NO27G00910, NO27G00910 (gene) Nannochloropsis oceanica

Overview
NameNO27G00910
Unique NameNO27G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2356
Alignment locationchr27:308167..310522 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlyceraldehyde-3-phosphate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:308167..310522 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR020829GlycerAld_3-P_DH_cat
IPR020828GlycerAld_3-P_DH_NAD(P)-bd
IPR020831GlycerAld/Erythrose_P_DH
Homology
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: XP_002286205.1 (glyceraldehyde-3-phosphate dehydrogenase precursor, partial [Thalassiosira pseudonana CCMP1335] >EED95846.1 glyceraldehyde-3-phosphate dehydrogenase precursor, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 473.0 bits (1216), Expect = 8.600e-130
Identity = 238/368 (64.67%), Postives = 289/368 (78.53%), Query Frame = 0 
Query:    9 IGALALAGSVSAFVTPSFKLNAVQ-HARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            I AL+L    SA+   +F  ++++  +  + + MA  +G+NGFGRIGRLV RI ++D    L AIN G A  +YMAYQ+KYD++HG   G VD++GD ++++G+++ T+  R P+E+GWG LGA Y+CESTG FLTKE  Q  IDGGAKKV+ SAPAKDDSQ IVMGVN+ +Y G+ + +SCASCTTNGLAP+VK I+DEF I+EALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAVTKVIPSL+GKLTGMAFRVP  DVSVVDLT +L K TTYE ICA +K  SE   KG++GY + P+VS DF SDSRS+IFDAGAGI LNP FVKLVAWYDNEWGYS RVVDL+K VA  D
Sbjct:    3 IAALSLVAGASAYAPSAFSGSSLRATSNGSSMSMATGMGVNGFGRIGRLVTRIMMEDDDIKLSAINAGSATPDYMAYQYKYDTIHGIAKGTVDIDGDFLVLNGEKIQTSRCRDPKEVGWGALGADYVCESTGVFLTKEKAQAIIDGGAKKVIYSAPAKDDSQTIVMGVNQGEYDGSEDFISCASCTTNGLAPMVKAIHDEFDIQEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVTKVIPSLQGKLTGMAFRVPTIDVSVVDLTCKLGKATTYEEICAVIKAKSEGEMKGILGYCDEPLVSTDFESDSRSSIFDAGAGIMLNPTFVKLVAWYDNEWGYSGRVVDLMKHVAAVD 370
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: AAC49703.1 (glyceraldehyde-3-phosphate dehydrogenase precursor [Pyrenomonas salina])

HSP 1 Score: 469.9 bits (1208), Expect = 7.300e-129
Identity = 242/381 (63.52%), Postives = 284/381 (74.54%), Query Frame = 0 
Query:    5 QSTLIGALALAGSVSAFVTPSFKLNAV--QHARANDVHMAVPI--------GINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVG-ANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            ++ L+G L++A   +AF   S  +  +  Q   A    M  P+        GINGFGRIGRLVARI +KDP+ NL+ +N G A  +YMAYQFKYDS+HGRFDG V V+G+ ++IDGQRV+TT  R P++IGW K G  YLCESTG FLT E  Q HIDGG KKV+ SAPAKDDS  +VMGVN +DY G  + +SCASCTTNGLAP+VK IND+FGIEE LMTT+HA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAV KVIP +KGKLTGMAFRVP  DVSVVDLT +L K TTYE IC  VKK +    KGV+GY + P+VS DF S+S S+ FDA AGI LNP FVKLVAWYDNEWGYS RV DL+  +AK D
