NO17G02730, NO17G02730 (gene) Nannochloropsis oceanica

Overview
NameNO17G02730
Unique NameNO17G02730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4286
Alignment locationchr17:799654..803939 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:799654..803939 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010775DUF1365
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO17G02730 vs. NCBI_GenBank
Match: EWM24159.1 (Protein of unknown function DUF1365 [Nannochloropsis gaditana])

HSP 1 Score: 381.3 bits (978), Expect = 4.000e-102
Identity = 203/347 (58.50%), Postives = 233/347 (67.15%), Query Frame = 0
Query:    4 PSSSTLLHALPQSLPLLLMHTFLTLPFLLFCVAGLLSLRPSHARRNLGLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRER 351
            P SST         PL+L+ TF+ +PFL+ CV GLLS RPSH RR LG SCLYVGRVWHVRFLPT+HKF YGLFYTYLDL                             D LPQTF G+WPLASFSTLA+P+ LPA AHFHEADHLKD+P++Y  SS P             XXXX          ERVRRLV ++TG+RP+G+I LLTHLRYMGY FNPVSFYYVWD+EG+ +ETVVAEVSNTPWNEMHCYVL P +  + A     +  K++       GGK EEVW YVF+K FHVSPFMDMAH+YDWEFV PREG  ++G E     GMWVTTHMLKKE +ER
Sbjct:   31 PPSSTSSAFFSSVWPLVLLVTFVIVPFLVLCVRGLLSSRPSHTRRPLGFSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDL-----------------------------DCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFP-------------XXXXXXXXXXXXXXERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKAT----RMLKLRSVAGTRAGGK-EEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPREGRAEEGAE----RGMWVTTHMLKKEGKER 326          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: CBN76849.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 236.9 bits (603), Expect = 1.200e-58
Identity = 150/401 (37.41%), Postives = 195/401 (48.63%), Query Frame = 0
Query:   55 LYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKD----IPI------------------------QYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRP-FSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHPEGTQTWASAAVGTLMAPLWKLQ 427
            +Y GRVWH RF PT H F Y +FY  +DL +                 D   P +            +WP+ S       + LPAL+ F  ADHLK      P+                                 XXXXX             P +   L +RVR +VE+ TG RP G++ LLTHL Y+GY FNPVSFYY  D+  + +ETVVAEVSNTPW EMHCYVL+P    V  + K     K  D   +      +E+  Y FEK FHVSPFM M H YDW+F  P         +   G+G+   T +L+  S + +F A   +  +P FS  +  W +  +PL T  VQ LIH+QAF+LW K+VPF+ HPEG +T AS  V  +M PL+  Q
Sbjct:   53 VYAGRVWHARFKPTAHHFSYPIFYCLVDLDEL----------------DIAFPWY------------IWPVGS-------ARLPALSRFRSADHLKGRGAATPVFXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXGPSRARATAATSSPPLSSSLADRVRDIVEEATGARPTGRVQLLTHLAYLGYCFNPVSFYYCLDKTEREIETVVAEVSNTPWGEMHCYVLNPKTKGVQVIAK----DKSNDNDNNTSKRGTKEITRYRFEKDFHVSPFMSMKHTYDWKFTAP---------DASPGSGLMAQTTLLESGSGKVFFDAKLVLRRQPCFSAAALCWHMTAYPLYTVWVQVLIHYQAFRLWWKQVPFFPHPEGAETAASRLVAVVMTPLFNAQ 405          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: GAX22178.1 (hypothetical protein FisN_19Lh238 [Fistulifera solaris])

HSP 1 Score: 181.8 bits (460), Expect = 4.600e-42
