NO26G00620, NO26G00620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO26G00620 vs. NCBI_GenBank
Match: XP_005855946.1 (mrna processing protein [Nannochloropsis gaditana CCMP526] >EKU20419.1 mrna processing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73 Identity = 178/342 (52.05%), Postives = 218/342 (63.74%), Query Frame = 0 Query: 46 PEATKVAQQGREEAIWISKPTNSRLIQPPTQTPLSVAAAAQVDGSTSHALEEYLRQRNWAEPSTTALLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAHLHLHMVGPELPQAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADV------------------------XXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALL--GAQGKD-------VEWLVGPERNPFASRKCLIDPLDTRHVLAANEYVGVFRWR 355 P A A++ REEA+W+SKPTNSRLIQPP + A S LEEY+R+R WA +T LL SPG+R+LSHLLSYP+TLAHYLP L + + K H+AI+GARAE +LP AWW E+LCL+ LHMVGPE+ ++ E+ V LD RQLW+H+ G+YHV+ D+ XXXXXXXXXXXXXXXXXXXXXXX + A VL+NPGLGHPAL AW PTL L+A + LWTAHS EDRDRD+A L GA+ K+ VEWLV P NPFASRK ++DPL+ +HVLAAN++ G FRWR Sbjct: 7 PTAAMAAREAREEALWLSKPTNSRLIQPPAPSAFHAAGEGPSSTSPPPTLEEYVRRRQWAGKNTETLLASPGLRVLSHLLSYPLTLAHYLPSLH-GSDTSSAKAGSPGEVCHVAIIGARAEATLPDAWWQEVLCLQPGLFCLHMVGPEVYDPATRAGRES---VRLDPQRQLWMHRRQGMYHVLAPDLVSSFRLSPSSSPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSAAVLFNPGLGHPALAKAWKPTLQCLQAAKVPILWTAHSAEDRDRDVAWLSGGAEDKESGFGDLRVEWLVAPGPNPFASRKLVVDPLNAQHVLAANKFAGTFRWR 344
BLAST of NO26G00620 vs. NCBI_GenBank
Match: OQR83239.1 (hypothetical protein ACHHYP_14924 [Achlya hypogyna]) HSP 1 Score: 105.5 bits (262), Expect = 3.400e-19 Identity = 82/246 (33.33%), Postives = 107/246 (43.50%), Query Frame = 0 Query: 113 LDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAHLHLHMVGPELP--QAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKDVE----WLVGPERNPFASRKCLIDPLDTRHVLAANEYVGVFR 353 LD +R+LS SYPMTL HYLP L AK D + E L +LGARAE +P W L + L L M+G +P + + A+ A HV + L+H + DA VL+NPGLGHPALRA W PTL A R+ L T S D RD+ L A ++ + + NPF SRK +DPL + N++ V R Sbjct: 100 LDEAALRVLSAAYSYPMTLRHYLPALD-LAKTNDLRPE-------LFVLGARAEAMMPRHMWS---VLAPSQLRLKMIGNHVPVLRKLPPEGADDAVHVSFCSQ----------LFHEMPTVAAP-----------------------DAFVLFNPGLGHPALRALWAPTLRLALASRKPLLITCFSATDLHRDLEALDAMAAELPGRLVFAQTAQLNPFQSRKATVDPLALLAPVQTNQFALVVR 301
BLAST of NO26G00620 vs. NCBI_GenBank
