWLIDVITQIRSRSIEAD-TVH-----------------------KKGVAVALSVGEQSYDVYRRLFEAGGRRFLLRIESSNPLLYRSLHPADGMHTWEKRMSCLRDLGRVGFQLGTGVMIGLPQQSNWDLAGDILFFKEIDADMIGMGPYVVQADTPTGKVW---TELHGREDREEYNRRLLALSSRMIALTRITLGDANIAATTALQAIHPTGRELCLRRGANLMMPILTPTKYREEYQLYEGKPSIHEAAEETHASLVRRVHVAGKE-VADDVWGDPP 409          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: PRW59379.1 (iron hydrogenase assembly [Chlorella sorokiniana])

HSP 1 Score: 373.2 bits (957), Expect = 1.100e-99
Identity = 206/411 (50.12%), Postives = 273/411 (66.42%), Query Frame = 0
Query:   61 AQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELL---TTQDGALV--QALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHM-KVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            A+ +   L  F G    +PG ++DLS +Q+  LL   +T +G+ V   AL++ AE+ +  +FG  VY RGIVEFSNVC  DC YCGIRKH  +  RYTM ++E+V  AE+A+   MGTLMLQSGEL TP+R+ ++ DVV++V+ RT+ +DLE      +  P A        L      GL VALS+GELP E +     AGA RYLLRIESSNP LY  +HPP+  +E+R +CL +LK +GF +GTGVMVG+P Q + D+AGD++FF++   DMIG+GPYI +A TP+  ++ AE  H    + +K  +D+L  TTRM ALAR+ LGNVNIAATTALQA+D  GRE+ALRRGANV+MPI+TP + RE Y +YE KP I   A E   CL+ R+ +  K  L  G W DPP
Sbjct:   61 AEEAVKVLGSFWGT-TFQPGDVLDLSVDQMEALLKATSTGEGSKVLDNALFAHAESVSDRFFGKDVYYRGIVEFSNVCENDCGYCGIRKHQRRARRYTMPREEVVEVAEWAFKHRMGTLMLQSGELNTPQRMAYLEDVVKSVKERTIALDLEER----AENPEARRPADATGL------GLCVALSVGELPREQFAQLRAAGADRYLLRIESSNPELYASIHPPAQKWENRVRCLRDLKDLGFMIGTGVMVGLPGQTLRDLAGDVMFFRDLGADMIGMGPYITEAGTPVADMWEAEFGH---LDKKKHMMDMLTLTTRMNALARVTLGNVNIAATTALQAIDAVGREVALRRGANVLMPILTPTKYREHYTLYEGKPCITDTAEECQKCLNARLSMVDKR-LKPGVWGDPP 456          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: XP_005849486.1 (hypothetical protein CHLNCDRAFT_142788 [Chlorella variabilis] >EFN57384.1 hypothetical protein CHLNCDRAFT_142788 [Chlorella variabilis])

HSP 1 Score: 366.7 bits (940), Expect = 1.100e-97
Identity = 207/421 (49.17%), Postives = 269/421 (63.90%), Query Frame = 0
Query:   61 AQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLT-TQDGA----LVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHM-KVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPS----------HSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            A+ +   L  F G     PG ++DLS +Q+  LL+ T  GA    L  AL++ AE+ T  +FG  VY RGIVEFSNVC  DC YCGIRKH  +  RYTM + E+V  A++A+   +GTLMLQSGEL TP+R+ ++ DVV AV+ RT  +D E       +LP  +  V           GL VALS+GELP E Y+   +AGA RYLLRIESSNP LY  +HPP+          H +E+R +CL +LK IGF +GTGVMVG+P Q + D+AGD++FF++   DMIG+GPYI +A TP+  ++    Q     + +K   D+L  TTRM ALAR+ LGNVNIAATTALQA+D  GRE+ALRRGANV+MPI+TP + RE Y +YE KP I   A E   CL+ R+ +  K+ L  G W DPP
Sbjct:   30 AEEAVKVLGSFWGT-TFAPGDVLDLSVDQMEGLLSATSTGAGSKVLDNALFAHAESVTGRFFGRDVYYRGIVEFSNVCENDCGYCGIRKHQRRARRYTMPRDEVVEVADWAFRHRLGTLMLQSGELNTPQRMKYLTDVVAAVKERTRALDAEQRLVDPEALPKDAAGV-----------GLCVALSVGELPREQYQQLKDAGADRYLLRIESSNPQLYASIHPPAQARASGPARFHKWENRTRCLRDLKDIGFMIGTGVMVGLPGQTLRDLAGDIMFFRDLGADMIGMGPYITEAGTPVADMW---EQQFGHVDKKKHMQDMLTLTTRMNALARITLGNVNIAATTALQAIDAVGREVALRRGANVLMPILTPTKYREHYTLYEGKPCITDTAEECQKCLNARLAMVDKK-LKPGVWGDPP 434          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: PSC71854.1 (iron hydrogenase assembly [Micractinium conductrix])

