NSK005360, NSK005360 (gene) Nannochloropsis salina

Name	NSK005360
Unique Name	NSK005360
Type	gene
Organism	Nannochloropsis salina (N. salina CCMP1776)
Alignment location	scaffold3:207096..209873 +

Link to JBrowse

Analysis: RNA_seq analysis for N. salina CCMP1776 v2 under N starvation RNA-seq profiling for N. salina CCMP1776 under high salt and nitrogen limitation

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top

Aligned Feature	Feature Type	Alignment Location
scaffold3	supercontig	scaffold3:207096..209873 +

Analysis Name	Date Performed
RNA-seq profiling for N. salina CCMP1776 under high salt and nitrogen limitation	2019-10-29
RNA_seq analysis for N. salina CCMP1776 v2 under N starvation	2019-10-10
GO annotation for N. salina CCMP1776 v2	2019-10-09
Gene prediction for N. salina CCMP1776 (version 2)	2019-10-08

Vocabulary: Biological Process

Term	Definition
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
GO:0090305	nucleic acid phosphodiester bond hydrolysis
GO:0042752	regulation of circadian rhythm
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening

Vocabulary: Molecular Function

Term	Definition
GO:0046872	metal ion binding
GO:0043621	protein self-association
GO:0016787	hydrolase activity
GO:0004535	poly(A)-specific ribonuclease activity
GO:0004532	exoribonuclease activity
GO:0004527	exonuclease activity
GO:0004518	nuclease activity
GO:0003723	RNA binding

Vocabulary: Cellular Component

Term	Definition
GO:0005737	cytoplasm
GO:0005634	nucleus

This gene is member of the following syntenic_region feature(s):

Feature Name	Unique Name	Species	Type
nonsR069	nonsR069	Nannochloropsis salina (N. salina CCMP1776)	syntenic_region

The following gene feature(s) are orthologous to this gene:

Feature Name	Unique Name	Species	Type
NO03G05170	NO03G05170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following mRNA feature(s) are a part of this gene:

Feature Name	Unique Name	Species	Type
NSK005360t	NSK005360t	Nannochloropsis salina (N. salina CCMP1776)	mRNA