Sbjct:    3 KTVLVGVLSVAAGANAFQMGSSFVPRMGGQAETARRATMTGPVMAEDPVKCGINGFGRIGRLVARIMIKDPETNLIHVNAGSATPDYMAYQFKYDSIHGRFDGAVVVDGEDLVIDGQRVITTRQRDPKDIGWDKTGVEYLCESTGVFLTSEKAQAHIDGGCKKVIFSAPAKDDSLTVVMGVNPDDYKGQTDFVSCASCTTNGLAPLVKCINDKFGIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVAKVIPDVKGKLTGMAFRVPTIDVSVVDLTCKLKKETTYEEICNEVKKRAAGDMKGVLGYCDEPLVSTDFESESISSTFDAEAGIMLNPSFVKLVAWYDNEWGYSTRVKDLMVHMAKVD 383
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: AAF34326.1 (glyceraldehyde-3-phosphate dehydrogenase precursor [Trieres chinensis])

HSP 1 Score: 466.5 bits (1199), Expect = 8.000e-128
Identity = 234/366 (63.93%), Postives = 286/366 (78.14%), Query Frame = 0 
Query:   11 ALALAGSVSAFVTPSFKLNAVQ-HARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            A  L GS +A+   SF   +++  +    + M+  +G+NGFGRIGRLV RI ++D  C+L AIN G A  +YMAYQ+KYD++HG   G V+++GD ++++G+++ T+  R P+E+GWG LGA Y+CESTG FLTKE  Q  IDGGAKKV+ SAPAKDDSQ IVMGVN+ +Y G+ + +SCASCTTNGLAP+VK I+DEF IEEALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAVTKVIPSL+GKLTGMAFRVP  DVSVVDLT RL K TTYE ICA VK  +E   KG +GY++ P+VS D+  ++ S+IFDA AGI LNP FVKLVAWYDNEWGYSCRVVDL+K VA  D
Sbjct:    6 AALLVGSAAAYAPSSFSGTSLKASSNGASMSMSTGMGVNGFGRIGRLVTRIMMEDEDCSLNAINAGSATPDYMAYQYKYDTIHGIAKGSVEIDGDFLVLNGKKIQTSRCRDPKEVGWGALGADYVCESTGVFLTKEKAQAIIDGGAKKVIYSAPAKDDSQTIVMGVNQAEYDGSEDFISCASCTTNGLAPMVKAIHDEFVIEEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVTKVIPSLQGKLTGMAFRVPTIDVSVVDLTCRLEKATTYEEICAYVKSKAEGDMKGFLGYSDEPLVSTDYEGNTISSIFDADAGIMLNPNFVKLVAWYDNEWGYSCRVVDLMKHVAAVD 371
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: XP_005840507.1 (GAPDH, chloroplast-targeted [Guillardia theta CCMP2712] >EKX53527.1 GAPDH, chloroplast-targeted [Guillardia theta CCMP2712])

HSP 1 Score: 466.1 bits (1198), Expect = 1.100e-127
Identity = 230/333 (69.07%), Postives = 265/333 (79.58%), Query Frame = 0 
Query:   43 VPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVG-ANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            V  GINGFGRIGRLVARI ++DP+C L+ IN G A  +YMAYQFKYDS+HGRF GKV V+GD ++I+ QR++TT  R P++IGW K G  YLCESTG FLT E  Q HID G KKVV SAPAKDDS  +VMGVN +DY G  + +SCASCTTNGLAP+VK IND++GIEE LMTT+HA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAV KVIP +KGKLTGMAFRVP  DVSVVDLT RL    TYE ICA VK+ +    KG +GY + P+VS DFVS+  S+IFDA AGI LNP+FVKLVAWYDNEWGYSCRV DL+K +AK D
Sbjct:   68 VNCGINGFGRIGRLVARIMIEDPECKLLHINAGSATPDYMAYQFKYDSIHGRFKGKVVVDGDDLVINDQRIVTTRARDPKDIGWSKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVVFSAPAKDDSLTVVMGVNPDDYKGQTDFVSCASCTTNGLAPLVKCINDKWGIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVAKVIPDVKGKLTGMAFRVPTIDVSVVDLTCRLKTDATYEEICAEVKRRANGDMKGFLGYCDEPLVSTDFVSEPTSSIFDAEAGIMLNPRFVKLVAWYDNEWGYSCRVKDLMKHMAKVD 400
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: OEU05954.1 (glyceraldehyde-3-phosphate dehydrogenase precursor [Fragilariopsis cylindrus CCMP1102] >OEU09937.1 glyceraldehyde-3-phosphate dehydrogenase precursor [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 466.1 bits (1198), Expect = 1.100e-127
