NO19G02020, NO19G02020 (gene) Nannochloropsis oceanica

Overview
NameNO19G02020
Unique NameNO19G02020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2854
Alignment locationchr19:590541..593394 +

Link to JBrowse

Properties
Property NameValue
DescriptiontRNA (guanine(37)-N1)-methyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:590541..593394 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR030382MeTrfase_TRM5/TYW2
Homology
BLAST of NO19G02020 vs. NCBI_GenBank
Match: EWM23671.1 (trna (guanine-n -)-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 602.4 bits (1552), Expect = 1.300e-168
Identity = 304/472 (64.41%), Postives = 362/472 (76.69%), Query Frame = 0
Query:   69 EEFTLDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDGNDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSS-PSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLEERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLPRYSELRRGGGGGKRGTKRTLDEEGKGDSKAVVQSNAK 540
            EE +LD +AF RT RV ALRLP K CN+AVKQLQ H+LRLRHVK I+K +DG D  R++LLATEV E      + L DLP  VK FV A   ++   P   +  P S +SLT HQV +DY  F+ EEVL+Q FAPL++EAPTSFET+DHVAH+NLRDA+LPYKRLIAQVILDKN+PRIRTVVNK G+I+T++RTFPLEVLAGE++L VSVRE+GATF FN+AEVYWNSRLSTEH RL++++   F A  PR PLA+CVVWDVFAGVGPFA+PLG++GCVVHANDLNPRSHHYL+ NI +NKV  +VTPYN DGR FLRERAR+  PV H+IMNLPA+ALEFLD F+A+RE                 GLFDYLE RP VH +CFSKA+DPT EALA AS  LGC L+NGKNGVSVHRVRDVAPKKEMLC+SFPLPR+ E        KR  +   ++EG+ D+  +VQ  +K
Sbjct:   24 EEVSLDPSAFRRTFRVAALRLPAKYCNSAVKQLQPHLLRLRHVKGIVKPEDGGDTHRLLLLATEVNEQHEDTAVELTDLPDDVKTFVHATNAQEDPTPAAEAEPPCSRVSLTTHQVHLDYASFSAEEVLRQVFAPLRLEAPTSFETVDHVAHLNLRDAHLPYKRLIAQVILDKNAPRIRTVVNKLGSIQTQYRTFPLEVLAGESDLNVSVREAGATFRFNFAEVYWNSRLSTEHARLVNAVVAHFHASRPRVPLASCVVWDVFAGVGPFAIPLGLRGCVVHANDLNPRSHHYLVDNIARNKVGAYVTPYNRDGRDFLRERARQHQPVDHIIMNLPATALEFLDTFAAERE------ETAGEEEGRSRGLFDYLEARPIVHAYCFSKAEDPTAEALARASAILGCVLVNGKNGVSVHRVRDVAPKKEMLCLSFPLPRHCEF---NFSRKRAMESEREKEGREDTVDMVQKRSK 486          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: XP_005853561.1 (trna (guanine-n -)-methyltransferase-like protein [Nannochloropsis gaditana CCMP526] >EKU22797.1 trna (guanine-n -)-methyltransferase-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 492.3 bits (1266), Expect = 2.000e-135
Identity = 243/383 (63.45%), Postives = 293/383 (76.50%), Query Frame = 0
Query:  112 KAILKSDDGNDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSS-PSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLEERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKE 494
            + I+K +DG D  R++LLATEV E      + L DLP  VK FV A   ++   P   +  P S +SLT HQV +DY  F+ EEVL+Q FAPL++EAPTSFET+DHVAH+NLRDA+LPYKRLIAQVILDKN+PRIRTVVNK G+I+T++RTFPLEVLAGE++L VSVRE+GATF FN+AEVYWNSRLSTEH RL++++   F A  PR PLA+CVVWDVFAGVGPFA+PLG++GCVVHANDLNPRSHHYL+ NI +NKV  +VTPYN DGR FLRERAR+  PV H+IMNLPA+ALEFLD F+A+RE                 GLFDYLE RP VH +CFSKA+DPT EALA AS  LGC L+NGKNG +  R R +  ++E
Sbjct:   13 RGIVKPEDGGDTHRLLLLATEVNEQHEDTAVELTDLPDDVKTFVHATNAQEDPTPAAEAEPPCSRVSLTTHQVHLDYASFSAEEVLRQVFAPLRLEAPTSFETVDHVAHLNLRDAHLPYKRLIAQVILDKNAPRIRTVVNKLGSIQTQYRTFPLEVLAGESDLNVSVREAGATFRFNFAEVYWNSRLSTEHARLVNAVVAHFHASRPRVPLASCVVWDVFAGVGPFAIPLGLRGCVVHANDLNPRSHHYLVDNIARNKVGAYVTPYNRDGRDFLRERARQHQPVDHIIMNLPATALEFLDTFAAERE------ETAGEEEGRSRGLFDYLEARPIVHAYCFSKAEDPTAEALARASAILGCALVNGKNGFNFSRKRAMESERE 389          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: ETL48102.1 (hypothetical protein L916_02245 [Phytophthora parasitica])