Match: XP_008605482.1 (hypothetical protein SDRG_01719 [Saprolegnia diclina VS20] >EQC40638.1 hypothetical protein SDRG_01719 [Saprolegnia diclina VS20]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 79/247 (31.98%), Postives = 108/247 (43.72%), Query Frame = 0 Query: 112 LLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAHLHLHMVGPELP--QAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKD----VEWLVGPERNPFASRKCLIDPLDTRHVLAANEYVGVFR 353 L D IR+LS SYPMTL HYLP L A+ +E A L +LGARAE ++P W L +HL MVG +P + + +++ A HV + L+H + +A VL+NPGLGHPAL + W PTL+ A R+ L T S D RD+ L A + + + + NPF SRK +DP + N+Y V R Sbjct: 107 LSDPAAIRLLSAAYSYPMTLHHYLPDLCAAS------EERVA----LYVLGARAEATMPKHMWG---VLNPHRVHLKMVGNHVPVFRKLPPESSDDAVHVSFSS----------SLFHEMAPSTPSP----------------------NAFVLFNPGLGHPALSSLWAPTLSMALATRKPLLITCFSAIDLHRDLTALEASATTLSGRLHYTISAQLNPFQSRKATVDPAALLAPVHTNQYAMVVR 308
BLAST of NO26G00620 vs. NCBI_GenBank
Match: GAX98728.1 (Hypothetical protein PINS_006574 [Pythium insidiosum]) HSP 1 Score: 99.8 bits (247), Expect = 1.900e-17 Identity = 76/242 (31.40%), Postives = 108/242 (44.63%), Query Frame = 0 Query: 112 LLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAH-LHLHMVGPELPQAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKDVEWLVGPERNPFASRKCLIDPLDTRHVLAANEYVGVFR 353 L D +R++S ++ MTL+ +L A A T E A +H ++GARAE ++P W ELL + H + +VG +P + + +L L GLYH + + DA VL+NPG+GHP L W PTL L A + L T+ SQ D +RD+A L VE+LV P NPF SR +DP D + N +V V + Sbjct: 33 LRDESAVRLVSAAYTFVMTLSAFLD-----ALAPLTTPEAAPVRLH--VIGARAEATMPRHIWQELLVQQPDHRFEIKLVGDHVPPMRHQQQS------------RLHLENCPGLYHEVKIE-----------------------QPADAFVLFNPGIGHPRLHRLWRPTLEXLVASGKPVLLTSFSQRDLERDLAAL----PPVEFLVEPRLNPFGSRMYQLDPSDVFAPIQTNRHVMVIK 228
BLAST of NO26G00620 vs. NCBI_GenBank
Match: XP_024572244.1 (hypothetical protein PHALS_00202 [Plasmopara halstedii] >CEG35875.1 hypothetical protein PHALS_00202 [Plasmopara halstedii]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 79/276 (28.62%), Postives = 119/276 (43.12%), Query Frame = 0 Query: 82 AAAAQVDGSTSHALEEYLRQRNWAE------PSTTALLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRA-HLHLHMVGPELPQAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALL-----GAQGKDVEWLVGPERNPFASRKCLIDPLDTRHVLAAN 346 A Q D S + + +W E P L D +R+LS SY MTL+ +L L A KK + L I+GARAE ++P W +L ++ +VG +P A++ + E+ ++ L +GLYH VA DA V+YNPG+GHP LR +W PT+ + A R+ L T+ + ED+ RDI L G +++ E+NPF S K +DP + + + N Sbjct: 86 AEVLQPDRRDSIQWKNNIHLTSWTEYFKLYQPDDHWLKDVRALRMLSSAYSYVMTLSKFLSDLLAPYHADSEKK------VDLHIIGARAEATMPRYLWDDLSFFHPGWQFNITLVGNHVPVMPARNKTRSKENTLVQ------LEMTNGLYHESVA---------------------RKLTTPDAFVMYNPGIGHPYLRESWEPTVLSVLASRKPMLITSFNLEDQQRDIKALQKLVAKLHGYKLQFRSNAEQNPFRSLKLQVDPRNVKLPIQTN 328
BLAST of NO26G00620 vs. NCBI_GenBank