Identity = 237/366 (64.75%), Postives = 285/366 (77.87%), Query Frame = 0 
Query:   12 LALAGSVSAFVTPSFKLNAVQHARAND--VHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            LA  G  +AF   SF       A +ND  + MA  +G+NGFGRIGRLV RI ++D  C L AIN G A  +YMAYQ+KYD++HG+    V+V+GD +++DG++V+T+  R P+E+GWG LGA Y+CESTG FLTKE+ Q  +DGGAKKV+ SAPAKDDSQ IVMGVN+++Y G+ N +SCASCTTNGLAP+VK I+DEF IEEALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAA AVTKVIP LKGK+TGMAFRVP  DVSVVDLT +L K TTYE ICA +K  SE + KG +GY + P+VS DF  D+RS+IFDA AGI LNP FVKL+AWYDNE+GYS RVVDL+K VA  D
Sbjct:    9 LASVGYTNAFSGTSFS-GTTLRAASNDATMLMATGMGVNGFGRIGRLVTRIMMEDDACELKAINAGSATPDYMAYQYKYDTIHGKAGHTVEVDGDFLVLDGKKVLTSRCRDPKEVGWGGLGADYVCESTGVFLTKESAQAILDGGAKKVIYSAPAKDDSQTIVMGVNQDEYDGSENFISCASCTTNGLAPMVKAIHDEFVIEEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAVAVTKVIPDLKGKITGMAFRVPTIDVSVVDLTCKLKKATTYEEICAHIKANSEGSQKGFLGYCDEPLVSTDFEGDTRSSIFDANAGIMLNPNFVKLIAWYDNEYGYSARVVDLMKHVATID 373
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: GAX15346.1 (hypothetical protein FisN_8Lu366 [Fistulifera solaris])

HSP 1 Score: 466.1 bits (1198), Expect = 1.100e-127
Identity = 239/371 (64.42%), Postives = 285/371 (76.82%), Query Frame = 0 
Query:    7 TLIGALALAGSVSAFVTPSFKLNAVQHARAND--VHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            T    +A  GS +AF   SF   ++     ND  + MA  +G+NGFGRIGRLV RI ++D    L  IN G A  +YMAYQ+KYD++HG+    V+++GD +I+DG+++ T+  R P+E+GWG LGA Y+CESTG FLTKE  Q  IDGGAKKV+ SAPAKDDSQ IVMGVN+ DY G+ + +SCASCTTNGLAP+VK INDEFGI+EALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAVTKVIP LKGKLTGMAFRVP  DVSVVDLTARLSK TTYE ICA +K  +E   K  +GY++ P+VS DF  D RS+IFDA AGI LNP+FVKL+AWYDNE+GYS RVVDL+K VA  D
Sbjct:    4 TAAAIVATIGSAAAFTGSSFAGTSLSQGVRNDSSLKMANGMGVNGFGRIGRLVTRIMMEDKDIALNGINAGSATPDYMAYQYKYDTIHGKAKQTVEIDGDFLILDGKKIQTSRCRDPKEVGWGALGADYVCESTGVFLTKEKAQAIIDGGAKKVIYSAPAKDDSQTIVMGVNQGDYDGSEDFISCASCTTNGLAPMVKAINDEFGIDEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVTKVIPELKGKLTGMAFRVPTIDVSVVDLTARLSKETTYEEICAHIKSKAEGDMKPFLGYSDEPLVSTDFEGDIRSSIFDAEAGIMLNPRFVKLIAWYDNEYGYSARVVDLMKHVAMVD 374
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: O09452.1 (RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic; AltName: Full=NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase; Flags: Precursor >AAC49702.1 glyceraldehyde-3-phosphate dehydrogenase precursor [Guillardia theta])

HSP 1 Score: 465.7 bits (1197), Expect = 1.400e-127
Identity = 230/334 (68.86%), Postives = 267/334 (79.94%), Query Frame = 0 
Query:   42 AVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVG-ANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            AVP GINGFGRIGRLVARI +KDP+  L+ +N G A  +YMAYQFKYDS+HGR+ G V V+GD ++IDGQRV+TT  R P++IGW K G  YLCESTG FLT E  Q HID G KKV+ SAPAKDDS  +VMGVN EDY G  + +SCASCTTNGLAP+VK IND++GIEE LMTT+HA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAV KVIP++KGKLTGMAFRVP  DVSVVDLT RL+K  TYE ICA VK+ +    KG +GYT+ P+VS DF ++  S+ FDA AGI+LNP+FVKLVAWYDNEWGYS RV DL+  VAK D