HSP 1 Score: 318.5 bits (815), Expect = 3.900e-83
Identity = 192/436 (44.04%), Postives = 251/436 (57.57%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G EL       S H VRDVAPKK M+CISF LP
Sbjct:   35 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKKDVKERAQKIMGGEL--DPERTSFHLVRDVAPKKVMVCISFQLP 412          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: XP_009530418.1 (hypothetical protein PHYSODRAFT_561839 [Phytophthora sojae] >EGZ12989.1 hypothetical protein PHYSODRAFT_561839 [Phytophthora sojae])

HSP 1 Score: 316.2 bits (809), Expect = 1.900e-82
Identity = 185/436 (42.43%), Postives = 249/436 (57.11%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+A F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL  +V++ +T                      +  ++ ++S      ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES A F FNYAEVYWNSRL  EH R+I +I  Q             VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G  L       S H VRDVAPKK M+CISF LP
Sbjct:    3 LDKALFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNAKVKDAET---------------------LQPLNEDLVSFLKEESLAFVSHAIELDYDYFAVDQVLSEIL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNIIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKAKFKFNYAEVYWNSRLQQEHLRIIRTIKPQ------------DVVCDMMCGIGPFAIPVALNGTKVYANDLNPRSYHYLKENIAINKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKQDVKERAEKIMGGAL--DPERTSFHLVRDVAPKKVMVCISFQLP 380          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: ETM01197.1 (hypothetical protein L917_02181 [Phytophthora parasitica] >KUF85708.1 tRNA (guanine(37)-N1)-methyltransferase [Phytophthora nicotianae])

HSP 1 Score: 316.2 bits (809), Expect = 1.900e-82
Identity = 191/436 (43.81%), Postives = 250/436 (57.34%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G EL         H VRDVAPKK M+CISF LP
Sbjct:    6 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKKDVKERAEKIMGGEL--DPERTLFHLVRDVAPKKVMVCISFQLP 383          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: XP_008899634.1 (hypothetical protein PPTG_07223 [Phytophthora parasitica INRA-310] >ETN14997.1 hypothetical protein PPTG_07223 [Phytophthora parasitica INRA-310] >ETP52646.1 hypothetical protein F442_02368 [Phytophthora parasitica P10297])

HSP 1 Score: 316.2 bits (809), Expect = 1.900e-82
Identity = 191/436 (43.81%), Postives = 250/436 (57.34%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G EL         H VRDVAPKK M+CISF LP
Sbjct:   35 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKKDVKERAEKIMGGEL--DPERTLFHLVRDVAPKKVMVCISFQLP 412          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: ETO83668.1 (hypothetical protein F444_02375 [Phytophthora parasitica P1976])

HSP 1 Score: 316.2 bits (809), Expect = 1.900e-82
Identity = 191/436 (43.81%), Postives = 250/436 (57.34%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G EL         H VRDVAPKK M+CISF LP
Sbjct:   45 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKKDVKERAEKIMGGEL--DPERTLFHLVRDVAPKKVMVCISFQLP 422          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: ETP24688.1 (hypothetical protein F441_02354 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 316.2 bits (809), Expect = 1.900e-82
Identity = 191/436 (43.81%), Postives = 250/436 (57.34%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G EL         H VRDVAPKK M+CISF LP
Sbjct:   35 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKKDVKERAQKIMGGEL--DPERTLFHLVRDVAPKKVMVCISFQLP 412          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: ETK94704.1 (hypothetical protein L915_02287 [Phytophthora parasitica])