Match: XP_009829511.1 (hypothetical protein H257_06095 [Aphanomyces astaci] >ETV80564.1 hypothetical protein H257_06095 [Aphanomyces astaci]) HSP 1 Score: 96.3 bits (238), Expect = 2.100e-16 Identity = 80/248 (32.26%), Postives = 114/248 (45.97%), Query Frame = 0 Query: 103 NWAEPSTTA-----LLDSPGI-RILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAHLHLHMVGPELPQAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKDVEWLVGPERNPFASRKCLIDPLDTRHVLAA 345 +WA+ A L P + R++S SYPMTL HYLP L + ++ A + ILGARAE ++P W L R L + ++G +P V +S + L+ L H+GLYH + A VL+NPGLGHPALR+ W PTLA++ R L T+ S ED RD+ +L G+ ++ NPF S K IDP+ H++A+ Sbjct: 103 SWADMLADAGVSSHLAHDPAVTRLISAAYSYPMTLRHYLPALLPSISSS------IDAAHRVYILGARAEATMPRHLWTPLHPWR---LDISLIGNHVP--VMRSTPPSPPSSSLN------LSFHNGLYHDL------------------------DLPSPHAFVLFNPGLGHPALRSQWRPTLARVLESHRPILLTSFSDEDLQRDVRVLETAGRRID----IAENPFGSTKASIDPM---HLVAS 302
BLAST of NO26G00620 vs. NCBI_GenBank
Match: XP_012210328.1 (hypothetical protein SPRG_14817 [Saprolegnia parasitica CBS 223.65] >KDO18980.1 hypothetical protein SPRG_14817 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 95.9 bits (237), Expect = 2.700e-16 Identity = 78/247 (31.58%), Postives = 105/247 (42.51%), Query Frame = 0 Query: 112 LLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAHLHLHMVGPELP--QAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKD----VEWLVGPERNPFASRKCLIDPLDTRHVLAANEYVGVFR 353 L D +R+LS SYPMTL HYLP L T ++ AA L +LGARAE ++P W L +HL MVG +P + + ++ A HV + L+H + DA VL+NPGLGHPAL A W P+L+ A R+ L T S D RD+ L + + + NPF SRK +DP + N+Y V R Sbjct: 40 LSDPAAMRLLSAAYSYPMTLRHYLPAL------CATSEKRAA----LYVLGARAEATMPKHMWG---VLNPHRVHLKMVGNHVPVFRKLPPEDSDDAAHVSFCS----------SLFHEMAPSTPSP----------------------DAFVLFNPGLGHPALSALWAPSLSMALATRKPLLITCFSAIDLHRDLTALETSASTLRGRLHFTRSAQLNPFQSRKATVDPAALLAPVHTNQYAMVVR 241
BLAST of NO26G00620 vs. NCBI_GenBank
Match: OQS05777.1 (hypothetical protein THRCLA_02129 [Thraustotheca clavata]) HSP 1 Score: 94.7 bits (234), Expect = 6.000e-16 Identity = 77/272 (28.31%), Postives = 118/272 (43.38%), Query Frame = 0 Query: 90 STSHALEEYLRQRNWAEPSTTALLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRAHLHLHMVGPELP--QAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKDVEWLVGPER----NPFASRKCLIDPLDTRHVLAANEYVGVFRWRE 356 ST L + ++ E + + ++ GIR+LS SY MTL ++LP L D + + +LGARAE ++P W L R LH+ MVG +P + + + A HV ++ LYH + DA+VL+NPGLGHP L+ W P+L + L T S +D RD+ L + ++ + + NPF SRK ++DPLD ++ + N+Y V R E Sbjct: 456 STRLTLLDCATWEDFLEINAVDIKNAAGIRLLSAAFSYVMTLRYHLPAL--GVNENDRSQ--------VFMLGARAEATMPKHMWNHLNPYR---LHIKMVGNHVPVIRKLPPESPNDAVHVSFESK----------LYHELPTSTTTP----------------------DAIVLFNPGLGHPHLKNLWAPSLNLALTTYKPLLITCFSAKDLHRDLEALDNAAESLDGTLNFTKTAGINPFQSRKIIVDPLDPQNPIQTNQYSMVVRLEE 682