Sbjct:   48 AVPCGINGFGRIGRLVARIMIKDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQGDVVVDGDDLVIDGQRVITTRARDPKDIGWAKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVIFSAPAKDDSLTVVMGVNAEDYKGQTDFISCASCTTNGLAPLVKCINDKWGIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVAKVIPAVKGKLTGMAFRVPTIDVSVVDLTCRLAKDATYEEICAEVKRRANGDMKGFLGYTDEPLVSTDFETEPISSTFDAEAGISLNPRFVKLVAWYDNEWGYSNRVKDLMVHVAKVD 381
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: XP_002182291.1 (glyceraldehyde-3-phosphate dehydrogenase precursor [Phaeodactylum tricornutum CCAP 1055/1] >AAF34329.1 glyceraldehyde-3-phosphate dehydrogenase precursor [Phaeodactylum tricornutum] >EEC46192.1 glyceraldehyde-3-phosphate dehydrogenase precursor [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 459.1 bits (1180), Expect = 1.300e-125
Identity = 227/335 (67.76%), Postives = 273/335 (81.49%), Query Frame = 0 
Query:   41 MAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            MA  +G+NGFGRIGRLV RI ++D +C+LV IN G A  +YMAYQ+KYD++HG+    V+++GD +++DG++++T+  R P+E+GWG LGA Y+CESTG FLTKE+ Q  IDGGAKKV+ SAPAKDDS  IVMGVN+E Y G+ + +SCASCTTNGLAP+VK I+DEF IEEALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAVTKVIPSL GK+TGMAFRVP  DVSVVDLTA+L K TTYE ICA +K  SE   KG +GY++ P+VS DF  D RS+IFDA AGI LNP FVKL+AWYDNE+GYS RVVDL+K VA  D
Sbjct:   40 MATGMGVNGFGRIGRLVTRIMMEDDECDLVGINAGSATPDYMAYQYKYDTIHGKAKQTVEIDGDFLVLDGKKIITSRCRDPKEVGWGALGADYVCESTGVFLTKESAQSIIDGGAKKVIYSAPAKDDSLTIVMGVNQEAYDGSEDFISCASCTTNGLAPMVKAIHDEFVIEEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVTKVIPSLVGKITGMAFRVPTIDVSVVDLTAKLEKSTTYEEICAVIKAKSEGEMKGFLGYSDEPLVSTDFEGDLRSSIFDADAGIMLNPNFVKLIAWYDNEYGYSGRVVDLMKHVAAVD 374
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: BAH28789.1 (glyceraldehyde-3-phosphate dehydrogenase, partial [Olisthodiscus luteus])

HSP 1 Score: 456.1 bits (1172), Expect = 1.100e-124
Identity = 224/299 (74.92%), Postives = 252/299 (84.28%), Query Frame = 0 
Query:   52 RIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVA 351
            RIGRLVAR  +K+P+ +L+ INTGA AEYMAYQFKYDSVHG+F G V+V+GD +I+DGQ+V TTHTR P EIGW K G  YLCESTGAFLT+E CQ HIDGG KKVV SAPAKDD++ IVMGVN+++Y G N +SCASCTTNGLAP+VK +ND FGIEEALMTTVHA TATQMVVDGSSKKDWRGGR+A  NIIPSSTGAAKAVTKVIP L+GKLTGMAFRVP  DVSVVDLT RLSK TTYE IC  +KK SE   KG +GY+++P+VS DF  DSRS IFDAGAGI LNP FVKLVA
Sbjct:    1 RIGRLVARSMIKNPETDLLCINTGASAEYMAYQFKYDSVHGQFKGTVEVDGDVLILDGQKVDTTHTRVPAEIGWNKFGVEYLCESTGAFLTEEKCQAHIDGGVKKVVYSAPAKDDTKTIVMGVNQDEYDGQNFVSCASCTTNGLAPMVKAVNDAFGIEEALMTTVHAATATQMVVDGSSKKDWRGGRAAFANIIPSSTGAAKAVTKVIPELQGKLTGMAFRVPTCDVSVVDLTCRLSKSTTYEEICDEIKKRSEGDMKGFLGYSDIPLVSTDFEGDSRSCIFDAGAGIMLNPNFVKLVA 299