HSP 1 Score: 365.2 bits (936), Expect = 3.100e-97
Identity = 202/425 (47.53%), Postives = 267/425 (62.82%), Query Frame = 0
Query:   61 AQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTT-------------------QDGALVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHM-KVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            A+ +   L  F G     PG ++DL+  Q+  LL+                    + G L  AL++ AE+ +  +FG  VY RGIVEFSNVC  DC YCGIRKH  +  RYTM   E+V  A++A+   MGTLMLQSGEL TP+R+ ++++VV+AV+ RT  +D E      S LP  +  +           GL VALS+GELP E Y+   +AGA RYLLRIESSNP LY  +HPP+  +E+R +CL +LK IGF +GTGVMVG+P Q + D+AGD++FF++   DMIG+GPYI +A TP+  ++ A+ +        KE + L   TTRM ALAR+ LGNVNIAATTALQA+D  GRE+ALRRGANV+MPI+TP + RE Y +YE KP I   A E   CL+ R+ +  K+ L  G W DPP
Sbjct:   69 AEEAAKVLGSFWG-SSFRPGDVLDLTVNQMEALLSAITPASTRLPGAAAAPADAERAGLLDSALFAHAESVSNRFFGKDVYYRGIVEFSNVCENDCGYCGIRKHQRRARRYTMPADEVVEVADWAFKHRMGTLMLQSGELNTPQRLKYLVEVVQAVKARTQALDAEQRSLDPSQLPKDTTGL-----------GLCVALSVGELPREQYQTLRDAGADRYLLRIESSNPELYASIHPPAQKWENRVRCLRDLKDIGFMIGTGVMVGLPGQTLRDLAGDVMFFRDLGADMIGMGPYITEAGTPVADMWAAQFEGVDKGAHMKEMLTL---TTRMNALARVTLGNVNIAATTALQAIDAVGREIALRRGANVLMPILTPTKFREHYTLYEGKPCITDTAEECQKCLNARLSMVDKK-LRPGVWGDPP 477          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: AHH85810.1 (FeFe-hydrogenase assembly protein [Tetraselmis sp. GSL018])

HSP 1 Score: 357.8 bits (917), Expect = 5.000e-95
Identity = 200/415 (48.19%), Postives = 273/415 (65.78%), Query Frame = 0
Query:   61 AQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLT-------TQDGALVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHM-KVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKER--IDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            A A+ A ++  L +  + PG +++L+ +Q+  +L        T++  L  AL++ AE+ +  +FG KVY RGIVEFSNVC  DC YCGIRK+   VHRY+M+K+EI+  A  A+   MGTLMLQSGEL TP R++F+ DVVR +R +T+  DL       + L  A L+    NL  +   GL VALS+GELP E  +    +GASRYL+RIE+SNP L+ ++HP S + ESR +CL  +K  G Q+GTG+MVG+P Q ++D+A DL+FFK  D DMIG+GPYI     P    ++AE  +H    ++K+     +++ TTRM ALAR+ LGNVNIAATT+LQA++P GRELAL RGANVVMPI+TP   R +YQ+Y  KP +   A    +CL +R+   GKELL DG W DPP
Sbjct:   80 AAAAAAVISRHLNL-PVSPGDVLNLTADQIHGILEATTNEPGTKNSELNDALFAHAESVSRRFFGDKVYQRGIVEFSNVCENDCGYCGIRKYQPNVHRYSMSKEEILDVAMKAFDLKMGTLMLQSGELKTPRRLSFVNDVVREIRRKTILADL----MRKNDLTEALLT-NQENLQTAESIGLCVALSIGELPLEELQRLRASGASRYLVRIETSNPELFARIHPKSQTLESRVECLLNIKAAGLQLGTGLMVGLPGQTLKDLANDLVFFKNVDADMIGMGPYI-----PEDDTWVAEDFNHVNPGIDKKAHLESMVQLTTRMNALARITLGNVNIAATTSLQAINPLGRELALSRGANVVMPILTPTEQRAQYQLYPGKPCVSHGADGCASCLKMRIASVGKELLTDGSWSDPP 483          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: AHH85811.1 (FeFe-hydrogenase assembly protein [Tetraselmis sp. GSL018])

