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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100148g10.7145.mrna |
| Orig protein id | gnl|cribi|Naga_100148g10.7145 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:704268..705749 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5731 ID=rna5731|Name=rna5731|organism=Nannochloropsis gaditana|type=mRNA|length=5137bp
CATGCACTCTACCGTCAACCCAGGCTCCAAACAGGGTTGCCGCATGTCAA
GAAGATCGTCGGATGAAGAAGTAATAGATGTAAGTAGATCTCAATTCGTG
GGATCCAAGAATGGAGAGCGTAATCCACAGCTTCTGGTGGTCGCTCCAGG
CCCCGTAAATGATGCGGTTGTCACTCAAGGCGCTCATTCTCCGCCTGACC
GCGTTGGAGTTCACCGTCGCCTTCCACTGCAGGAAACACGGACTAACTCG
ATTCGACTGCACGATTCTTCAATCCAAAACCTGCGCTCGGACGTCTGGGC
TGCCTTCTGTCGCCCGTTTGAGGTAAACGGTGTTGCGGTCGCATCTAAGA
CCCATACGCGACTCTTGCAAATGCCTGTAACAAGCAGTTCGCGAGGTGAC
ACTATTCAAGTCACCAAGTGTTCCGAGCCACAAGAATCACTCAAGCCAAA
GGATTGTGGAGACATACATGAAGAGGGAGCTTTCCGTCGAGAATCCGCTG
TTTCAGATCCCTTGCGAAAAGACAGTTTGCGGACGGACACTACTGCCTCC
AAGTCATCCGTTCAACATGTGCCCTCGGGCAGCCGAAGAAACATACCAAA
CTGCATCACAACCTCTGTCAAATCTAGCCCGCCATTATGTTGGCACTGCA
AACACACCATGGAGGATCGAGGGGTCTGCTCCATCCCACGCTACCGCTGC
CAGTTTTTCCCTCGGTGCCCAGGCCGGTGCGGGACGGACCGTCCCCAAGA
AGCTGTTTTCCTGCAACTCCGCGGCCCGAGCCTGAAAGACCTTTGCCTTT
CCTATCCCGATATGCCAGCAACTGCTGTAGCTTTTGGCGCGAATTGGTTA
TCCGCTCGCTTGAAGTTGTGTGGCCTCAAAGATGCCGTGCTCGATAAAGC
CCGTGGGATCCGTCCCGTACCCCCCGGGCAGAGGGGCGGAGGTGGCGCGT
GGGAGGTAGTTCTGGATGTGAGAGAGTGCGAAAACGTGACCCGACTCCTG
CGGGAGCATCCGACTTTGGACTTGGTGCGCGAGGTACCCTTGCCGACTTT
GCGTTTTGTAAGCCGCCTCCTGGATGGTGAAGCCGCGCGCGAGGAGGGGG
GCTCGGGGTTTTTTGCCACGCCCGGGGAAGTGGAACGTCGCTTCGCGCTT
CTTCCGCGACGGGTCATGAAGGCCCTCTTTGATTTCCAGAAGGAAGGTGT
GCGCTTTGCGCTGCGACGCCAGGGCCGGTGTTTTATAGGGGATGAAATGG
GCACGGGCAAGACCCTGCAGGCGTTGGCGGTCATGGTTTGCTACCAGACG
GAATGGCCCCTCCTCATTGTTGTGCCAGCCTCGCTCCGGTTGCTGTGGGC
GGAGGTGGTGGAGAAATGGGTGCCCTTCCTGCGGCCTGCAGACATCCACG
TCATTTTTAGGGAGGCCGACAGGGTGTCGAGCAGGAGCGAATGCCCGCCG
GTCGTGATCACCTCCTACGAAATGCTTCGGAACCTGGAAGCATCCATGAC
