NO09G00120, NO09G00120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00120 vs. NCBI_GenBank
Match: EWM27799.1 (uv excision repair protein rad23 [Nannochloropsis gaditana]) HSP 1 Score: 271.6 bits (693), Expect = 3.400e-69 Identity = 214/337 (63.50%), Postives = 245/337 (72.70%), Query Frame = 0 Query: 1 MVLIKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAALEGGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLLLGG 338 MV IK KT+QG++FS+DGV+L+QT+N+LKAAVEA+PP+GE PADRLKLIHQGKEL +G +TLS+Y++ +NDL+IVML+R KP XXXXXXXXXXXXXXXXXXXXXXXXX VEQLKEMGFPESQV AALRAA D ++A+EFLFSGNIP+SP+ L AVG + G + VAQ LSHPEME IRR+VRENPS MES VR+INEDP SFWAALE XXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ RLMEMGFGREQVVEAY+L+GK+EN AVNLLLGG Sbjct: 28 MVSIKLKTIQGREFSVDGVELSQTINDLKAAVEASPPSGEVLPADRLKLIHQGKELTQGDSTLSAYNIADNDLVIVMLTRHKPPXXXXXXXXXXXXXXXXXXXXXXXXXH---------------VEQLKEMGFPESQVTAALRAAQNDADLAVEFLFSGNIPSSPAPLSA----------LESAVGVERDAERAAEEEAGAG-TNATVVAQLLSHPEMERIRRVVRENPSGMESMXXXXXXXXXXLVRIINEDPASFWAALE-------ENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIARLMEMGFGREQVVEAYILSGKEENAAVNLLLGG 331
BLAST of NO09G00120 vs. NCBI_GenBank
Match: XP_001745356.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ89934.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 89.4 bits (220), Expect = 2.400e-14 Identity = 137/333 (41.14%), Postives = 184/333 (55.26%), Query Frame = 0 Query: 4 IKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPKP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAALEGGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLLL 336 + KT++ F L + T+ E+KAA+E + G+ +P D LK+I+QGK L + ++TL+S + E D ++VM S+ KP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +L MGF QV AALR A + + A E+L +G +PA + PA GE + ++ + S+P +R++V+E P + S + +A S+PD V LINE+ F+ L E XXXXXXXXXXXX AV RL ++GF R ++AY+ KDEN A N LL Sbjct: 3 VTIKTIKDGTFDLQ-MGDDATIGEVKAAIEQS--KGDKYPKDGLKVIYQGKVLGD-SDTLASANFQEKDFLVVMASKAKPKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDVNRLMNMGFDRPQVEAALRRAFGNPDRAAEYLTTG-MPAEEAPSMDATPDE-------PAGGEGEAVVP-------QELSEDSPLYFLASNPSFLQLRQLVQEQPHLLPSMLQQIAASNPDLVSLINENQEDFYILLNA---EDENGGAPMPGAGXXXXXXXXXXXXVQLTQEEMAAVERLSQLGFDRNLALQAYIACEKDENMAANWLL 313
BLAST of NO09G00120 vs. NCBI_GenBank
Match: CBJ25906.1 (UV excision repair protein RAD23B homolog [Ectocarpus siliculosus]) HSP 1 Score: 84.0 bits (206), Expect = 1.000e-12 Identity = 112/265 (42.26%), Postives = 156/265 (58.87%), Query Frame = 0 Query: 1 MVLIKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSG---NIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAAL 263 MV + KT++GK F ++ V+ TQTV E+K +E FPA +LKLIH G ++++ TL+ Y + E + ++ M++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V QL EMGFPE QV AALRAA + +VA+EFL +G NI A+ + PA + G + T+ F HP+ ++R+V+ +P+ + S + + P+ + I+E+ F A + Sbjct: 1 MVKLTVKTIKGKKFQIE-VEQTQTVREVKGVIE---EQNAEFPAAQLKLIHSG-QILKDECTLAEYKIKEEEFLVCMVT--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAA----------------PA----------QAAAAPTGAME--TLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALM 230
BLAST of NO09G00120 vs. NCBI_GenBank
Match: XP_012766530.1 (DNA repair protein Rad23, putatitve, putative [Babesia bigemina] >CDR94344.1 DNA repair protein Rad23, putatitve, putative [Babesia bigemina]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 82/335 (24.48%), Postives = 126/335 (37.61%), Query Frame = 0 Query: 4 IKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM---VEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAALEGGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLLL 336 +K KTL + +D V+ TV +L AVEAA PA P+DR KLIH GK L + + D +IV+ S+ P + + ++ EMGFP ++V A+ AA + A+EFL +GNIP SP L P V + +M + +++ SHP + IR+ + +P ++ + + ++P+ ++ I E F L G V RL +GF R V+EA+L K+E A N LL Sbjct: 3 LKIKTLNNLEAEVD-VEADITVADLMKAVEAALPA---LPSDRQKLIHSGKVLKRELRLSDYSDIKDGDKVIVITSKQPPTVSTAPVVEQPVSPPEVQPSATAVSTEPLASASSRFVTGSELEMNISRICEMGFPRAEVEQAMAAAFNNPERAVEFLSTGNIP-SPGDFL-----------LNPGVDD-----HQPSNNAMHAASQDVSLQSIQSHPAFQQIRQALNSDPQMLQQLLENIGSTNPELLQNIVEHQDEFMNMLNSAG------------GADPLLSGDDGPAVVQLTEEDVAIVERLEGLGFPRPAVIEAFLACDKNEEMAANYLL 304
