Naga_100163g5, gene6120 (gene) Nannochloropsis gaditana

Overview
NameNaga_100163g5
Unique Namegene6120
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:275865..278633 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100163g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:275865..278633 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01500NO24G01500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6332rna6332-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6333rna6333-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6332rna6332Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6333rna6333Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6332

>rna6332-protein ID=rna6332-protein|Name=rna6332|organism=Nannochloropsis gaditana|type=polypeptide|length=376bp
MGMNQIVVNPSLSHLSSPLLSCLFAAAYFGTKVYARGIVEFSNVCTKDCF
YCGIRKHTKVHRYTMTKEEILACAEFAYSQGMGTLMLQSGELPSPERINF
MLDVVRAIRRRTMDLACESPPFPSAGPNQRDFPSQRGLAVALSLGELPSS
VYQAFLEAGASRYLLRIETSNPTLYTRLHPASHSFQARRKCLEELQRIGF
QVGTGVMVGVPFQTVEDQANDLLFFKELDPDMIGLGPYIVQSQTPLGKLW
LEEHGEESAAKQEANRVALLERTTRMYALARIMLGNVNIAATTALEALDP
EGRELALRRGANVVMPIITPQRLRGQYEIYENKPGIDQDALDSTACLERR
VRMAGKDLLLDGGWHDPPHFVRPSVE
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protein sequence of rna6333

>rna6333-protein ID=rna6333-protein|Name=rna6333|organism=Nannochloropsis gaditana|type=polypeptide|length=482bp
MQQSLTPGNGMLLPRTLHYFPANVAVLSVCGSCLGFHTKQILRARHFWTC
SCPRALGRQRPLSVTIRYASDKGTARGGAEPLWSPLKDFLGLDRLDTGQK
LDISRRQLTELLTTNDRTLIKSMYAVAEAATTAYFGTKVYARGIVEFSNV
CTKDCFYCGIRKHTKVHRYTMTKEEILACAEFAYSQGMGTLMLQSGELPS
PERINFMLDVVRAIRRRTMDLACESPPFPSAGPNQRDFPSQRGLAVALSL
GELPSSVYQAFLEAGASRYLLRIETSNPTLYTRLHPASHSFQARRKCLEE
LQRIGFQVGTGVMVGVPFQTVEDQANDLLFFKELDPDMIGLGPYIVQSQT
PLGKLWLEEHGEESAAKQEANRVALLERTTRMYALARIMLGNVNIAATTA
LEALDPEGRELALRRGANVVMPIITPQRLRGQYEIYENKPGIDQDALDST
ACLERRVRMAGKDLLLDGGWHDPPHFVRPSVE
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Synonyms
Publications