NO26G01260, NO26G01260 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01260 vs. NCBI_GenBank
Match: EWM23160.1 (heterogeneous nuclear [Nannochloropsis gaditana]) HSP 1 Score: 218.4 bits (555), Expect = 4.000e-53 Identity = 134/300 (44.67%), Postives = 170/300 (56.67%), Query Frame = 0
Query: 12 GIGVLDVVMMNKGECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVHQEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGI---VSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARSMIG 309
G+GVLDVVM +KGEC+VLF ++MDMQL LG+D QNMGRRYIEIF+AKR DYY+A+ Q E G +RR H + R + EG +++AA Y Q Q PQ H + + + + QGQ A P + REVAIAATE+AQNS ILK+RGLPFT + D++ FFE F V D+I ++LRADGR+TGEAFVSF+S +ARSAQ++KDRS LG+RYVELF TTPEELAR++ G
Sbjct: 120 GMGVLDVVMTSKGECIVLFNTLMDMQLGLGKDTQNMGRRYIEIFVAKRVDYYHAVRQRTEEGYYRRLHFRGDVHGFAWRTMRSQ-EGSFHDFNAALFYS----------------------------NQPYQHPQAHLQAHTLHRALQMTPYQQPSYQTVPGAGLGPATTGLADTERQGETGKLAARQGQNVAAPTIPREVAIAATERAQNSGILKLRGLPFTCSSTDIRDFFEGFTVLSDDIQLILRADGRLTGEAFVSFSSVEDARSAQQSKDRSMLGTRYVELFHTTPEELARALNG 390
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_015903074.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1 [Ziziphus jujuba] >XP_015903075.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 119.0 bits (297), Expect = 3.300e-23 Identity = 92/300 (30.67%), Postives = 127/300 (42.33%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F KR DYYNA+A EV EG++ +YH +P SR + EQ + +EILKMRGLPF++TK D+ FF +FN+ D IH+ R DG+ TGEA+V F+SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 81 GLDIVDVLLVNKNGRFSGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKREDYYNAVAA--EV----------------------NYEGIYDNDYH------------------------------------------------------------------------------------------------GSPPPSRSKRFSDKEQMEYTEILKMRGLPFSATKSDIVEFFGEFNLAEDRIHIACRPDGKATGEAYVEFSSAEEAKKAM-SKDKMTIGSRYVELFPSTPDEARRA 259
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_007156236.1 (hypothetical protein PHAVU_003G269800g [Phaseolus vulgaris] >ESW28230.1 hypothetical protein PHAVU_003G269800g [Phaseolus vulgaris]) HSP 1 Score: 114.4 bits (285), Expect = 8.100e-22 Identity = 87/300 (29.00%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+DFN+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 79 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFQVTKSQIVEFFKDFNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 258
BLAST of NO26G01260 vs. NCBI_GenBank
Match: KOM32140.1 (hypothetical protein LR48_Vigan01g169600 [Vigna angularis]) HSP 1 Score: 114.4 bits (285), Expect = 8.100e-22 Identity = 87/300 (29.00%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+DFN+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 72 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFQVTKSQIVEFFKDFNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 251
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_017412023.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X1 [Vigna angularis] >BAT75304.1 hypothetical protein VIGAN_01314500 [Vigna angularis var. angularis]) HSP 1 Score: 114.4 bits (285), Expect = 8.100e-22 Identity = 87/300 (29.00%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+DFN+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 79 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFQVTKSQIVEFFKDFNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 258
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_017412024.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X2 [Vigna angularis]) HSP 1 Score: 114.4 bits (285), Expect = 8.100e-22 Identity = 87/300 (29.00%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+DFN+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 48 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFQVTKSQIVEFFKDFNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 227
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_017412025.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X3 [Vigna angularis]) HSP 1 Score: 114.4 bits (285), Expect = 8.100e-22 Identity = 87/300 (29.00%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+DFN+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 35 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFQVTKSQIVEFFKDFNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 214
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_014505778.1 (heterogeneous nuclear ribonucleoprotein H isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 113.2 bits (282), Expect = 1.800e-21 Identity = 86/300 (28.67%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+D+N+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 79 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFLVTKSQIVEFFKDYNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 258
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_014505779.1 (heterogeneous nuclear ribonucleoprotein H3 isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 113.2 bits (282), Expect = 1.800e-21 Identity = 86/300 (28.67%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+D+N+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 48 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFLVTKSQIVEFFKDYNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 227
BLAST of NO26G01260 vs. NCBI_GenBank
Match: XP_014505780.1 (heterogeneous nuclear ribonucleoprotein H isoform X3 [Vigna radiata var. radiata]) HSP 1 Score: 113.2 bits (282), Expect = 1.800e-21 Identity = 86/300 (28.67%), Postives = 123/300 (41.00%), Query Frame = 0
Query: 12 GIGVLDVVMMNK-----GECMVLFRSVMDMQLALGRDRQNMGRRYIEIFIAKRFDYYNAIAQNWEVGRHRRPHHHYHPDALSERAPGGEREGVH-QEYHAAQLYHXXXXXXXXXXXXXXXXXXXXXXLPHQLLQQDVQMPQPHXXXXGIVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQGQAAATPGVSREVAIAATEQAQNSEILKMRGLPFTSTKLDVQVFFEDFNVQLDNIHVVLRADGRMTGEAFVSFASAMEARSAQKAKDRSTLGSRYVELFRTTPEELARS 306
G+ ++DV+++NK GE V+F M ++ AL RDRQNMGRRY+E+F K+ DYYNA+A EG++ +YH ++P SR + +Q + +EILKMRGLPF TK + FF+D+N+ D +H+ R DG+ TGEA+V F SA EA+ A +KD+ T+GSRYVELF +TP+E R+
Sbjct: 35 GLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEINY------------------------EGIYDNDYH-----------------------------------------------------------------------------------------------GSSPPPSRSKRFSDKDQMEYTEILKMRGLPFLVTKSQIVEFFKDYNLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAM-SKDKMTIGSRYVELFPSTPDEARRA 214 The following BLAST results are available for this feature:
BLAST of NO26G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01260 ID=NO26G01260|Name=NO26G01260|organism=Nannochloropsis oceanica|type=gene|length=3750bpback to top protein sequence of NO26G01260.1 >NO26G01260.1-protein ID=NO26G01260.1-protein|Name=NO26G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bpback to top protein sequence of NO26G01260.2 >NO26G01260.2-protein ID=NO26G01260.2-protein|Name=NO26G01260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=396bpback to top Synonyms
Publications
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