CGCCGTGGCTTTCCATTGCGTCATTTTCGACGAATCCCAAAAGATGGCCA
CCACCCGTGCGCACAGTGCCTTGAACCGGGTGACTTCCGCCGCCCTCCGG
GTCGCCTCGTCGGCCATCCGCGTCCTCCTCCTCTCAGGCACCCCTACCAT
GGCCCGGCCTTTCGAAATCTACGACCAGGTACGTCTTCTTCAGGCGGACC
TTCTGAGCACGCCCCAAGGGTCGCATGATGGTGCGAGCAAGTGGGAATTT
GGTCGAAATTATTGCACGGGAGTATATTGGCAGACCCGTTCTCAGCGCCC
TCCGCTGGCAGCCGCCAAGTACGACGGCACCAGGTGTGATGAAGAGCTGT
ACTGGCTCCTTCGAAATGCAGTGCTGATTCGCCGGCTCAAGAAAGATGTC
ATGGCCGAGCTTCCGTCCTTGGTCCGGACCGTTGTAAGGGTGGAGGAAGG
GAAAGATGGGGCATCTATTTGGTCTCAACAGGTCGATAGCACGGAAACAG
AAGGCAGGATAGAGTGTTCATTTGAGGGGGGGGCGTCTTTAAAGAAAATT
AGAGCTGCATACGATCAAAATTGCGCAGCGGAAACATGTCTCATGGAAAG
AATGGAAGACGAGCAGACTGAGCTGCAGATAACTTGGGGGGATTCAGAGC
ATCGGGACGAGAGGAAAAGATTTGTGGGCCAAAGTGAGTACCATCAGCTC
GGACACCTCAAGTTGGGAGGGGTAAAAGAATGGCTCGCTGATCGTCTTTT
GGGAGGGTGGCTAGATGCGGGGGTGGTAGGGTACGAGGAAGACGCCATTG
TGGAGGCAGACGCCCCCAAATTCGTGATTTTCGCCCACCACTTGGACGTG
CTCGCCGTCCTGCATGGCTTTCTTCACAACATCTTTGTGAGGCATCGTGC
ATGCCGGCGTCTTGCTTTTCATTGGTCGCAAGTACAAATCCAGGGGTCGA
CGCCTCCCGAGACTCGGCAGGACCTGGTAAAACGATTCAAAAACGACAGG
TATTGTCGGATGGCCTTGATTGGTATCACCGCCGGGGGAAGTGGGCTCGA
CCTGGCTGCGGCGTCTACGGCCGTCTTTGTCGAACTGCCCAATTCTCCCC
ACTGGCTCAGACAGGCAGAGGACCGCTTGCACCGTCGCGGGCAACGGCGT
AGAGTGCAGATTTACTATTTGGTCTTGCCTCCCGGGAGCGCAGAAGATAA
GGTCTGGCAATGCATGCGACGACTCTTACGCGAGAATACGGCCGTGATCA
ATTCCCGGGAGGAGGCGGAGGAGCTGGACGTCAACCGCGTCGAGGAGTTC
AGGGCACAAGCATCGCTTCCACAGGACGCACCGAGCCAGGCGGCTGAACT
CTTGGAGGGCGGCTTATTCCCATTGCTGAGTAAAGGGGAGGAGAGGGAGA
ATTTTTGGCCTGGAAATGGTCTCTCTGAGTCGCCTCCAGAGTTTGTAAGG
GAAGCATCGGAGCCAGAAGGTGGAAAAGAACACCTGAGGGGGGAATCTGA
ACGTCAAGCGGACCGCGTGCATGATCCTTCATTTCCGGACACTTGTCTCC
TGTCCGAGACAAACGCACATAGTGCGAACATTTCCAGTCCCTCGTCAAAA
CCAGCTGTAGCATCGGTGAGGAAAGCATGCAATGCTGTGGAGGATGCTGC
CCAAACCAACGGGGTCAATCGCACACAGGAAATGTCCCCGCCAGCTGTCC
TTGCTTCGGGTGTGCCCGTCATCAACCACTTTCTCCATGGACGCTTTGGT
GGCGAGGACTACGAGTGGGAGCTCGAGGCTCTGGCTGGTTTGACGCAAGA
GGACGCGGACGAGGAGCAGACGGTGCAGGCAGCGGATGGAGAGGGACAGG
TCTTGCAGCAGAGAAGCGACGGGCTTCCCAATGACATTAAAGTAAATGCT