HSP 1 Score: 315.1 bits (806), Expect = 4.300e-82
Identity = 191/436 (43.81%), Postives = 250/436 (57.34%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +IRTVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F                      G FD+ E E PY+H +CFS A+D   +    A   +G EL         H VRDVAPKK M+CISF LP
Sbjct:   35 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIRTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAF---------------------PGHFDHWEGELPYIHCYCFSNAEDVKKDVKERAEKIMGGEL--DPERTLFHLVRDVAPKKVMVCISFQLP 412          
BLAST of NO19G02020 vs. NCBI_GenBank
Match: ETI54848.1 (hypothetical protein F443_02403 [Phytophthora parasitica P1569] >ETM54377.1 hypothetical protein L914_02276 [Phytophthora parasitica])

HSP 1 Score: 314.3 bits (804), Expect = 7.300e-82
Identity = 190/436 (43.58%), Postives = 249/436 (57.11%), Query Frame = 0
Query:   73 LDRAAFTRTLRVVALRLPTKLCNAAVKQLQNHVLRLRHVKAILKSDDG-----NDERRVVLLATEVEEGKTGDDITLADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMNLPASALEFLDEFSAQREXXXXXXXXXXXXXXXXXGLFDYLE-ERPYVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFPLP 503
            LD+  F +TL VV +R+  K     VK+L  H+L L  ++ ++          N   +++LL ++V+     D  TL  L   + AF+   KEE              ++   H + +DY+ F V++VL +   P  M+ P+SFET+ H+AH+NLRD  LPYK +I QVILDKN+ +I TVVNKT NIET+FRTFP+EVLAG++++EV V ES ATF FNYAEVYWNSRL  EH R+I  I                VV D+  G+GPFA+P+ + G  V+ANDLNPRS+HYL  NI  NKV+  VTPYN DGR FL +    +     V+MNLPA ALEFLD F  Q                     FD+ E E PY+H +CFS A+D   +    A   +G EL         H VRDVAPKK M+CISF LP
Sbjct:   35 LDKTLFKKTLEVVGVRVEAKKIGRVVKKLHGHLLNLPRLRNVVPDPTNPDPYKNSSSKLILLNSKVK-----DMETLQPLNEDLVAFL---KEES-------------LAFVSHAIELDYSYFAVDQVLSEVL-PKGMDIPSSFETVGHIAHLNLRDNQLPYKNVIGQVILDKNA-QIHTVVNKTDNIETKFRTFPMEVLAGDDDMEVEVHESKATFQFNYAEVYWNSRLQQEHLRIIRQIKPH------------DVVCDMMCGIGPFAIPVALNGSKVYANDLNPRSYHYLKQNIALNKVEKLVTPYNLDGREFLAKLLSEKKQFTQVLMNLPAIALEFLDAFPGQ---------------------FDHWEGELPYIHCYCFSNAEDVKKDVKERAEKIMGGEL--DPERTLFHLVRDVAPKKVMVCISFQLP 412          
The following BLAST results are available for this feature:
BLAST of NO19G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23671.11.300e-16864.41trna (guanine-n -)-methyltransferase [Nannochlorop... [more]
XP_005853561.12.000e-13563.45trna (guanine-n -)-methyltransferase-like protein ... [more]
ETL48102.13.900e-8344.04hypothetical protein L916_02245 [Phytophthora para... [more]
XP_009530418.11.900e-8242.43hypothetical protein PHYSODRAFT_561839 [Phytophtho... [more]
ETM01197.11.900e-8243.81hypothetical protein L917_02181 [Phytophthora para... [more]
XP_008899634.11.900e-8243.81hypothetical protein PPTG_07223 [Phytophthora para... [more]
ETO83668.11.900e-8243.81hypothetical protein F444_02375 [Phytophthora para... [more]
ETP24688.11.900e-8243.81hypothetical protein F441_02354 [Phytophthora para... [more]
ETK94704.14.300e-8243.81hypothetical protein L915_02287 [Phytophthora para... [more]
ETI54848.17.300e-8243.58hypothetical protein F443_02403 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004543NSK004543Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02020.1NO19G02020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G02020.2NO19G02020.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545406gene_7603Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100030g10gene6754Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02020.1NO19G02020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G02020.2NO19G02020.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02020 ID=NO19G02020|Name=NO19G02020|organism=Nannochloropsis oceanica|type=gene|length=2854bp