HSP 1 Score: 355.1 bits (910), Expect = 3.200e-94
Identity = 199/415 (47.95%), Postives = 273/415 (65.78%), Query Frame = 0
Query:   61 AQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLT-------TQDGALVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHM-KVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQHHSAEELEKER--IDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDPP 466
            A A+ A ++  L +  + PG +++L+ +Q+  +L        T++  L  AL++ AE+ +  +FG KVY RGIVEFSNVC  DC YCGIRK+   VHRY+M+K+EI+  A  A+   MGTLMLQSGEL TP R++F+ DVVR +R +T+  DL       + L  A L+    NL  +   GL VALS+GELP E  +    +GASRYL+RIE+SNP L+ ++HP S + ESR +CL  +K  G Q+GTG+MVG+P Q ++D+A DL+FFK  D DMIG+GPYI     P    ++AE  +     ++K+     +++ TTRM ALAR+ LGNVNIAATT+LQA++P GRELAL RGANVVMPI+TP   R +YQ+Y  KP +   A   ++CL +R+   GKELL DG W DPP
Sbjct:   80 AAAAAAVISRHLNL-PVSPGDVLNLTADQIHGILEATTNEPGTKNSELNDALFAHAESVSRRFFGDKVYQRGIVEFSNVCENDCGYCGIRKYQPNVHRYSMSKEEILDVAMKAFDLKMGTLMLQSGELKTPRRLSFVNDVVREIRRKTILADL----MRKNDLTEALLT-NQENLQTAESIGLCVALSIGELPLEELQRLRASGASRYLVRIETSNPELFARIHPKSQTLESRVECLLNIKAAGLQLGTGLMVGLPGQTLKDLANDLVFFKNVDADMIGMGPYI-----PEDDTWVAEDFNRVNPGIDKKAHLESMVQLTTRMNALARITLGNVNIAATTSLQAINPLGRELALSRGANVVMPILTPTEQRAQYQLYPGKPCVSHGADGCSSCLKMRIASVGKELLTDGSWSDPP 483          
BLAST of NO24G01500 vs. NCBI_GenBank
Match: XP_002671091.1 ([Fe] hydrogenase maturation protein [Naegleria gruberi] >EFC38347.1 [Fe] hydrogenase maturation protein [Naegleria gruberi])

