jgi.p|Nanoce1779_2|545406, gene_7603 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|545406
Unique Namegene_7603
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:356946..360899 +

Link to JBrowse

Properties
Property NameValue
TranscriptId545492
ProteinId545406
Product nameMet-10 like-protein-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:356946..360899 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02020NO19G02020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545406mRNA_7603-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545406mRNA_7603Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|545406

>mRNA_7603-protein ID=mRNA_7603-protein|Name=jgi.p|Nanoce1779_2|545406|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MSTGCGSTAPPAPRDAGASSTVQQEEFTLDRAAFTRTLRVVALRLPTKLC
NAAVKQLQNHVLRLRHVKAILKSDDGNDERRVVLLATEVEEGKTGDDITL
ADLPAPVKAFVEAAKEEQASDPIISSSPSSPISLTIHQVIMDYNCFTVEE
VLKQFFAPLQMEAPTSFETIDHVAHINLRDAYLPYKRLIAQVILDKNSPR
IRTVVNKTGNIETRFRTFPLEVLAGENNLEVSVRESGATFHFNYAEVYWN
SRLSTEHGRLIHSITKQFQARHPRSPLAACVVWDVFAGVGPFAVPLGVKG
CVVHANDLNPRSHHYLLANINKNKVDCHVTPYNEDGRVFLRERARRRLPV
HHVIMNLPASALEFLDEFSAQREREEEGKEGQEEEEEEAEGLFDYLEERP
YVHVHCFSKADDPTTEALAHASDALGCELLNGKNGVSVHRVRDVAPKKEM
LCISFPLPRYSELRRGGGGGKRGTKRTLDEEGKGDSKAVVQSNAKEE*
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Synonyms
Publications