Identity = 129/379 (34.04%), Postives = 173/379 (45.65%), Query Frame = 0
Query:   53 SCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKR-----PKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHPEGTQTWASAAVGTLMAPLWKLQ 427
            S LY GRVWH RF P  H F Y LF   LDL +++   E                  L P H+      LWPL+             + +F   DHLK+   Q  SS   +                        L ER+  LV + T +R        +I L THL Y GY FNPVSFYY+ ++     + VV EVSNTPWNEMHCYVL  H A+V             D       G + ++ NYVF K FHVSPFM+MA+ YDW F    +            + + +   M      +  F A   ++ +    +  A+ V  FP+  + +Q  IH++AF+L+ K V F  HP+GT+TWAS A+G  M PL+ LQ
Sbjct:   55 SALYYGRVWHTRFKPVAHSFTYPLFLFGLDLHEEIEEQE------------------LFP-HV------LWPLS------------LIMNFRSEDHLKN---QEGSSHTSTKKKKKN------------------LSERLLTLVAERTQQRFQPTTETHRILLFTHLAYYGYCFNPVSFYYLQNKTTNKTDAVVGEVSNTPWNEMHCYVL--HEASVD------------DVATSVLLGTDTQI-NYVFPKKFHVSPFMEMAYKYDWTFAEKLD------------STVTIINEMRSLTDNQLCFRAKMQVERKSLHPVQLAFYVTTFPIYCFIIQLWIHYEAFQLFIKGVTFQPHPDGTETWASRAIGNAMRPLFALQ 348          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: GAX19654.1 (hypothetical protein FisN_19Hh238 [Fistulifera solaris])

HSP 1 Score: 177.6 bits (449), Expect = 8.800e-41
Identity = 127/381 (33.33%), Postives = 168/381 (44.09%), Query Frame = 0
Query:   53 SCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSG-LWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGK-----RPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLK-KESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHPEGTQTWASAAVGTLMAPLWKLQ 427
            S LY GRVWH RF P  H F Y LF   LDL                             + + + FS  LWPL+             + +F + DHLK+     A+S+  +                        L ER+  LV + T +     R   +I L THL Y GY FNPVSFYY+ ++     + VV EVSNTPWNEMHCYVL  H A+V             D       G      NYVF K FHVSPFM+M++ YDW F    +            T + +   M    +  +  F A   ++ +    L  A  V  FP+    +Q  IH++AF+L+ K V F  HP+GT+TWAS A+G  M PL+ LQ
Sbjct:   28 SALYSGRVWHTRFQPVAHSFTYPLFLFGLDL-----------------------------EEVEELFSHVLWPLS------------LIMNFRQKDHLKNQEGLSATSTKKT------------------------LSERILILVAERTQQRFRPTRETHRILLFTHLAYYGYCFNPVSFYYIQNKTSGKTDAVVGEVSNTPWNEMHCYVL--HEASVD------------DVATSVVLGTNTSQINYVFPKQFHVSPFMEMSYKYDWTFAEKLD------------TTVTIINEMRSLTDHNQLCFRAKMQVERKSLHPLQLALYVTTFPIYCLIIQLWIHYEAFRLFLKGVTFQPHPDGTETWASRAIGNAMRPLFALQ 317          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: KPK25236.1 (chromosome partitioning protein ParA [Desulfobacterales bacterium SG8_35_2])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 119/353 (33.71%), Postives = 158/353 (44.76%), Query Frame = 0
Query:   53 SCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHPE 406
            SC+Y G ++H R+LP  ++F Y +F+ YLDL                             D L   F   W L S            +A+F  AD+L    I                                PL E VR  VE+E G+RP G I LLTHLRY G+ FNPVSFYY +D    ++E +VAE++NTPW E H YVLS   A  S  K  RKR                    + F K FHVSPFMDM   Y+W F  P E  R                HM+  +   ++F A  +M  +  S  + AW ++RFP +T  V  +I++QAF+LW KK P+Y+HP+
