NO21G00680, NO21G00680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_005856043.1 (membrane protein, partial [Nannochloropsis gaditana CCMP526] >EKU20316.1 membrane protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 347.8 bits (891), Expect = 5.700e-92 Identity = 185/294 (62.93%), Postives = 215/294 (73.13%), Query Frame = 0 Query: 119 GFRPFKSLREVCGNVSLELDEDQRALIGPPTSQFFAGFRLRELDETNQSTFLKEAGRVQQ----------------GNGL----------------SAEDATYLTPLDVKDFPDLKIVHGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFILKTPSPPS-FPXXXXLSAPDDAAVEVVSDDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYLDPSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQ 380 GFRPFKSLRE G+V L++DE + LI P TSQFFAGF+LRELD++N +TFLK+ G++Q+ G G+ E ++LT LDVKD+PDLKI HGF+GSILGFSI FRTNAAYDRYYEGRKILS ILENSRSI+RDVYSF+LK P+ PS L PDDAAV V+S D+RRRLN+LFAF+RQSVRESL GFSP+SDM V F N+T+YLDPS P LLDLLSK+EA RYA LSPR+RPGAVSAEINIILQIL R+ Y DAFL K Q Sbjct: 1 GFRPFKSLREENGDVVLDVDEPHQPLIAPLTSQFFAGFQLRELDDSNMNTFLKDTGKIQKTLRTLLWFAYLLWPYIGFGIFSSILAQLLLATVSQEHVEQGSFLTMLDVKDYPDLKIGHGFIGSILGFSIAFRTNAAYDRYYEGRKILSIILENSRSILRDVYSFLLKAPAFPSPTSSCSSLPVPDDAAVLVISSDLRRRLNILFAFIRQSVRESLSGFSPNSDMGTVSFSNSTFYLDPSLPHLLDLLSKEEAERYAALSPRARPGAVSAEINIILQILSTRMLYADAFLCKAQ 294
BLAST of NO21G00680 vs. NCBI_GenBank
Match: EWM22571.1 (hypothetical protein Naga_100993g1 [Nannochloropsis gaditana]) HSP 1 Score: 164.5 bits (415), Expect = 8.900e-37 Identity = 86/161 (53.42%), Postives = 104/161 (64.60%), Query Frame = 0 Query: 104 SISSPTLPVGTWPPKGFRPFKSLREVCGNVSLELDEDQRALIGPPTSQFFAGFRLRELDETNQSTFLKEAGRVQQ----------------GNGL----------------SAEDATYLTPLDVKDFPDLKIVHGFVGSILGFSIGFRTNAAYDRYYEGRK 233 S+ S TLP G WPP GFRPFKSLRE G+V L++DE + LI P TSQFFAGF+LRELD++N +TFLK+ G++Q+ G G+ E ++LT LDVKD+PDLKI HGF+GSILGFSI FRTNAAYDRYYE K Sbjct: 94 SVISSTLPGGNWPPNGFRPFKSLREENGDVVLDVDEPHQPLIAPLTSQFFAGFQLRELDDSNMNTFLKDTGKIQKTLRTLLWFAYLLWPYIGFGIFSSILAQLLLATVSQEHVEQGSFLTMLDVKDYPDLKIGHGFIGSILGFSIAFRTNAAYDRYYEVAK 254
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_009033392.1 (hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens] >EGB12347.1 hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens]) HSP 1 Score: 119.4 bits (298), Expect = 3.300e-23 Identity = 89/312 (28.53%), Postives = 139/312 (44.55%), Query Frame = 0 Query: 190 LTPLDVKDFP--DLKIVHGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFI---------LKTPSPPSFPXXXXLSAPDDAAVEVVSDDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYLDPSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPY-----------LLILNVATFIFVYSTPFLYNTGIEGRYLGVQLLVIAYYGILSIGQSIENPYAWDTFDIDFEDFAIQLSRDLSATA 480 L L VK P I G VG++L + FRTN+AY+RYYEG+K + R II + ++F+ L P+ A + V + + +RR+ NVL +RQ +RE GF P+ + VP+ T+ LDPS P+L+D+L+ E Y +S +R S + LQ L + AF ++ + +A + RI DTP+P+ Y + + L+ + G L + YYG++ I IENP+ + D D + FA +L + A A Sbjct: 44 LDHLGVKSMPSSQFDITQGLVGAVLSLLLVFRTNSAYERYYEGKKAYGVVTNQVRQIIMNAHAFLAFHEDASGHLNARYQPAAELRE--RAHEAEVVHELRERVRRQANVLLGVLRQDLREKRCGFVPECALHEVPYNKRTWILDPSRPRLVDMLTPREVATYGTVSSGARVMLASHSLMDALQRLAPSLAQDRAFTECSTRNIQELLDAFKSCQRIVDTPLPFTYTXXXXXXXXXXXXXXXXXVAYWARTEKRLHWYSMSG-ILPSIVTAFFYYGVMQIAIEIENPFNFADVDHDLDGFADKLHSETLAIA 352
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_003058502.1 (membrane protein [Micromonas pusilla CCMP1545] >EEH56957.1 membrane protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 105.5 bits (262), Expect = 4.900e-19 Identity = 74/256 (28.91%), Postives = 127/256 (49.61%), Query Frame = 0 Query: 205 HGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFILKTPSPPSFPXXXXLSAPDDAAVEVVSDDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYLDPSF--PQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEG-RYLGVQLLVIAYYGILSIGQSIENPYAW 458 H G I+GF + FRT+ +Y R+YEG+K L + ++ R+ +F+ + + A ++ ++RR +VL+AF+RQ+VRE G+ D+AA + + D F P L LL+ E + L +R V ++ I++ D + L EA+ M RI T +P+ YL ++N FIFV+S PF++ TG + + ++ I++YG+ + +SIE+PY+W Sbjct: 1088 HSVAGGIIGFMLVFRTSISYYRFYEGKKYLGNLYDSVRNANIGFNAFMRSSED-------EHVHAGFSHSLNRDRVELRRLSSVLYAFIRQAVREHRHGYPTRCDVAAT---DASLVDDDLFGRPSLGVLLTDAERAEFKALDFNNRANMVVWKMQSIVEHHRRLGHVSDRGAFDIYHDLEGCLEAYKHMERIVSTKMPFQYLHMVNFLLFIFVFSAPFVFTTGFKWLSPIPSCIVAISFYGVAEVARSIEDPYSW 1333
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_002501798.1 (membrane protein [Micromonas commoda] >ACO63056.1 membrane protein [Micromonas commoda]) HSP 1 Score: 104.0 bits (258), Expect = 1.400e-18 Identity = 74/256 (28.91%), Postives = 121/256 (47.27%), Query Frame = 0 Query: 205 HGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFILKTPSPPSFPXXXXLSAPDDAAVEVVSDDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYLDPSF--PQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEG-RYLGVQLLVIAYYGILSIGQSIENPYAW 458 H G I+GF + FRT+ +Y R+YEG+K L + + R+ SF+ DA + ++RR NVL+AF+RQ+VRE G+ + P + D F P L LL+ +E + + P +R V + I++ + + L EA M RI T +P+ YL ++N FIFV+S PF++ TG + + ++ I++YG+ + +SIE+PY+W Sbjct: 1106 HSVAGGIIGFMLVFRTSISYYRFYEGKKYLGHLYDCIRNANIAFNSFLRVGNDEQG----------HDAKINADKVELRRLSNVLYAFIRQAVREHRHGY---PEGCPAPSDDAGLVRDDVFGRPGLGVLLTDEEKEEFLAIDPNNRANMVVWRMQSIVEHHRRLGHVCERGAFDIYHDLEGCLEAFKHMERIVSTKMPFQYLHMVNFLLFIFVFSAPFVFTTGFKWLSPIPSCIVAISFYGVAEVARSIEDPYSW 1348
