Rad23, gene2754 (gene) Nannochloropsis gaditana

Overview
NameRad23
Unique Namegene2754
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:135071..137663 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100149g7
Gene biotypeprotein_coding
GeneRad23
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:135071..137663 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006259DNA metabolic process
GO:0006950response to stress
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00120NO09G00120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2877rna2877-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2877rna2877Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2877

>rna2877-protein ID=rna2877-protein|Name=rna2877|organism=Nannochloropsis gaditana|type=polypeptide|length=331bp
MSCIRMFFYFTFKTDGRRRPYNSLTRRMVSIKLKTIQGREFSVDGVELSQ
TINDLKAAVEASPPSGEVLPADRLKLIHQGKELTQGDSTLSAYNIADNDL
VIVMLTRHKPPAPSPSAPAPAPPPPSLPPSQPPSNPHVEQLKEMGFPESQ
VTAALRAAQNDADLAVEFLFSGNIPSSPAPLSALESAVGVERDAERAAEE
EAGAGTNATVVAQLLSHPEMERIRRVVRENPSGMESMVAALAVTHPDLVR
IINEDPASFWAALEENEEGMEEDEGEEEEEAGVLGALELSEADEAAIARL
MEMGFGREQVVEAYILSGKEENAAVNLLLGG
back to top
Synonyms
Publications