Naga_100148g10, gene5536 (gene) Nannochloropsis gaditana

Overview
NameNaga_100148g10
Unique Namegene5536
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:704268..705749 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100148g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:704268..705749 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL020ngnoL020Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02770NO11G02770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5731rna5731-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5731rna5731Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5731

>rna5731-protein ID=rna5731-protein|Name=rna5731|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
MRGGVKCGIVAVGITRGRLRDLCRRNDSTRALLSVHCSLTSPLLHVHRRW
TQHQMFHDGPRDKDRLSENMSKPPEHSGSQSTVPPSDATDADDRGCTEAG
VIRAAVRSSINIYRSILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGS
HKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGT
AVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGG
LAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEV
LKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSS
LRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRVLRCAGEEEG
back to top
Synonyms
Publications