GACTTTACTTGCGAAGTGCGCTGTGTTTCGTGTGGAAGAATGGACCGGGA
CATATCTGAGGATACATCAACAAGGAATATTGAGACCTGATGACAGGCTT
GTCCTAAAGGAGATAGCTGTTCAAGGACAGCGACAAAGACAGATGAGTAG
AAGGGGCAATCACATCGACCGGTAAGCAAACAAGAAAACCACGTGCAATA
GAGAACATCTGTGCGGCGAATGTGCTTATTGAGGTAACGTCAAGTTATGG
CGACATCCTCTTCGGACGCTGCTAATCCCACCACCCTGAGCACAGAAAAA
TAGCTGTTTAGATAAGATACCTTGCCCGAAAGACGGTCCTCATCTCAAGC
TATAACCTACTCGTTTATCGCTTTTGACTTTGACGAGGGCACAACGCACA
ACACAGAACAACCACAACCTCTCAGAATCTTGGAATTATGTGGACCCACA
TACACACCATCATTGTCGGGCGGGGAGATTGAGAAGTCCATCCAGTGATT
GATTGAGATAGGCCATGACAAGACATATTTAGGTGAATAGTACCCGCTAG
AAAGGTGTTAATGCCAGCATCGGTGAGATTACAGAGTGCCAGCATTTTGG
TTTTTGAGGTTCAACAAGTTGTTCGCGGGGGCTCCCCGAAATGGTCTTGT
GACTTTCAGTCGAATATCATGCTAAAGGTGAGGGTTTGTGGGGGGGCGGA
TCGTTGGAGGACGGATATTAAAATGATCTTAAAATGGTTACATTCAGGTA
CCTGCATATTCATTGGAAACAGAAGACCATAAAAGACGTTGGTCAAAGGC
CCGCGGCCTGCTCCTCTGTGTATTCTTCTGCCGAAGAACACCGCTCGGTG
GTCGTCAAAATGCCAAAGTGAACATGCACTCATATCACACCCATTTGCCC
TGTTTACCCCTTGGACAACCCCTTAAAAAGATCCTGTGGGGGAGCGACAT
TTGGCGGCCAAAAACAGTGCGTGGGGGTGACTGAGAACCACAGAATCAGT
TCAGGGATCCCCGAACAGGAGGTTAGGTTTGCCTTGCCCTTCATTCTTCA
CACTGTCATGTCCACTCTCCTTCGCACCCGCAGGTATCCAAACCCACCAT
GAGCACGGGCTGCGGCAGCACGGCCCCGCCTGCGCCGAGGGACGCGGGTG
CATCGTCTACCGTGCAGCAGGAAGAATTTACGCTTGATCGCGCTGCCTTT
ACTCGTACGCTGCGGGTGGTGGCCCTGCGCCTCCCAACCAAGCTCTGCAA
CGCCGCCGTGAAACAGCTGCAGAACCACGTGCTTCGCCTCCGACACGTGA
AAGCTATTCTCAAATCTGATGATGGGAACGACGAGCGCCGCGTGGTGCTC
CTCGCTACCGAGGTCGAGGAGGGCAAAACTGGCGATGACATCACGCTGGC
CGACCTACCAGCCCCTGTCAAAGCTTTTGTGGAGGCTGCAAAGgtaagaa
ctttcggtgtctacgtgattgtctgcaggcagatagtggtaccaaagtgg
gacctcctctttaattttttgaattatgcctccttcactgcgtagaccct
tgctccctccttcaatttaaccccaattcttccctttctcttcccacaat
cttagGAAGAGCAGGCATCTGACCCCATCATTTCGTCGTCCCCGTCCTCA
CCAATTTCTTTGACCATCCACCAAGTGATCATGGACTACAACTGCTTCAC
TGTGGAGGAAGTTCTCAAGCAATTCTTCGCTCCCCTGCAAATGGAAGCCC
CTACCTCCTTCGAAACCATCGACCATGTCGCGCATATCAACCTCCGCGAT
GCCTACCTTCCATACAAGCGTCTTATCGCCCAAGTCATCCTTGACAAGAA
CTCTCCCCGTATTCGTACCGTGGTAAATAAAACAGGCAACATCGAAACGC
GCTTCCGGACCTTCCCCCTCGAGGTCCTGGCTGGGGAGAACAACCTGGAG
GTGTCCGTCCGAGAGAGCGGGGCCACCTTCCACTTCAATTACGCCGAGGT
TTATTGGAATAGCCGCCTCTCCACAGAACACGGTCGTCTGATCCACTCCA
TCACCAAGCAGTTTCAAGCGAGGCACCCTCGAAGCCCACTGGCGGCGTGT
GTGGTCTGGGACGTGTTCGCGGGCGTCGGGCCATTCGCCGTCCCTCTCGG
TGTGAAAGGCTGCGTCGTCCATGCCAATGACCTGAACCCCCGCTCGCACC
ACTACCTTCTTGCCAACATCAACAAGAACAAGGTGGACTGCCATGTGACC
CCCTACAACGAGGACGGCCGGGTTTTCCTCCGGGAGCGGGCACGGCGCCG
TTTACCCGTGCATCACGTGATCATGAACCTCCCTGCGTCTGCCCTCGAGT
TCCTGGACGAATTTTCCGCTCAGAGGGAGCGAGAGGAGGAAGGAAAGGAA
GGACAAGAAGAAGAGGAAGAAGAAGCAGAAGGGCTGTTTGATTATTTGGA
GGAGCGGCCTTACGTACACGTGCATTGTTTTAGCAAGGCCGACGACCCGA
CAACGGAGGCTCTGGCTCACGCCTCCGATGCCCTGGGGTGTGAACTCTTG
AATGGCAAAAATGGGGTGAGTGTTCACCGAGTCAGAGACGTGGCGCCGAA
GAAGGAGATGTTGTGCATATCCTTTCCTTTGCCGCGGTACAGCGAGCTGA
GGAGAGGTGGTGGCGGTGGGAAGAGAGGAACTAAAAGGACGCTGGACGAG
GAGGGAAAAGGCGATTCTAAAGCTGTGGTCCAGAGCAATGCGAAGGAAGA
ATGAATCGCACATTTCTGATGGTGATAAAGTTTGGGGGAAGAGTGAAGCC
ACGATTAAAGTACACCACACCTGAGCAAATTTCAAGTAATTCTCGAAGAC
ACCT
back to top