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_007511540.1 (membrane protein [Bathycoccus prasinos] >CCO17661.1 membrane protein [Bathycoccus prasinos]) HSP 1 Score: 103.6 bits (257), Expect = 1.900e-18 Identity = 72/266 (27.07%), Postives = 120/266 (45.11%), Query Frame = 0 Query: 205 HGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFILKTPSPPSFPXXXXLSAPDDAAVEVVS--DDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAA--VPFINTTYYLDPSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEG-RYLGVQLLVIAYYGILSIGQSIENPYAWDTFDIDFE 466 H G ++GF++ FR + +Y RYYE +K + + E +R+ +F L+ P A + V D++RR N +F F+R RE+ G ++ + + F P L +L++ E P SRP V A+ +++ R + + L A + + RI +T +P+ YL +LN A F FVYS PF++ G L+ IA+YG + +++ENP+ +DT D E Sbjct: 1043 HSVCGGVIGFTLCFRASISYYRYYEAKKFMGALCEGARNFACGSLAF-LRPDLPGELQYDGDAYKASTAFISSVELRDELRRLSNCMFGFIRHIARETRCGVRKVGEVQSTNIDFSQLIREDPRGNPSLAVILTESEKDFMCGKLPSSRPALVVAKCQKLVEEARKRNDISERGAFDLYDDLNDCLVACNNLERISETKMPWIYLHLLNFALFAFVYSAPFIFTAGFGWLSPAPAMLIAIAFYGTAEVARNMENPFDYDTDGHDIE 1307
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_003080714.2 (Bestrophin/UPF0187 [Ostreococcus tauri] >CEG01422.1 Bestrophin/UPF0187 [Ostreococcus tauri]) HSP 1 Score: 99.8 bits (247), Expect = 2.700e-17 Identity = 71/258 (27.52%), Postives = 125/258 (48.45%), Query Frame = 0 Query: 205 HGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFILKTPSPPSFPXXXXLSAPDDAAVEVVSD--DIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYLD--PSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEG-RYLGVQLLVIAYYGILSIGQSIENPYAW 458 H G+I+GF++ FR +Y RYY+G+ L ++ + R + V + + + ++A + EV D +IRR NVL F+RQ++RE G P S P T Y++ +P L LLS E YA+ R+R G +++I I+ D ++ GH+ A +T R+ + +P+ +L ++N F+FV + PF++ T + L L+ + +GI +G +++P+ W Sbjct: 797 HVMSGAIIGFTLIFRLALSYTRYYDGKGALGLMVNSIRCLNVGVSTMLRSS----------RINATPNVLKEVDEDAAEIRRLSNVLMGFMRQAIRERRHGVDPSSLTKKAP--TTDEYIEDMSGWPSLSLLLSDKEKDVYAKADYRARIGICASKIISIIDERRRLKHISDRSAYEMLGHVENCISACATAERLLASSMPFAFLHLMNFVLFVFVMTAPFVFVTSYKWLAPLPSMLVAASLFGIAEVGSLLDDPFGW 1042
BLAST of NO21G00680 vs. NCBI_GenBank
Match: OUS46902.1 (Bestrophin, RFP-TM, chloride channel-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 99.0 bits (245), Expect = 4.600e-17 Identity = 74/256 (28.91%), Postives = 126/256 (49.22%), Query Frame = 0 Query: 205 HGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSIIRDVYSFILKTPSPPSFPXXXXLSAPDDAAVEVVSDDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYLD--PSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEG-RYLGVQLLVIAYYGILSIGQSIENPYAW 458 H G+I+GF++ FR +Y RYY+G+ L ++ + R + V S +L++ + P L D+ A E IRR NVL F+RQ++RE G P S P T Y++ +P L LLS E YA+ R+R G +++I I+ D ++ GH+ A +T R+ + +P+ +L ++N F+FV + PF++ T + L L+ + +GI +G +++P+ W Sbjct: 850 HVMSGAIIGFTLIFRLALSYTRYYDGKGALGLMVNSIRCLNVGV-STMLRSSRINATP--SVLKEVDEDAAE-----IRRLSNVLMGFMRQAIRERRHGVDPSSLTKKAP--TTDEYIEDMSGWPSLSLLLSDKEKDVYAKADYRARIGICASKIISIIDERRRLKHISDRSAYEMLGHVENCISACATAERLLASSMPFAFLHLMNFVLFVFVMTAPFVFVTSYKWLAPLPSMLVAASLFGIAEVGSLLDDPFGW 1095