Sbjct:    3 SCIYKGELYHHRYLPRENRFTYAVFFMYLDL-----------------------------DELEHVFENYW-LWSVDR-------ANVANFKRADYLGPAEI--------------------------------PLDEAVRNRVEQELGERPVGTIRLLTHLRYFGHCFNPVSFYYCFDVTDTYVEYIVAEITNTPWRERHAYVLS---AKQSMEKGSRKR--------------------FSFSKNFHVSPFMDMDFRYEWSFEDPCESLR---------------IHMVNFKKEAKFFEAMLTMQRQEISSDALAWVLMRFPAMTIKVLAMIYWQAFRLWLKKTPYYEHPK 248          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: WP_035606560.1 (DUF1365 domain-containing protein [Hylemonella gracilis] >EYC50935.1 chromosome partitioning protein ParA [Hylemonella gracilis str. Niagara R])

HSP 1 Score: 175.3 bits (443), Expect = 4.400e-40
Identity = 119/352 (33.81%), Postives = 154/352 (43.75%), Query Frame = 0
Query:   53 SCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHP 405
            S LYVGRV H RF P  H F YGL+  YLDL +                             L + F+G W    +ST        ALA F   D+L D                                  LPL E VR+ V + TG+RP G I +LTHLRY GY FNPV+FYYV D     LET+VAE++NTPW E HCYVL                         DE     ++  + F K FHVSPFM M   YDW F  P               G  ++ HM   ++ ++ F A  +++ +P +  + A  +L +P +T  V   IH+QA KLW K+ PF+ HP
Sbjct:    3 SALYVGRVRHRRFQPRPHDFRYGLYMVYLDLAE-----------------------------LDRVFAGRW---FWSTRRM-----ALARFRREDYLGD--------------------------------PALPLDEAVRQRVAQATGRRPTGPIRMLTHLRYFGYVFNPVTFYYVHDAADTRLETIVAEITNTPWKERHCYVL-----------------------PQDEQAPRPDLHRHRFTKDFHVSPFMPMEQDYDWRFTPP---------------GETLSVHMENLQAGQKIFDATLALERKPLTGANLARALLFYPAMTVQVIVGIHWQALKLWLKRTPFHIHP 247          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: WP_081463440.1 (DUF1365 domain-containing protein [Hylemonella gracilis])

HSP 1 Score: 172.6 bits (436), Expect = 2.800e-39
Identity = 120/359 (33.43%), Postives = 155/359 (43.18%), Query Frame = 0
Query:   46 ARRNLGLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHP 405
            +RR    S LYVGRV H R LP  H F YGLF  YLDL +                             L + F+G W    +ST        ALA F   D+L D                                  LPL E VR  V + TG+RP G I +LTHLRY GY FNPV+FYYV D     +ET+VAE++NTPW E H YVL                         D    + ++  + F K FHVSPFM M   YDW F  P               G  ++ HM   ++ ++ F A  +++ RP +  + A  +L +P +T  V   IH+QA KLW K+ PF+ HP
Sbjct:   13 SRRAPMFSALYVGRVRHRRLLPRPHDFRYGLFMVYLDLAE-----------------------------LDRVFAGRW---FWSTRRM-----ALARFRREDYLGD--------------------------------PALPLDEAVRLRVAQATGQRPTGPIRMLTHLRYFGYVFNPVTFYYVHDAADTRVETIVAEITNTPWKERHSYVL-----------------------PQDAHAPKPDLHRHRFTKNFHVSPFMPMEQEYDWRFTSP---------------GETLSVHMENLQAGQKVFDATLALERRPLTGANLARALLFYPAMTLQVVVGIHWQALKLWLKRTPFHIHP 264          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: XP_002183207.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45425.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 172.2 bits (435), Expect = 3.700e-39
Identity = 134/411 (32.60%), Postives = 184/411 (44.77%), Query Frame = 0