GATTTCAGTAGTTACGAAAGGTGTAGCGCAAAAACTGGAACGACTACGGA
GGGAAATCACACGGGGAATGTAGCCGAGGATACAGTGCGATGCAGCTATG
AGTGTGCAGATTCTCCAGTCCATTTGAGCCCATCTTCGCAGTGGTGCCAT
CCCTCACCAGACAAGAATACCCGCACAGACAAGGACATCACTAGAGCAAC
GTGCGCTCTCAAGGGCAATGTGGGATGTGGTCAGAAGCCCGCTGTCAAGC
TCCTCTACAACCTGTGGTTCGAAGTCAGCAAGCATACTGGATGGGTGCAT
TTACACGAGCACGAGGACGGGAGTAAGCCCCTCGGTGTGCACGTGGACCC
CCTTGACTACTACCACTTGACCGGCTTGGCTCAGAATGCTCTTTCCTCCC
TTCCTTTGCTCGAGGAGATCCGCGCGCGTGCCGCAGATGAGATTATTCTT
GAGGATCTTCCTCCATTTATCCAGGTCGCTCCAGGGGAAAAATGGCAATT
GCTCAAATTCATGACCCAGTTCCAAAAGGAATGTGCGCGAATTCGCAACC
AATTGTACGGCTATGTGTTACAACCTATGGAAGGTGGACTTCAAGGATGG
ATTCGAAAGCACCGAACCAACAGGCAAAGGGCAGGTCGGCAGAAAGCATC
TCTGCCTCCTCGAGTCCTTTCTTCCTGGGACCCGGATTTTGGGTACAGAC
GACACTTGACCTACGAGGAACTCTTTGATCCCTCCCGGCATAGCAACGTG
ACACGGCATGTTCTCGTGACATCTGGACGGCTCTTCCGGCGTAGCTTCCG
ACAGCCACTCGATCCTCAAACCCATGACCCCCTGTGTTTCTGTTGTGGCA
CGGCTTTTTCCCTGCCCGGTGGGACACGCACATTGCAGGATTTGTTGTGT
TCAGCCGCTTGTCTCGCCTATTTCGCGTGTCTGTCACGGGGGGGCTTGCG
GCGTGAAGTTGGACGACGGGACCGAGGAATCTGTGAAATGTGTGGGCTGG
ACACGTTGGGCTTGCTTGAACGGGTCAAACACTCGTCATGCCTGAAGTCC
CGGGAAATGTTGGTGGTCGAGGAAGTGCCAAAATTCAAAGAGCGCCCGAA
GCTGTTGGCCAGGCTGGTCCGCGAACCCAAAGAGGGACATGTGTGGCAGG
CAGACCACATCCACATGGTGGCAGAGGGGGGGGGTCTCTGTGATACCACC
AATGGTCGCGCCCTTTGTGTGCTGTGCCACGCAAGCGTGACTGCCGAGCA
GAGTCGTTTGGGTCGTGGAGATAAACGGCGTGCAGGACGGGAAAAAGTGA
AGAAGGAGAGAGGCGCAGGGATGCACGTAGAAAGGGGGGAATGGGGCACA
ACGACTGGACAAGGTGACGCGGAAGGTGGAGCGCGAGGTAGGGTGGTGCA
GGATTATACAGGAATGAAGATGAGAGGGCGGAGGGACACTGAACAGGCAT
GTTTGAATGGGCGGACGGATCCAATGGAGGGCGAGGACGGGGACAATCGG
GGCGAGGAGGACATTCGAGGCGAAGCGTCCGGCTTGAAAAAATGTCAGCA
GATTGCAGAGGATTACGAACGCGATGAAAACCAGAGGTTGAAAGTAAAAG
CAGAGCCTATTGAAGACCATCAATTGATTGCGATGTGTCCTTGATCACGG
TTAGATGTATGACAGTTGAATACAGCATGTGTACAGAAGTGTGAAGATAA
AGTGCTCAGAAAGAGGGGACGAAGGAGATGCTCAGCG back to topprotein sequence of rna5731 >rna5731-protein ID=rna5731-protein|Name=rna5731|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