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: OEU12676.1 (glyceraldehyde-3-phosphate dehydrogenase precursor [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 449.9 bits (1156), Expect = 7.800e-123
Identity = 222/325 (68.31%), Postives = 264/325 (81.23%), Query Frame = 0 
Query:   51 GRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            GRIGRLV RI ++D  C L AIN G A  +YMAYQ+KYD++HG+    V+V+GD +++DG++V+T+  R P+E+GWG LGA Y+CESTG FLTKE+ Q  +DGGAKKV+ SAPAKDDSQ IVMGVN+++Y G+ N +SCASCTTNGLAP+VK I+DEF IEEALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAA AVTKVIP LKGK+TGMAFRVP  DVSVVDLT RL K TTYE ICA +K  SE + KG +GY + P+VS DF  D+RS+IFDA AGI LNP FVKL+AWYDNE+GYS RVVDL+K VA  D
Sbjct:   49 GRIGRLVTRIMMEDDACELKAINAGSATPDYMAYQYKYDTIHGKAGHTVEVDGDFLVLDGKKVLTSRCRDPKEVGWGGLGADYVCESTGVFLTKESAQAILDGGAKKVIYSAPAKDDSQTIVMGVNQDEYDGSENFISCASCTTNGLAPMVKAIHDEFEIEEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAVAVTKVIPDLKGKITGMAFRVPTIDVSVVDLTCRLKKATTYEEICAHIKANSEGSQKGFLGYCDEPLVSTDFEGDTRSSIFDANAGIMLNPNFVKLIAWYDNEYGYSARVVDLMKHVATID 373
The following BLAST results are available for this feature:
BLAST of NO27G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002286205.18.600e-13064.67glyceraldehyde-3-phosphate dehydrogenase precursor... [more]
AAC49703.17.300e-12963.52glyceraldehyde-3-phosphate dehydrogenase precursor... [more]
AAF34326.18.000e-12863.93glyceraldehyde-3-phosphate dehydrogenase precursor... [more]
XP_005840507.11.100e-12769.07GAPDH, chloroplast-targeted [Guillardia theta CCMP... [more]
OEU05954.11.100e-12764.75glyceraldehyde-3-phosphate dehydrogenase precursor... [more]
GAX15346.11.100e-12764.42hypothetical protein FisN_8Lu366 [Fistulifera sola... [more]
O09452.11.400e-12768.86RecName: Full=Glyceraldehyde-3-phosphate dehydroge... [more]
XP_002182291.11.300e-12567.76glyceraldehyde-3-phosphate dehydrogenase precursor... [more]
BAH28789.11.100e-12474.92glyceraldehyde-3-phosphate dehydrogenase, partial ... [more]
OEU12676.17.800e-12368.31glyceraldehyde-3-phosphate dehydrogenase precursor... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005099NSK005099Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00910.1NO27G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
GapC1gene9420Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00910.1NO27G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00910 ID=NO27G00910|Name=NO27G00910|organism=Nannochloropsis oceanica|type=gene|length=2356bp
TCGCCCTGACTCGGCCAGATCTTGTGTGGCATGCGTGTACTCCCTCATTG
CCTTGGGAGACGTTTGCTTTACATATTTTTAACTTCTAGGCAACAAAAAG
TGACCTCCTCCCTAACACGGCAAACGAGTAGTACCGAGATTCTGGCTCGC
AGCGGATCTTGCAGCCGCAGACTGCAACTTTTTGCCTCTGTTCTTGGTCC
CTGTCTTGTGGCGTGCTTCTTAAAAATAGCCCTGGCTCGTCTCACCTTGT
TGTGCTGCGTGGTCCATCCTTAGCCTAGCACGACCGCACATCTACCTCGC