Query:   20 LLMHTFLTLPFLLFCVAGLLSLRPSHARRNLGLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLV-ERVRRLVE-KETGK-RPKGK---ICLLTHLRYMGYTFNPVSFYYVWDEEGQH-LETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHPEGTQTWASAAVGTLMAPLW 424
            L++ T L LP +L   A +  LR          S L+VGRVWH R  PT H F Y LF   LDL  + +  E   L                          LWPL+             +  +   DHLK    Q   SS                   QR L    L+ +++   V  K  GK +P  K   I L+THL Y GY FNPVSFYY+ D         +VAEVSNTPWNEM+CYVL P + ++  V                   + E+  NYVF+K FHVSPFM+M ++YDW F        +    GG  + + V T M K+      F A  ++  +    L+ AW ++ +P     +Q  IH++AF L+AK + F  HP G ++ AS A+G++M P +
Sbjct:   23 LILVTLLALPLIL---AQIARLRQPACVWKSRRSSLFVGRVWHTRHRPTKHAFTYPLFIFALDL--QEVEDEDNGLFEKQ----------------------LWPLS------------WIISYRPTDHLKGHTAQVQRSS------------------GQRRLRNSSLLSQKIYEFVALKTNGKFQPSDKTHRIVLVTHLSYYGYCFNPVSFYYLLDNSSNSTTAAIVAEVSNTPWNEMYCYVLHPDSEDIKTV------------------SRREDSTNYVFQKNFHVSPFMEMDYVYDWVF--------RDFDGGGIPSNIHVATGM-KRVDGSLQFLATMNVHRKGMDPLTLAWQIVSYPFYCVIIQIWIHYEAFWLFAKGITFQPHPTGAESMASRAIGSIMTPFF 349          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: OUU36668.1 (hypothetical protein CBC11_11725 [Proteobacteria bacterium TMED51])

HSP 1 Score: 172.2 bits (435), Expect = 3.700e-39
Identity = 120/355 (33.80%), Postives = 147/355 (41.41%), Query Frame = 0
Query:   53 SCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHPEGT 408
            S  Y GRVWH R  P  H FGY LF  YLDL                             D LP  F   W  +        +  PALA F  ADHL D      +S                                V  LVE+E G+ P+G I LLTHLRY GY  NPVSFY+ WDE G  +E VVAEV+NTPW E HCYV+  +   V+A  K                        + F+K FHVSPFM M   Y W+F  P +  R                 M   E     F+A   +  R  S  +    +LRFPL+T  V   I++QA +LW K+VPF  HP+ +
Sbjct:    3 SRFYFGRVWHQRKXPRPHGFGYRLFMVYLDL-----------------------------DELPMLFDPYWLWS--------AKRPALAWFCRADHLGDRKQSLKAS--------------------------------VAALVEREEGRAPQGSITLLTHLRYFGYCMNPVSFYFCWDESGSRVEFVVAEVNNTPWGEQHCYVMH-YPEGVTAENK-----------------------VFEFDKAFHVSPFMKMEQRYRWQFSQPDDRLR---------------VRMRSFEGASEMFSAILDLHAREVSAQTLRHALLRFPLMTVRVVTAIYWQALRLWLKRVPFVPHPDAS 249          
BLAST of NO17G02730 vs. NCBI_GenBank
Match: EGI77611.1 (hypothetical protein HGR_05454 [Hylemonella gracilis ATCC 19624])

HSP 1 Score: 171.0 bits (432), Expect = 8.200e-39
Identity = 118/352 (33.52%), Postives = 152/352 (43.18%), Query Frame = 0
Query:   53 SCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQHPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSXXXXXXXXXXXXXXXXQRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPFYDHP 405
            S LYVGRV H R LP  H F YGLF  YLDL +                             L + F+G W    +ST        ALA F   D+L D                                  LPL E VR  V + TG+RP G I +LTHLRY GY FNPV+FYYV D     +ET+VAE++NTPW E H YVL                         D    + ++  + F K FHVSPFM M   YDW F  P               G  ++ HM   ++ ++ F A  +++ RP +  + A  +L +P +T  V   IH+QA KLW K+ PF+ HP