MRGGVKCGIVAVGITRGRLRDLCRRNDSTRALLSVHCSLTSPLLHVHRRW
TQHQMFHDGPRDKDRLSENMSKPPEHSGSQSTVPPSDATDADDRGCTEAG
VIRAAVRSSINIYRSILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGS
HKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGT
AVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGG
LAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEV
LKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSS
LRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRVLRCAGEEEG back to topmRNA from alignment at CM002466.1:704268..705749- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5731 ID=rna5731|Name=rna5731|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp|location=Sequence derived from alignment at CM002466.1:704268..705749- (Nannochloropsis gaditana)
CGCTACCGCTGCCAGAAGAAACGGAGTATTTCCACGTAGTAGAGACAATA
CCGCGTAAAAATTATGCGAGGAGGGGTAAAGTGTGGCATTGTGGCGGTTG
GGATAACTCGCGGAAGGCTGCGGGATCTGTGTCGACGCAATGACTCCACG
CGAGCGTTGCTTTCTGTTCACTGCTCTCTGACCTCCCCTCTGTTGCACGT
CCACAGGCGATGGACACAACACCAGATGTTCCATGACGGCCCCAGAGATA
AGGATAGGCTATCTGAAAACATGTCTAAACCTCCGGAGCACAGCGGGTCG
CAGTCCACGGTGCCGCCCAGTGATGCGACGGATGCGGATGACAGAGGGTG
TACGGAAGCAGGAGTGATACGGGCAGCCGTCCGAAGTAGTATCAATATTT
ACCGCAGCATTTTGTTCGGAAGCTTTCCCCGCAGAGTCCCTCTTAAAACT
GTATCCAAGATCACCGATCAGGTTTCTACAGCTTGGGACGCCTATTCTGT
CTTCAAAGGCTCGCACAAAGAGGCGACTCGAGACATCGAAGTGCAAAACC
GGCCGCAGCACAAGGAAAGTCTCGGGACCGCGGGTTTGCACAAAGCTCAA
TTATTTGGACAAACGCTACGAAGCGCTGTACCACACATGGTCAAAAGCGG
TTTTTTGGGGACGGCTGTTTTTGAAATGTACGAAACGAGCAAAGACACGC
TGGATAACGCATTGGGGTTGGACAAGGATGTGGACGGAGAGGCGTCGTTC
AGTACATCGCGCGACGTGTTCTCCCTCTCAATGATGGGAATCACAGGACT
AATCAGCGGCGGTCTCGCAGGCACATGCCACGGGCTATTATACGTTGGGT
GGGAGCATGCTCGACGCCTGATCAATGCGCAACACGTTGTTGCTAACGTG
TGGACGGGAACGGCCCTGGCTCACTCTTTGGCTCATGCATCCTTGTTCGG
TTCTTTTGAAGTTCTTAAGGATGCTTTGCTGGCAATTACGCACGCACGGC
ATGAGGAACCTTTGGGCGTGTTCGTCGTTGGGGCGGCGGGGGGGCTTGCA
GGCCTGGTTGAGGAGACGGTGTCGCATTTGACTCCCCACTGGGAGAAAGA