HSP 1 Score: 354.0 bits (907), Expect = 7.200e-94
Identity = 196/434 (45.16%), Postives = 271/434 (62.44%), Query Frame = 0
Query:   34 ASSSPSPPTVTFHRTRPPAATAQCQHDAQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTTQDGALVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHRYTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRTVEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYKAFYEAGASRYLLRIESSNPVLYHKLHP--PSHSFESRRQCLNELKRIGFQVGTGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAERQH-HSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGRELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQLAGKELLLDGRWHDP 465
            ASS+ S P     + +        Q   +     L  + GV K E G+ ++L+KEQ++ +L  +D    +AL+  A + T + +GSKVY RGI+EFSNVC KDC YCGIRKHM+V RYTM K+EI+  A +AY    G++MLQSGEL T  RI+ ++DV+R ++ R                       T         +GL +AL +GEL  E+Y+  Y+AGA RYLLRIE+SNP LY KLHP   +H +E R++CL  L  IG+Q GTGVM+ +P Q V+D+A DLLFF++   DMIG+GPYIVQ  TP+G++++ +  H + AE+ E  R+ L     +M ALAR+++   NI+ATTALQA++P GRE+AL  GAN+VMPIITP + R  YQ+Y+ KP ID    E   CL  RV+ + K+L+LD  W DP
Sbjct:  102 ASSANSDPKAAERKMKRARTVNYLQKPLEQRILVLEKYFGV-KPELGKPVELTKEQIVNVLNIEDHEEQRALFDYANSITESIYGSKVYFRGIIEFSNVCQKDCNYCGIRKHMQVPRYTMPKEEIIEQAIWAYENHFGSIMLQSGELNTEGRISMLVDVIREIKKR-----------------------TGGGGPGEWNKGLGIALGVGELSRESYQRLYDAGAHRYLLRIETSNPELYSKLHPNDENHVWEERKKCLETLMDIGYQTGTGVMIMIPNQTVQDLADDLLFFRKIGADMIGMGPYIVQEGTPIGKIWMEQYGHMNEAEKKEYNRV-LFRLALKMTALARILIPEANISATTALQAINPAGREIALSSGANMVMPIITPTKYRVNYQLYQGKPCIDDTKEECKRCLTDRVKWSNKQLILD-EWGDP 509          
The following BLAST results are available for this feature:
BLAST of NO24G01500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24357.19.200e-16670.19radical sam domain protein [Nannochloropsis gadita... [more]
EWM24358.19.300e-15076.35radical sam domain protein [Nannochloropsis gadita... [more]
XP_004344718.12.700e-10952.61radical SAM domain containing protein [Acanthamoeb... [more]
AGA37362.21.000e-10049.51mitochondrial hydrogenase maturation protein, part... [more]
PRW59379.11.100e-9950.12iron hydrogenase assembly [Chlorella sorokiniana][more]
XP_005849486.11.100e-9749.17hypothetical protein CHLNCDRAFT_142788 [Chlorella ... [more]
PSC71854.13.100e-9747.53iron hydrogenase assembly [Micractinium conductrix... [more]
AHH85810.15.000e-9548.19FeFe-hydrogenase assembly protein [Tetraselmis sp.... [more]
AHH85811.13.200e-9447.95FeFe-hydrogenase assembly protein [Tetraselmis sp.... [more]
XP_002671091.17.200e-9445.16[Fe] hydrogenase maturation protein [Naegleria gru... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002842NSK002842Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01500.3NO24G01500.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G01500.2NO24G01500.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G01500.1NO24G01500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632220gene_7373Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100163g5gene6120Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01500.3NO24G01500.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G01500.2NO24G01500.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G01500.1NO24G01500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01500 ID=NO24G01500|Name=NO24G01500|organism=Nannochloropsis oceanica|type=gene|length=2385bp
CCACAGACACCGATGCTGCTTCTTAAAAAAAATGTGGCTGTCACTGGTTC
GACGGTTGCTGCTTTTTTTCGCAAACGTCCACGTCTCCCGGTCGCCCCTC
TCGAACGTCTTGCCTCCTCATCTCCCTCTCCCCCTACTGTAACATTCCAC
CGCACTCGCCCGCCAGCCGCTACGGCACAATGCCAGCACGATGCTCAAGC
TTCGTTTGCTCCCTTAGCGCACTTTCTAGGGGTGGAGAAACTCGAGCCAG
GGCGCATCATAGACCTCTCCAAGGAGCAGCTGATGGAACTATTGACGACG
CAAGACGGTGCCTTGGTACAGGCCTTGTATTCCCTCGCGGAGGCCGCAAC
GAgtaagtgcatgcagaattggattatagagttgcccaagtagtaatggt
tgacataagagaaatagcctttcgaactcacattcgtccctcccttcttt
cctttctttttcctttctgtgcccaacagCGGCATACTTTGGGTCCAAGG
TATATGCAAGGGGCATCGTCGAGTTTAGCAATGTCTGTACCAAGGATTGT
CTCTACTGCGGCATCCGCAAGCACATGgtgaggaggaggcggaggagggc
gaagagtagaaggagtagagactgtggccctgttcactgcattccgtgtg
tgtatctccctctcatcgtcccatttccaccccctttttatctcattcca
aatatgcagAAAGTGCACCGGTACACCATGACAAAACAAGAAATTGTGAC
TTGCGCGGAATTTGCCTACACCCAAGGGATGGGCACGCTTATGCTCCAAT
CGGGGGAACTGCCAACTCCTGAGCGGATCAAgtaagtggagataggaggg
aaatgagatacaaaagtgaaagtactcatcacaatggcacaattccggac
ctgattttcaaacaagtcattcttcttcctctatccctacttattatctc
cttttctcatagTTTCATGCTCGACGTCGTCCGCGCCGTCCGTCTTCGCA
CAGTCGAAATGGACCTCGAAGTTCATCCCTCCTGTTCCTCGTCCTTACCT
TCTGCTTCTCTCTCAGTGACGCCCAATAACCTCGCAGCTTCCTCTCAGCG
CGGCCTCGCCGTGGCTCTGTCCCTGGGGGAACTACCTTCAGAAACTTACA
AAGCGTTCTACGAGGCAGGCGCCTCTCGCTATCTTCTGAGGATCGAATCA
AGCAACCCCGTTCTCTATCACAAACTACATCCACCCTCTCACTCCTTTGA
ATCACGCCGGCAGTGCTTGAATGAATTGAAAAGGATTGGGTTCCAGGTTG
GGACGGGAGTGATGGTCGGCGTGCCCTATCAAGATGTGGAGGACATGGCG
GGCGATCTGCTGTTTTTCAAGgtaattactctcttcatcatatgaatagc
agggaatactctgtcatcgaatcgttctattgaatttgaattctgtctag
acttagctaggacaagtctggtgcgctcagcatcacacctcggtgatgag
aggagcgctgaagggaagctcacgcgggtctgacagcgctttgagtcacc
ctttcgcactcgttcccttttttctctctcctttctttcagGAATTTGAC
CCCGACATGATTGGCCTGGGTCCATACATCGTCCAAGCCAAAACTCCGCT
CGGACAAGTCTACCTCGCTGAGCGCCAACACCACTCAGCAGAAGAACTTG
AAAAGGAAAGGATAGATCTCTTGGAGCGAACGACACGGATGTATGCGCTC
GCAAGACTGATACTAGGAAATGTGAATATCGCGGCGACGACCGCATTGCA
GGCCCTCGATCCACAGGGGAGAGAGCTAGCGTTGCGGCGGGGGGCGAATG
TAGTGATGCCCATTATTACCCCTCAAAGGTTGAGAGgtaggtgagtacgg
cgggacggaagaaacgtatacaccctttgaatctctttgaaggttgcttt
ggtacctttttatattttatatccgtcaatagcaagagacttctcctttc
cttatggcgggtgaaccacgaattaactcaatgctttcttctcctctcac
ttttttgcgccctcagAGGAATACCAGATTTACGAGAACAAGCCTGGCAT
TGATCAAGATGCTTTGGAAAGCACCGCCTGTCTTGATCTTCGCGTGCAGC
TAGCGGGGAAAGAGTTGCTGCTGGACGGGAGATGGCACGACCCCCCCATT
ATTTGACGCGGAAGGTGAGATAATAAGAAAGAGAGAGACAAGTATTGCTG
GTAAATGAGCATTTTGACATGTTCGACGGCAAAATAAAGATGTATGGTGA
CAGACAGATAGATGTTTGAGGACCTGCTGAATGAAGAATCAAAGGAAAAA
TGGAAAGAAGATTTCCCAAAAAGGCACGAGAAGAC
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protein sequence of NO24G01500.3