Sbjct:    3 SALYVGRVRHRRLLPRPHDFRYGLFMVYLDLAE-----------------------------LDRVFAGRW---FWSTRRM-----ALARFRREDYLGD--------------------------------PALPLDEAVRLRVAQATGQRPTGPIRMLTHLRYFGYVFNPVTFYYVHDAADTRVETIVAEITNTPWKERHSYVL-----------------------PQDAHAPKPDLHRHRFTKNFHVSPFMPMEQEYDWRFTSP---------------GETLSVHMENLQAGQKVFDATLALERRPLTGANLARALLFYPAMTLQVVVGIHWQALKLWLKRTPFHIHP 247          
The following BLAST results are available for this feature:
BLAST of NO17G02730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24159.14.000e-10258.50Protein of unknown function DUF1365 [Nannochlorops... [more]
CBN76849.11.200e-5837.41conserved unknown protein [Ectocarpus siliculosus][more]
GAX22178.14.600e-4234.04hypothetical protein FisN_19Lh238 [Fistulifera sol... [more]
GAX19654.18.800e-4133.33hypothetical protein FisN_19Hh238 [Fistulifera sol... [more]
KPK25236.11.100e-4033.71chromosome partitioning protein ParA [Desulfobacte... [more]
WP_035606560.14.400e-4033.81DUF1365 domain-containing protein [Hylemonella gra... [more]
WP_081463440.12.800e-3933.43DUF1365 domain-containing protein [Hylemonella gra... [more]
XP_002183207.13.700e-3932.60predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OUU36668.13.700e-3933.80hypothetical protein CBC11_11725 [Proteobacteria b... [more]
EGI77611.18.200e-3933.52hypothetical protein HGR_05454 [Hylemonella gracil... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR029ngnoR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642524gene_9342Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100741g1gene6310Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02730.4NO17G02730.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02730.3NO17G02730.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02730.2NO17G02730.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02730.1NO17G02730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02730.4NO17G02730.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02730.3NO17G02730.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02730.2NO17G02730.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02730.1NO17G02730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02730 ID=NO17G02730|Name=NO17G02730|organism=Nannochloropsis oceanica|type=gene|length=4286bp
CTTGGCACTTTAATACATTCTTTTACATGGCATGTACATTGCTCCCGGCT
AATCTTTTTCAATTTCTCCCTCACTCTGAAATGTCTGTGGCACTTCAATG
CCCGCTACACCCAGCGCTTCCCTCACCCACTCAGGCACTGTCACATCTAC
TTTTTCTCCTTTCTTCCCAGCAATCTCACCAGAATAGTGAGCTTTCAAAA
ACGCCAATACAAAGCTAGGAAAAGCGTCTCCTCCCTCCATAATCGCCTTT
CGCATTCTTCGCATCAATCCGAGCATGTAAGCGAGGTTGTGGTACGTGAC
TAATTGACACCCCAGAGCTCCCGACTTGAGCAACCGGTGTATCGCTGCGC
GCGAGTAGTTCTTGCACGTCATGCACTGACACCCCTCTTCGATAGGTTTG
CCCGTCTCATTCCCACATGCGTTGTTCTTAAGCTTCAAAACCCCCGTTCC
AACAAGCGCGACGCCAAATCTGGCCGTGCGAGTGGGGTAGACACAGTCAT
ACATATCCACGCCCAACGCCGTGCACACCACCAAGTCTAGCGGATAGCCG
ACACCCATCAAATACCTCGGTTTCCCCTCGGGTAAACCCGCGGCAGACTG
TGCCACCACCTTCCAAAATGCTTCCTTGCTCTCTCCACCCGCTAGACCCC
CAATCGCGTAACCTGGACAGTCGCGGGCGATCATTTCGCGCAGGCACCCT
TCCCGCAATCCGCCCGGGGAAGTATCCAACCCCCCCTGAATGATGCCGAA
CAGATTCTGTTCTTGCGGTCGAGAGTGTGCTTGTATGCACCGATCTAACC
ACCGGATGGATCGCGCGGTGGCTTCACGGAAGCGGTCGTCGTTCTCAGTG