AGGCGTCTCAAGTTTGCGGGCAGCTTTCAAACGTAACGGCTTGCCACGAC
TTCGTGTCATCTCGTCGGCGGCCCTTCCGACAAGTCTAGGCTTCTTAGCG
TGGGAGTACGGACGACATCGGGTGTTGAGATGTGCAGGAGAAGAAGAGGG
GTAGCTCTGCCCGTGTGTATAGCCGACGATATTCACCAACCAAGAATGTC
ATACATGTGATGCTCACATAACAAAGCAAGAACGTAAGTACTTCAAGAGA
TTCGCTGAGCATCTCCTTCGTCCCCTCTTTCTGAGCACTTTATCTTCACA
CTTCTGTACACATGCTGTATTCAACTGTCATACATCTAACCGTGATCAAG
GACACATCGCAATCAATTGATGGTCTTCAATA back to topCoding sequence (CDS) from alignment at CM002466.1:704268..705749- >rna5731 ID=rna5731|Name=rna5731|organism=Nannochloropsis gaditana|type=CDS|length=1191bp|location=Sequence derived from alignment at CM002466.1:704268..705749- (Nannochloropsis gaditana)
ATGCGAGGAGGGGTAAAGTGTGGCATTGTGGCGGTTGGGATAACTCGCGG
AAGGCTGCGGGATCTGTGTCGACGCAATGACTCCACGCGAGCGTTGCTTT
CTGTTCACTGCTCTCTGACCTCCCCTCTGTTGCACGTCCACAGGCGATGG
ACACAACACCAGATGTTCCATGACGGCCCCAGAGATAAGGATAGGCTATC
TGAAAACATGTCTAAACCTCCGGAGCACAGCGGGTCGCAGTCCACGGTGC
CGCCCAGTGATGCGACGGATGCGGATGACAGAGGGTGTACGGAAGCAGGA
GTGATACGGGCAGCCGTCCGAAGTAGTATCAATATTTACCGCAGCATTTT
GTTCGGAAGCTTTCCCCGCAGAGTCCCTCTTAAAACTGTATCCAAGATCA
CCGATCAGGTTTCTACAGCTTGGGACGCCTATTCTGTCTTCAAAGGCTCG
CACAAAGAGGCGACTCGAGACATCGAAGTGCAAAACCGGCCGCAGCACAA
GGAAAGTCTCGGGACCGCGGGTTTGCACAAAGCTCAATTATTTGGACAAA
CGCTACGAAGCGCTGTACCACACATGGTCAAAAGCGGTTTTTTGGGGACG
GCTGTTTTTGAAATGTACGAAACGAGCAAAGACACGCTGGATAACGCATT
GGGGTTGGACAAGGATGTGGACGGAGAGGCGTCGTTCAGTACATCGCGCG
ACGTGTTCTCCCTCTCAATGATGGGAATCACAGGACTAATCAGCGGCGGT
CTCGCAGGCACATGCCACGGGCTATTATACGTTGGGTGGGAGCATGCTCG
ACGCCTGATCAATGCGCAACACGTTGTTGCTAACGTGTGGACGGGAACGG
CCCTGGCTCACTCTTTGGCTCATGCATCCTTGTTCGGTTCTTTTGAAGTT
CTTAAGGATGCTTTGCTGGCAATTACGCACGCACGGCATGAGGAACCTTT
GGGCGTGTTCGTCGTTGGGGCGGCGGGGGGGCTTGCAGGCCTGGTTGAGG
AGACGGTGTCGCATTTGACTCCCCACTGGGAGAAAGAAGGCGTCTCAAGT
TTGCGGGCAGCTTTCAAACGTAACGGCTTGCCACGACTTCGTGTCATCTC
GTCGGCGGCCCTTCCGACAAGTCTAGGCTTCTTAGCGTGGGAGTACGGAC
GACATCGGGTGTTGAGATGTGCAGGAGAAGAAGAGGGGTAG back to top
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