BLAST of NO21G00680 vs. NCBI_GenBank
Match: EWM20641.1 (Bestrophin/UPF0187 [Nannochloropsis gaditana]) HSP 1 Score: 90.5 bits (223), Expect = 1.600e-14 Identity = 49/167 (29.34%), Postives = 90/167 (53.89%), Query Frame = 0 Query: 315 FINTTYYLDPSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINII-LQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEG------RYLGVQLLVIAYYGILSIGQSIENPYAWDTFDIDFEDFAIQLSRD 475 F T+ LDP+ P+L+DLL+++E ++ R+ SRP + E+N++ +ILG + + + + + MLR+ + +P+PY ++N+ TFIFV+ PF+Y + + LL +A+YG+ + + ++P WD D D E F ++L+ D Sbjct: 7 FNKDTFVLDPTRPRLVDLLTEEEVQQFRRMPVNSRPVYLITEMNLLAYRILG--LSKETSIRINIDNKFQEVLAGWNGMLRVENLRIPFPYTHVVNLLTFIFVFGAPFIYTSRTQNWAENDVLLFASLLLGVAFYGLEDMARKCQHPLGWDLEDHDLEIFGVRLNLD 171
BLAST of NO21G00680 vs. NCBI_GenBank
Match: XP_001419322.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97615.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 86.3 bits (212), Expect = 3.100e-13 Identity = 66/262 (25.19%), Postives = 119/262 (45.42%), Query Frame = 0 Query: 205 HGFVGSILGFSIGFRTNAAYDRYYEGRKILSTILENSRSI--IRDVYSFILKTPSPPSFPXXXXLSAPD---DAAVEVVSDDIRRRLNVLFAFVRQSVRESLIGFSPDSDMAAVPFINTTYYL---DPSFPQLLDLLSKDEAIRYARLSPRSRPGAVSAEINIILQILGARIQYVDAFLGKVQGHLGRITEAHSTMLRIRDTPVPYPYLLILNVATFIFVYSTPFLYNTGIEGRY-LGVQLLVIAYYGILSIGQSIENPYAW 458 H V ++L F + FR A+ R+ +G+ + + + R++ + DV + P S S+ D +E + +IRR N+ FAF+RQ++RES G ++T L D P + +L +DE YA+L+ +RP AV + ++ + + + R +A+ + I +TP P Y + V F F++S PF ++ ++ R L L +YG+ I ++E+P+ W Sbjct: 48 HYAVSAVLSFLLVFRAVQAFRRFEDGKFAMIDVKDALRNLASVTDV-----EAREPASGSIASMFSSKDHHTPTTIEELQSEIRRLCNLTFAFMRQALRESRFGVVDAGVRGGKRDVSTESLLHRDDDGTPNVSNLTKRDERTEYAKLAVENRPDAVMIDALTRIETMHRAGVLSERAAMEAFRESQRALDAYRQAMLIIETPTPKQYSHTVTVLLFAFIFSAPFALSSLMDWRTPLVSATLAWLFYGVNEIASTLEDPFKW 304 The following BLAST results are available for this feature:
BLAST of NO21G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00680 ID=NO21G00680|Name=NO21G00680|organism=Nannochloropsis oceanica|type=gene|length=3059bpback to top protein sequence of NO21G00680.3 >NO21G00680.3-protein ID=NO21G00680.3-protein|Name=NO21G00680.3|organism=Nannochloropsis oceanica|type=polypeptide|length=517bpback to top protein sequence of NO21G00680.2 >NO21G00680.2-protein ID=NO21G00680.2-protein|Name=NO21G00680.2|organism=Nannochloropsis oceanica|type=polypeptide|length=537bpback to top protein sequence of NO21G00680.1 >NO21G00680.1-protein ID=NO21G00680.1-protein|Name=NO21G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=549bpback to top Synonyms
Publications
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