ACAGAAGACACGACATCGTCAAGCTGCATCATTATATCGGACCCTATCCG
GTTTTGGTGCGCAATGGACATCTCAGGCGTCAGCAGCATCTGCGTCCCAT
CGATAGGGCTTTGAAACGTCACACCTTCCTCCGTGATCTCGGCCAAGGCC
AAGAGGGAGACCATCTGGAATCCTCCCGAGTCGGTGAGGAGGTTGCGAGG
CCAGTTCATAAATTTGTGCAAGCCCCCCATTTCCTCCAGCAGGTCCGTCC
CCGGCTGCAAGGCGAGGTGGTATGTGTTCCCCAGAATAATCTGAGGAGAA
AGTTCTGGATGGAGTAATTGTTCGGTTGGGATGCCTTTAATTGTGCCCTT
GGTGCCCACGGGCATGAAGACAGGCGTCGCGAGGGGACCGTGGGGCAAGT
GGACGGTGGCGGCCCTTGCGCGTCGCCATCGAGCGTGGATGTGAAAGCAG
AGGGCAGGGGAGGCCGCCGTGAATGTGGGCGGGATACCTTCCTCGACGAG
AGGTGGTGCGGAAATTGGTGGGGGTGGTGACACTTCGGTCTCGTCGGGCA
TGAGGCCAGGGATGGTGGTGGGTAGGAGGATGCGAAAAGTAGTGGTGGAA
GCAGAGGCGGGAGGAGGGTTCCAACGAGGCCGGCTTCTGCAGGAACTGAT
GCTGATGCTAGTGCTGCTGGTGGTGACTGCCTGTGTGATGTGTTGACAAT
AAGTAAAATGATTGTATGGGTTAGCGCCCAGAGAGCGAGGGAGGAGGTCA
ACGCTTCTCCCGACACATCTCTTCAACCAACGGCCACGAGCCGCAGCCCT
CCAAAACATATAACAACACATCCATGCATATACTGAATGTCCGCCCTTTA
CTTCCACGTCCCCGAAAAATAGAAGGCGTTAACCCGTATCCCCTGTACAA
TGTCCAACTACAGAGAGCGCCCCCCCATCACAGAGACGGGCAGGCAGGGC
TGAGGCGAAGACCGACACGGCACCATCATGAGGCTCCCCTCCTCCTCAAC
CCTCCTCCATGCCCTTCCCCAATCTCTACCCCTCCTCCTCATGCACACAT
TTTTGACTCTGCCCTTTCTTCTGTTCTGCGTGGCTGGACTCCTGTCTCTG
CGCCCTTCCCACGCCCGTCGCAACCTCGGATTGTCCTGCCTGTATGTTGG
GCGAGTCTGGCACGTGCGCTTCCTCCCGACCATCCACAAGTTCGGATACG
GCCTCTTTTACACGTATTTGGACCTCGGTAAGAAGGTAATCACAGGGGAG
AAATGTGTCCTCATCTCCTCCCCTCAACACCCCGACTTTCTTTCTCCCTC
CTTCCTCCTTCCAGACCACCTCCCTCAGACCTTCAGTGGACTGTGGCCTC
TCGCTTCCTTCTCGACCCTTGCCGCCCCCTCCCTCCTTCCCGCCCTCGCC
CACTTCCATGAAGCCGACCACTTGAAAGATATCCCCATCCAGTACGCTTC
ATCCTCGCTCCCTTCCAACTCCTCTTCTTCCCCGCCCAAGGAGGGAGGGA
AGGAGGGAGGGCAGCAGCGACCACTCGTGCCTCTACCACTGGTAGAAAGG
GTGCGGCGGTTGGTGGAGAAAGAAACAGGCAAGCGGCCTAAGGGTAAAAT
TTGCCTTTTGACACATTTAAGATACATGGGTTATACATTCAACCCGGTCA
GTTTTTACTATGTGTGGGATGAAGAGgtacggaacgagggagggagggag
ggcgggagagagagagggaaggacagacagacttgatcgttggactgtac
ttaccatttttcttccctccctttccccttccagGGCCAGCATCTTGAGA
CAGTCGTGGCTGAGGTAAGCAACACCCCTTGGAATGAGATGCACTGCTAC
GTCCTCAGCCCGCACGCGGCCAATGTCTCCGCCGTGAAAAAATGGAGGAA
AAGACAGAAAATGAAGGACGGAGGGGAGGATGACGAAGGCGGGAAGGAGG
AAGAGGTGTGGAACTACGTGTTCGAAAAGACGTTTCATGTCTCGCCGTTT
ATGGACATGGCCCATATCTACGATTGGGAGTTTGTGGGGCCGAGGGAGGG
AGGAAGGAAGAAAGGGAGGGAGGGAGGGGCAGGCACTGGGATGTGGGTGA
CGACGCACATGCTCAAGAAGGAGAGCAGGGAACGgtaggggcattggagg
gagggaaggagggataggtggatggagggagggagggaaggagggagggg
tacctggatccgggtatgtgtgaacctaagtgttctctctctcctgcctt
cctggtatatagtgtgtgtgtgtgtgtgtgtgcatgtctcctgcctgacg
tggatccgggtatgtgtgaacctaagtgttctctctcttccttgtctctt
ccgaaatccgggagagactttggaggatttttatttcccatgttgtagca
gcagcggcagcagcggcagcagcacattaatgtttgtcctcccgggctcg
cctactcgcaattggttcgaccgtacccggaaggctcatcccatgtgcca
tagcagactcttactcctcgcgcccttttattccctccctgcctcgcgct
ctagaggcagggggggggggtgcgtcgggatataccataattatacctct
tgccctcttttcctccttccgcggccatctgcgcgattttgttttctttc
cttccctcttgatgttctcctctccttgcccaggcttgtgtgtggttttg
tccctacccccgttggcttttgctctctcgcttctaccatgaccctgcta
tctaccattcgccttatccttccctccctcccttcctccgtcccttcctc
cttccctccctccctcccttcctccctcccttcctccctcccttcctccc
tcccttcccagCTATTTCACGGCCCACTTCTCCATGGATCATCGCCCATT
CTCCCTCCTCTCCTTCGCCTGGTGCGTCCTCCGTTTCCCCCTCATCACCT
GGGCAGTCCAATTTCTAATCCATTTCCAGgtaggcaggcagggagggagg