BLAST of NO09G00120 vs. NCBI_GenBank
Match: XP_002291659.1 (Rad23 like protein, partial [Thalassiosira pseudonana CCMP1335] >EED91766.1 Rad23 like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.4 bits (202), Expect = 2.900e-12 Identity = 126/361 (34.90%), Postives = 180/361 (49.86%), Query Frame = 0 Query: 7 KTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSR-------------PKP--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAALEGGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLL 335 KTL+G F+++ V+ +TV E+K A++ + PA +KLIH GK +++ + + S ++ ND ++VM+++ P P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++ LK +GFPES+V LRA+N + +VA+EFL +G P G+ XXXXXXXXXXX G D + SHP+ +++RR+V+ NPS++++ + + PD ++ IN + F + AV RL EMGF R + +AYL K+E A NLL Sbjct: 6 KTLKGGKFTVE-VEAEKTVAEVKVAIQ----TNKDLPASSMKLIHSGK-VLKDEDKIESCNIKPNDFLVVMIAKVSSWLCTIAKAATPAPTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEFPAEVIDNLKALGFPESEVRVCLRASNGNPDVAVEFLMNGIPP---------------GIGXXXXXXXXXXXXXXXXXXXXXGPLDALR-----SHPQFDDLRRLVQTNPSTLQAVLSQIGQQQPDLLQAINANQAEFLQMM-----NEPMISAMPQEQVQQYMNMAMQAQVLRLSEEEMAAVDRLTEMGFDRSEAAQAYLACDKNEALAANLL 335
BLAST of NO09G00120 vs. NCBI_GenBank
Match: OQR70238.1 (UV excision repair protein RAD23B-like [Tropilaelaps mercedesae]) HSP 1 Score: 82.0 bits (201), Expect = 3.800e-12 Identity = 107/359 (29.81%), Postives = 156/359 (43.45%), Query Frame = 0 Query: 1 MVLIKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPKP---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAAL---EGGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLLL 336 ++ + K L + F+++ + TV E+KA + G+ FPA KLI QG+ ++ L +Y + +++M+S+P P XXXXXXXXXXXXXXXXXXXXXXXXX MV + EMG+P QV ALRA+ + + A+E+L +G P G + A G GQ ++ + P+ + +R +RENP+ +ES I L ++PD +RLI ++ F L +G GEE A+ RL +GF VV+AY K+EN A N LL Sbjct: 2 LLTVSLKCLTNELFTIE-IDDECTVKEMKAKI--YEQKGDAFPAAHQKLIAQGR-IMADDEKLKAYELHNVKFVVIMVSKPAPAPAAPPGGAQAASKVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGESALVRGVDYESMVRNITEMGYPRDQVERALRASYNNPDRAVEYLVTGIPPEEDEPQIGVNLPATGGAGTVTAPG------------GPPGQGSEPPLSFLRTQPQFQQMRNAIRENPALLESIIQQLGSNNPDMLRLITQNQDEFMHLLNEEDGRGEE-------PLAALGEEIPGPPLRFEAHVTPADKEAIERLKALGFPEHLVVQAYFACEKNENLAANFLL 337
BLAST of NO09G00120 vs. NCBI_GenBank
Match: XP_008879471.1 (UV excision repair protein Rad23 [Aphanomyces invadans] >ETV91834.1 UV excision repair protein Rad23 [Aphanomyces invadans]) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-10 Identity = 101/278 (36.33%), Postives = 141/278 (50.72%), Query Frame = 0 Query: 7 KTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPK----------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAAL 263 KTLQG + ++ +L TV +K VEA A D KLIH GK L + + LS Y+V END ++VM+++PK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V QL +MGFPE QV AAL+AA + A+E+L +G IP P++ PA G G ++ HP+ + +RR+++ NPS++ + + + +P ++LI+++ F A L Sbjct: 6 KTLQGVSYPIE-AELEDTVLSVKGKVEAVNGAA----VDNQKLIHAGKVLKDDSK-LSEYNVKENDFLVVMVTKPKVVRKTAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGIVVGEALSETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNG-IPEQPAA--------PPASTTAPASG---------------GLGAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAML 253
BLAST of NO09G00120 vs. NCBI_GenBank