protein sequence of NO19G02020.1

>NO19G02020.1-protein ID=NO19G02020.1-protein|Name=NO19G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bp
MPASVRLQSASILVFEVQQVVRGGSPKWSCDFQSNIMLKVSKPTMSTGCG
STAPPAPRDAGASSTVQQEEFTLDRAAFTRTLRVVALRLPTKLCNAAVKQ
LQNHVLRLRHVKAILKSDDGNDERRVVLLATEVEEGKTGDDITLADLPAP
VKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEEVLKQFF
APLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPRIRTVVN
KTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWNSRLSTE
HGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKGCVVHAN
DLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPVHHVIMN
LPASALEFLDEFSAQREREEEGKEGQEEEEEEAEGLFDYLEERPYVHVHC
FSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEMLCISFP
LPRYSELRRGGGGGKRGTKRTLDEEGKGDSKAVVQSNAKEE*
back to top

protein sequence of NO19G02020.2

>NO19G02020.2-protein ID=NO19G02020.2-protein|Name=NO19G02020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MSTGCGSTAPPAPRDAGASSTVQQEEFTLDRAAFTRTLRVVALRLPTKLC
NAAVKQLQNHVLRLRHVKAILKSDDGNDERRVVLLATEVEEGKTGDDITL
ADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEE
VLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPR
IRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWN
SRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKG
CVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPV
HHVIMNLPASALEFLDEFSAQREREEEGKEGQEEEEEEAEGLFDYLEERP
YVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEM
LCISFPLPRYSELRRGGGGGKRGTKRTLDEEGKGDSKAVVQSNAKEE*
back to top
Synonyms
Publications