gagggagggacggacggaggaaggggaggattagcacagcagggaggggg
gcaacgtactgatttctagaacgtttttgtaatttaaatttttaaaaatg
gtcacagGCCTTCAAACTCTGGGCAAAAAAGGTGCCTTTCTACGACCATC
CAGAAgtaagccccttcctccctttctccctccctccctccctccctccc
tccctccctcttttgtggatgcctacaggaatgaagtgctttatcaaaag
taagttgacgttttcttttcaacacctgccctcctttccctttcctccct
tcctcctaccctccctcagGGCACTCAGACCTGGGCCTCGGCCGCCGTGG
GCACTTTGATGGCTCCTCTGTGGAAGCTCCAAGCCCGGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGAAGAAGACGGAGTAG
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protein sequence of NO17G02730.4

>NO17G02730.4-protein ID=NO17G02730.4-protein|Name=NO17G02730.4|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MRLPSSSTLLHALPQSLPLLLMHTFLTLPFLLFCVAGLLSLRPSHARRNL
GLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQ
HPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLK
DIPIQYASSSLPSNSSSSPPKEGGKEGGQQRPLVPLPLVERVRRLVEKET
GKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWN
EMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTF
HVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRER
*
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protein sequence of NO17G02730.3

>NO17G02730.3-protein ID=NO17G02730.3-protein|Name=NO17G02730.3|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MRLPSSSTLLHALPQSLPLLLMHTFLTLPFLLFCVAGLLSLRPSHARRNL
GLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLDHLPQTFSGLWPLASFS
TLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSNSSSSPPKEGGKEGGQ
QRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYV
WDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDG
GEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGRE
GGAGTGMWVTTHMLKKESRER*
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protein sequence of NO17G02730.2

>NO17G02730.2-protein ID=NO17G02730.2-protein|Name=NO17G02730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MRLPSSSTLLHALPQSLPLLLMHTFLTLPFLLFCVAGLLSLRPSHARRNL
GLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLGKKVITGEKCVLISSPQ
HPDFLSPSFLLPDHLPQTFSGLWPLASFSTLAAPSLLPALAHFHEADHLK
DIPIQYASSSLPSNSSSSPPKEGGKEGGQQRPLVPLPLVERVRRLVEKET
GKRPKGKICLLTHLRYMGYTFNPVSFYYVWDEEGQHLETVVAEVSNTPWN
EMHCYVLSPHAANVSAVKKWRKRQKMKDGGEDDEGGKEEEVWNYVFEKTF
HVSPFMDMAHIYDWEFVGPREGGRKKGREGGAGTGMWVTTHMLKKESRER
YFTAHFSMDHRPFSLLSFAWCVLRFPLITWAVQFLIHFQAFKLWAKKVPF
YDHPEGTQTWASAAVGTLMAPLWKLQARQQQQQQQQQQQKKTE*
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protein sequence of NO17G02730.1

>NO17G02730.1-protein ID=NO17G02730.1-protein|Name=NO17G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MRLPSSSTLLHALPQSLPLLLMHTFLTLPFLLFCVAGLLSLRPSHARRNL
GLSCLYVGRVWHVRFLPTIHKFGYGLFYTYLDLDHLPQTFSGLWPLASFS
TLAAPSLLPALAHFHEADHLKDIPIQYASSSLPSNSSSSPPKEGGKEGGQ
QRPLVPLPLVERVRRLVEKETGKRPKGKICLLTHLRYMGYTFNPVSFYYV
WDEEGQHLETVVAEVSNTPWNEMHCYVLSPHAANVSAVKKWRKRQKMKDG
GEDDEGGKEEEVWNYVFEKTFHVSPFMDMAHIYDWEFVGPREGGRKKGRE
GGAGTGMWVTTHMLKKESRERYFTAHFSMDHRPFSLLSFAWCVLRFPLIT
WAVQFLIHFQAFKLWAKKVPFYDHPEGTQTWASAAVGTLMAPLWKLQARQ
QQQQQQQQQQKKTE*
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