Match: CCI46099.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10 Identity = 113/282 (40.07%), Postives = 154/282 (54.61%), Query Frame = 0 Query: 7 KTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPK------------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSF 259 KTLQG FS++ +LT TV +K +E A + F A + KLIH GK L + T LS Y++ END I+VM+S+PK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V QL +MGFPE QV + L+AA + + A+E+L +G IP + + P VG ++ Q +HP+ + R +VR NP+++ + + + +P+ +RLI+E+ + F Sbjct: 6 KTLQGNAFSIE-AELTDTVAVVKTKIEEA----QEFQASQQKLIHAGKILKDDT-VLSEYNIRENDFIVVMVSKPKGSRPTSAVPSNTTAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVRQLCDMGFPEEQVRSCLQAAFGNPDRAVEYLMNG-IPENLVNPTTAAVPSTGS----PGVG---------------------SLEQLRNHPQFASFREVVRTNPAALPALLQQIGGQNPELLRLIHENQSQF 255
BLAST of NO09G00120 vs. NCBI_GenBank
Match: XP_023462147.1 (UV excision repair protein Rad23, partial [Rhizopus microsporus ATCC 52813] >PHZ08439.1 UV excision repair protein Rad23, partial [Rhizopus microsporus ATCC 52813]) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10 Identity = 122/382 (31.94%), Postives = 169/382 (44.24%), Query Frame = 0 Query: 4 IKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPK-------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSG------------------------NIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAA-LEGG-GEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLL 335 I KTLQ K F L+ V T ++ +K +E + + P + KLI GK ++ T+ Y++ E D ++VM+S+PK XXXXXXXXXXXXXXXXXXXXXXXX ++E + MGF +Q ALRA+ + + A+E+LF+G N P SP + L+L XXXXXXXXXXX AD +A F + P IR++V+ NP ++ + ++ S+P+ +R IN DP F A LEG GEE A+ RL +GF R+ V+EAY K+E A N L Sbjct: 2 ITVKTLQQKQFKLE-VDSTDSILSVKEKIEQS----QGHPVAQQKLIFSGK-ILSDDKTVEEYNITEKDFLVVMVSKPKATPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAEKVTTDITGSQLESVLENMMAMGFERAQCERALRASFNNPDRAVEYLFNGIPENILNEMNAAQQPQSDEQQQDTNTPISPGTTTAPTNDANAPLNLFAXXXXXXXXXXXXXXXXXXLGAD---LASFRNTPHFHQIRQLVQTNPGLLQPLLQSIGQSNPELIRAINADPNGFLQAFLEGAEGEE-----------------GGPETATIQVTAEEREAIERLEALGFPRQVVIEAYFACDKNEELAANYL 357
BLAST of NO09G00120 vs. NCBI_GenBank
Match: GBE60496.1 (UV excision repair Rad23 [Babesia ovata]) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10 Identity = 81/335 (24.18%), Postives = 119/335 (35.52%), Query Frame = 0 Query: 4 IKFKTLQGKDFSLDGVQLTQTVNELKAAVEAAPPAGETFPADRLKLIHQGKELVEGTNTLSSYHVCENDLIIVMLSRPK---PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVEQLKEMGFPESQVVAALRAANQDLNVAIEFLFSGNIPASPSSXXXXXXXXXXGLDLMPAVGEXXXXXXXXXXXSMRGQADHMTVAQFLSHPEMENIRRIVRENPSSMESAIGALAVSHPDFVRLINEDPTSFWAALEGGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRLMEMGFGREQVVEAYLLAGKDENGAVNLLL 336 +K KTL + +D V+ TV +L AVEAA P + P+DR KLIH GK L + E D +IV+ S+ P + ++ EMGFP + V A+ AA + A+EFL +GNIP S DL+ + R ++ SHP +RR + +P ++ + + ++P+ ++ I E F L G V RL MGF R V+EA+L K+E A N LL Sbjct: 3 LKIKTLNNLEAEVD-VEAGVTVADLMKAVEAALP---SLPSDRQKLIHSGKVLKRELRLSDYSDIKEGDKVIVITSKQPSTVPTAPAVEQPVSSTEVQPSAAAESTEPLASAASRFVTGSELEMNISRICEMGFPRADVEQAMAAAFNNPERAVEFLSTGNIPQSN--------------DLLLNSNVEDNQPSNNATHATRPDGSLQSIQ---SHPAFRQMRRALNSDPQMLQQLLENIGRTNPELLQSIVEHQDEFMNMLNSSGN------------PDPYSSSEEGPAVVHLTEEELAIVQRLEGMGFPRPAVIEAFLACDKNEEMAANYLL 304 The following BLAST results are available for this feature:
BLAST of NO09G00120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00120 ID=NO09G00120|Name=NO09G00120|organism=Nannochloropsis oceanica|type=gene|length=3367bpback to top protein sequence of NO09G00120.1 >NO09G00120.1-protein ID=NO09G00120.1-protein|Name=NO09G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bpback to top protein sequence of NO09G00120.2 >NO09G00120.2-protein ID=NO09G00120.2-protein|Name=NO09G00120.2|organism=Nannochloropsis oceanica|type=polypeptide|length=243bpback to top protein sequence of NO09G00120.3 >NO09G00120.3-protein ID=NO09G00120.3-protein|Name=NO09G00120.3|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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