BLAST of NO26G00620 vs. NCBI_GenBank
Match: CBN78301.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-14 Identity = 95/344 (27.62%), Postives = 128/344 (37.21%), Query Frame = 0 Query: 46 PEATKVAQQGREEAIWISKPTNSRLI-QPPTQTPLSVAAAAQVDGSTSHALEEYLRQRNWAEPSTTALLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRR--AHLHLHMVGPE--LPQAVAKSA----------------AEAAEHVVLDADRQLWLHKHHGLYH---VIVADV-----------XXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLGAQGKD------------------VEWLVGPERNPFASRKCLIDPL 337 PEA K QG E W P +++ QPP + AA+ +LE YL+ R W + P R LSHLL+YP+TLA L + + T + + + LGARAE ++P A+W E L + L LH++GPE LP V +A + A V W G V A+ DA VL+NPGLGHP LR W L +L A + + + HS +D DRD LL G + +G + NPF S DPL Sbjct: 36 PEARK---QGEENKAWAKTPGARQVLDQPPFEGEDGDIGAARASACMLESLEGYLQARRW------PYREEPARRFLSHLLTYPLTLAAGLREARIKQQPEYTNSDGRRNKLAVVCLGARAESTMPPAYWREALFALPDVSRLSLHLIGPELGLPPGVVAAARPGTAACDGAGTIGPISTAVISVGARTADIAWTRAMVGSSAGGCVTGAEQKPEAAAGSAVGSGRGAATEPGGAGAVEAAEEAVEAADAFVLFNPGLGHPHLRQGWDGALKRLLATGKPIVVSCHSPKDLDRDTRLLREAGAEPCCPPSAANAXXXXXXXXXXXXLGAKENPFRSLMASEDPL 370
BLAST of NO26G00620 vs. NCBI_GenBank
Match: POM70997.1 (Mss51 like protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-14 Identity = 74/253 (29.25%), Postives = 106/253 (41.90%), Query Frame = 0 Query: 107 PSTTALLDSPGIRILSHLLSYPMTLAHYLPHLQKAAKATDTKKEEAATAMHLAILGARAEVSLPSAWWMELLCLRRA-HLHLHMVGPELPQAVAKSAAEAAEHVVLDADRQLWLHKHHGLYHVIVADVXXXXXXXXXXXXXXXXXXXXXXXXLDAVVLYNPGLGHPALRAAWTPTLAKLRAERRSALWTAHSQEDRDRDIALLG--------AQGKDVEWLVGPERNPFASRKCLIDPLDTRHVLAANEYVGV 351 P L D +R+LS SY MTL+ +LP L + DT K E +H ++GARAE +P W EL + +VG +P A+ + + + L +GLYH I DA VLYNPG+GHP LR +W PTL + A + L T+ S ED+ RDI L + ++ + ++N F S K +DP + + N V V Sbjct: 144 PDECWLEDPKALRLLSSAYSYVMTLSRFLPELME----VDTMKSEKKFDIH--VIGARAEAMMPRYLWDELSFFHPGRQFGIKLVGDHVPVMSARKKTPTTRE---NENEFIQLEMINGLYHKI---------------------EETKLGTPDAFVLYNPGVGHPHLRESWEPTLQAVLASGKPVLITSFSLEDQQRDITALQELVANSPVLKQHELRFRCRAKQNSFRSLKYQLDPSNVDTPIQTNNRVMV 366 The following BLAST results are available for this feature:
BLAST of NO26G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00620 ID=NO26G00620|Name=NO26G00620|organism=Nannochloropsis oceanica|type=gene|length=1068bpback to top protein sequence of NO26G00620.1 >NO26G00620.1-protein ID=NO26G00620.1-protein|Name=NO26G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bpback to top Synonyms
Publications
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