>NO24G01500.3-protein ID=NO24G01500.3-protein|Name=NO24G01500.3|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MLLLKKNVAVTGSTVAAFFRKRPRLPVAPLERLASSSPSPPTVTFHRTRP
PAATAQCQHDAQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTTQDGA
LVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHR
YTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRT
VEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYK
AFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVG
TGVMVGVPYQDVEDMAGDLLFFKVITLFII*
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protein sequence of NO24G01500.2

>NO24G01500.2-protein ID=NO24G01500.2-protein|Name=NO24G01500.2|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp
MLLLKKNVAVTGSTVAAFFRKRPRLPVAPLERLASSSPSPPTVTFHRTRP
PAATAQCQHDAQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTTQDGA
LVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHR
YTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRT
VEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYK
AFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVG
TGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAE
RQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGR
ELALRRGANVVMPIITPQRLRGR*
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protein sequence of NO24G01500.1

>NO24G01500.1-protein ID=NO24G01500.1-protein|Name=NO24G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MLLLKKNVAVTGSTVAAFFRKRPRLPVAPLERLASSSPSPPTVTFHRTRP
PAATAQCQHDAQASFAPLAHFLGVEKLEPGRIIDLSKEQLMELLTTQDGA
LVQALYSLAEAATTAYFGSKVYARGIVEFSNVCTKDCLYCGIRKHMKVHR
YTMTKQEIVTCAEFAYTQGMGTLMLQSGELPTPERINFMLDVVRAVRLRT
VEMDLEVHPSCSSSLPSASLSVTPNNLAASSQRGLAVALSLGELPSETYK
AFYEAGASRYLLRIESSNPVLYHKLHPPSHSFESRRQCLNELKRIGFQVG
TGVMVGVPYQDVEDMAGDLLFFKEFDPDMIGLGPYIVQAKTPLGQVYLAE
RQHHSAEELEKERIDLLERTTRMYALARLILGNVNIAATTALQALDPQGR
ELALRRGANVVMPIITPQRLREEYQIYENKPGIDQDALESTACLDLRVQL
AGKELLLDGRWHDPPII*
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Synonyms
Publications