Naga_100021g5, gene4669 (gene) Nannochloropsis gaditana

Overview
NameNaga_100021g5
Unique Namegene4669
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:469540..471896 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100021g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:469540..471896 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01880NO12G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4835rna4835-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4835rna4835Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4835

>rna4835-protein ID=rna4835-protein|Name=rna4835|organism=Nannochloropsis gaditana|type=polypeptide|length=632bp
MKSDKQAIGCYETNESPAGCEVLQLLRLSRFLLNEQAEGKGSKCKTCSCR
CVASNRARSRSHLQKELEKVLQCLSFEVIMYLILLLFVMAVPGAHAFSGP
TPSRSSTLGSHHHPRSVALESTIAGWMSVAGYDQGYGDNRENDRDERASL
YALVMDELAHRRGLSVSGVRQVIRKTKPQDLAARWRGWRRSCDCLLSLGF
SAQNVTSILQGSSAFLHELDPEADIRRVVFYLWEDLGFNSWGKIGLGLGS
WQRHKYKVVTTAPEVLRRKPEGGVEETVATLEQVGMPTKYILDASFRFPS
LLNVPPSLIFCVSAYLSSTDVGFRPRDLGALYRRNPWLLHPRTVEQLRPV
VAFLREELQVQRMHVVLRGYPQVVLKSVNADLQPRVVLLQSLGIPSQQIG
CMVEAFPLLLSLPLEEQMLPVLFFFQAELGFSRHELWTMLRSFPAVLDLS
IEENIRPVVSFLRDDVGLPDVKEFIKRLPPVLGYPVDWELRKKWALFQEL
GLDASDFAGFPGFVSYSLHDRLIPRLDFCRRQGVLAQDVVALRVVMAGGD
AAFAKEFIGVDPEAYEEFLLDYKVRRKEARAAQTRADRESARSTRSWSER
KKGEKKWGRMKDEVSSMEEDDDSFLFSEAVCD
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Synonyms
Publications