ACGCCACCCATAACCTACCACAGGCGGTGTTCAAGCCCGTGGCTGCATGC
GTCGTCCCTTCCGCTACCACCCCCGAGCTTGCACACGATGGCGGCTCGCT
CGTGAGTGGCTGGTGCAAGGCGAAAGCAACCACAATATTCTGGCCTTTGC
CATTTTATATTGCCTGGCCTTGACCTTGTAAGCAGCGTCCCCACAGCTTC
CTCCACCAGCACACTGTGTCCCGCATGTGTGGATTGGGGCAGTGGGCAGT
CTTTCTTGTTGTCTTGCACGCCCGCTGGAGGTCAAGTTGGATCAGTATTT
GTACATGCACGGAAGAGAGCGTGACGAGGCGGAGACAAACCGCTCCAAGC
CATCTTCCCATACCAAGCAAACACAACACGTACTCACCCTCCACTCTCCT
TGTCCTTTTTCCCTCTGACACGCGCACCTACAGCACCCCTCGACGACCCT
CACCTGTCTAAATGGCTCCCGTGCAATCCACCCTCATCGGTGCCTTGGCC
CTGGCCGGCTCCGTCTCTGCCTTTGTGACCCCTTCCTTTAAGCTGAACGC
CGTCCAGCACGCGCGTGCCAACGACGTGCACATGGCCGTGCCCATCGGGA
TCAACGGCTTCGGCCGCATCGGTCGCCTTGTTGCCCGTATCGCCGTCAAG
GACCCCCAGTGCAACCTCGTCGCTATCAACACCGGTGCTGATGCCGAGTA
CATGGCGTACCAGTTCAAATACGACTCTGTGCACGGCCGTTTCGACGGCA
AGGTAGACGTGGAGGGTGACACCATCATCATCGACGGCCAGCGTGTCATG
ACCACCCACACCCGCAAGCCCGAGGAGATCGGCTGGGGCAAGCTCGGGGC
GACCTACCTGTGCGAGTCCACGGGCGCTTTCTTGACCAAGGAGACCTGCC
AGGTGCACATTGACGGTGGCGCCAAGAAGGTGGTCATGTCCGCCCCCGCG
AAGGACGACTCCCAGGTCATCGTCATGGGTGTCAACGAGGAGGACTACGT
CGGCGCCAACATCCTCTCTTGCGCGTCCTGCACCACCAACGGCCTGGCCC
CCATCGTCAAGATCATCAACGACGAGTTCGGCATTGAGGAGGCGCTCATG
ACCACGGTGCACGCCTTCACCGCCACCCAGATGGTGGTCGACGGGTCCTC
CAAGAAGGATTGGCGAGGTGGCCGATCGGCCTCCGTGAACATCATCCCTT
CCTCCACCGGTGCCGCCAAGGCTGTAACCAAGGTGATCCCCTCCCTTAAG
GGCAAGCTCACCGGCATGGCCTTCCGTGTCCCCGTCCCCGACGTTTCGGT
CGTGGACCTGACTGCCCGTCTCTCTAAGCCCACCACCTATGAGGCCATCT
GCGCTGCTGTCAAGAAGGCTTCCGAGACCACTCACAAGGGCGTGGTCGGC
TACACTGAGCTTCCCATGGTCAGCCAGGACTTTGTTTCTGACTCCCGCTC
CACTATCTTCGATGCCGGTGCCGGTATTGCGCTCAACCCCCAGTTCGTGA
AGCTCGTGGCTTGGTACGACAACGAGTGGGGATACTCTTGCCGTGTGGTT
GACCTTATCAAGAAGGTCGCCAAGCACGACGGTGTTCAGCTCTAAATCTG
TTAGTTGCAACAGTAGCAGCAACAGCTGTAGTTTTTGTACGCGCAGTGCC
TTGTGCTAGGAGGGAGTAGCAGTAGTAGTAGCAGCAGCAGCAGCAGCGAC
AATTTTATGTGTAAGGCGTGGTCCTTGTGTGCTTTGTGTCTGCTTTGTCT
CTCGTGTGTCAAGAGGCATTCGTAGGGATTGGGATGGGGCTGCCCTTTTT
GATGTTTTCTTCTGCATGTGCAAAATAGTTGTTCTTCTCTTTTTTTTTTC
TTCTTTTCGGGGGAGGAATGGAGGGAGGGAGCGGCACTAGTGCGCGGAGA
ACCCATGTGTGACGTATGCTTTTTGTTTGTGGATGTGGTGAAAATGTAGG
AAGGAGAGGGAGGAGAAATAAATCCGTCACAAACAACAAACTAAAGAGAG
GGGGGGAAGACCAACTTTACGGAAAAAAAATACGTTCACTCCCGAAAAAA
ACCCGT
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protein sequence of NO27G00910.1

>NO27G00910.1-protein ID=NO27G00910.1-protein|Name=NO27G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MAPVQSTLIGALALAGSVSAFVTPSFKLNAVQHARANDVHMAVPIGINGF
GRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDV
EGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHI
DGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGANILSCASCTTNGLAPIVK
IINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTG
AAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAV
KKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVA
WYDNEWGYSCRVVDLIKKVAKHDGVQL*
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Synonyms
Publications